LOC392555 21221

Name: LOC392555	Sequence: fasta or formatted (424aa)		NCBI GI: 239752435
Description: PREDICTED: similar to melanoma antigen family C, 2		Not currently referenced in the text
Other entries for this name: alt mRNA {424aa} PREDICTED: similar to melanoma antigen family C, 2 alt prot {347aa} PREDICTED: similar to melanoma antigen family C, 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 31 2 C cysteine 2.6 11 1 D aspartate 4.0 17 2 E glutamate 10.4 44 5 F phenylalanine 4.2 18 1 G glycine 4.5 19 2 H histidine 1.7 7 1 I isoleucine 5.7 24 2 K lysine 3.8 16 1 L leucine 8.7 37 2 M methionine 1.9 8 2 N asparagine 2.4 10 1 P proline 7.8 33 2 Q glutamine 3.1 13 1 R arginine 2.1 9 2 S serine 13.4 57 10 T threonine 4.7 20 2 V valine 6.6 28 2 W tryptophan 2.4 10 1 Y tyrosine 2.8 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to melanoma antigen family C, 2 ... LOC392555 1.000 PREDICTED: similar to melanoma antigen family C, 2 ... LOC392555 0.808 PREDICTED: similar to melanoma antigen family C, 2 ... MAGEC2 0.545 melanoma antigen family C, 2 LOC100292575 0.516 PREDICTED: similar to melanoma antigen family C, 2 ... MAGEC3 0.371 melanoma antigen family C, 3 isoform 2 MAGEC1 0.353 melanoma antigen family C, 1 MAGEA10 0.273 melanoma antigen family A, 10 MAGEA10 0.273 melanoma antigen family A, 10 MAGEC3 0.255 melanoma antigen family C, 3 isoform 1 MAGEB10 0.242 melanoma antigen family B, 10 MAGEB4 0.231 melanoma antigen family B, 4 MAGEB18 0.230 melanoma antigen family B, 18 MAGEB1 0.217 melanoma antigen family B, 1 MAGEB1 0.217 melanoma antigen family B, 1 MAGEB1 0.217 melanoma antigen family B, 1 MAGEA9B 0.216 melanoma antigen family A, 9 -like MAGEA9 0.216 melanoma antigen family A, 9 MAGEB17 0.214 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.214 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.214 PREDICTED: melanoma antigen family B, 17 MAGEB16 0.213 melanoma antigen family B, 16 MAGEB2 0.212 melanoma antigen family B, 2 MAGEA11 0.206 melanoma antigen family A, 11 isoform b MAGEA11 0.206 melanoma antigen family A, 11 isoform a LOC392435 0.200 PREDICTED: similar to hCG1811022 LOC392435 0.200 PREDICTED: similar to hCG1811022 LOC392435 0.200 PREDICTED: similar to hCG1811022 MAGEB3 0.196 melanoma antigen family B, 3 MAGEA8 0.190 melanoma antigen family A, 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.