LOC100293055 22205

Name: LOC100293055	Sequence: fasta or formatted (1073aa)		NCBI GI: 239754955
Description: PREDICTED: similar to COL22A1 protein		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 68 2 C cysteine 1.3 14 1 D aspartate 4.0 43 1 E glutamate 5.9 63 2 F phenylalanine 1.7 18 2 G glycine 24.7 265 2 H histidine 1.6 17 1 I isoleucine 1.9 20 1 K lysine 4.8 51 2 L leucine 7.6 82 2 M methionine 1.0 11 1 N asparagine 1.2 13 1 P proline 18.6 200 2 Q glutamine 3.9 42 1 R arginine 4.3 46 2 S serine 5.2 56 2 T threonine 2.5 27 2 V valine 2.5 27 1 W tryptophan 0.3 3 1 Y tyrosine 0.7 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to COL22A1 protein COL22A1 0.768 collagen, type XXII, alpha 1 COL4A5 0.299 type IV collagen alpha 5 isoform 3 precursor COL16A1 0.299 alpha 1 type XVI collagen precursor COL4A5 0.299 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.299 type IV collagen alpha 5 isoform 1 precursor COL1A1 0.298 alpha 1 type I collagen preproprotein COL3A1 0.290 collagen type III alpha 1 preproprotein COL19A1 0.290 alpha 1 type XIX collagen precursor COL5A1 0.288 alpha 1 type V collagen preproprotein COL2A1 0.285 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.285 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A1 0.285 alpha 1 type IV collagen preproprotein COL11A1 0.282 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.282 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.282 alpha 1 type XI collagen isoform A preproprotein [Ho... COL7A1 0.280 alpha 1 type VII collagen precursor COL5A2 0.278 alpha 2 type V collagen preproprotein COL11A2 0.277 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.277 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.277 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL5A3 0.273 collagen, type V, alpha 3 preproprotein COL4A3 0.272 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.272 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.272 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.272 alpha 3 type IV collagen isoform 1 precursor COL4A4 0.268 alpha 4 type IV collagen precursor COL1A2 0.268 alpha 2 type I collagen COL27A1 0.267 collagen, type XXVII, alpha 1 COL24A1 0.259 collagen, type XXIV, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.