Guide to the Human Genome
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Name: GLYCTK Sequence: fasta or formatted (523aa) NCBI GI: 31543063
Description:

glycerate kinase isoform 1

Referenced in:

Glycolysis

Other entries for this name:
alt prot [234aa] glycerate kinase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         74           4
 C cysteine            1.0          5           2
 D aspartate           4.0         21           2
 E glutamate           5.4         28           2
 F phenylalanine       1.9         10           2
 G glycine             9.8         51           3
 H histidine           3.1         16           1
 I isoleucine          2.9         15           2
 K lysine              1.9         10           1
 L leucine            15.5         81           3
 M methionine          2.3         12           1
 N asparagine          2.1         11           1
 P proline             5.4         28           2
 Q glutamine           6.1         32           2
 R arginine            6.3         33           2
 S serine              5.2         27           2
 T threonine           4.2         22           1
 V valine              7.3         38           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycerate kinase isoform 1 
GLYCTK                0.317   glycerate kinase isoform 2 
SRPRB                 0.009   signal recognition particle receptor, beta subunit [...
LOC100291781          0.008   PREDICTED: hypothetical protein XP_002344871 
LOC100290673          0.008   PREDICTED: hypothetical protein XP_002347567 
LOC100286890          0.008   PREDICTED: hypothetical protein XP_002343388 
SLC26A11              0.007   solute carrier family 26, member 11 
UGT1A4                0.007   UDP glycosyltransferase 1 family, polypeptide A4 prec...
LOC100293526          0.006   PREDICTED: hypothetical protein 
LOC100291411          0.006   PREDICTED: hypothetical protein XP_002348184 
LOC100288664          0.006   PREDICTED: hypothetical protein XP_002343845 
RBP3                  0.006   retinol-binding protein 3 precursor 
MYO1C                 0.005   myosin IC isoform b 
MYO1C                 0.005   myosin IC isoform a 
MYO1C                 0.005   myosin IC isoform c 
LOC100128598          0.005   PREDICTED: hypothetical protein 
LOC100128598          0.005   PREDICTED: hypothetical protein 
LOC100128598          0.005   PREDICTED: hypothetical protein 
CNGB1                 0.005   cyclic nucleotide gated channel beta 1 isoform b [H...
CNGB1                 0.005   cyclic nucleotide gated channel beta 1 isoform a [H...
ZFHX2                 0.005   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.005   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.005   PREDICTED: zinc finger homeobox 2 
SRCAP                 0.005   Snf2-related CBP activator protein 
LOC100292758          0.004   PREDICTED: hypothetical protein 
LOC100128960          0.004   PREDICTED: similar to paraneoplastic antigen MA2 [H...
LOC100128960          0.004   PREDICTED: similar to Putative paraneoplastic antig...
SCAF1                 0.004   SR-related CTD-associated factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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