LOC100128960 9141

Name: LOC100128960	Sequence: fasta or formatted (340aa)		NCBI GI: 169216514
Description: PREDICTED: similar to paraneoplastic antigen MA2		Referenced in: Additional Brain Proteins Testes and Sperm
Other entries for this name: alt prot [340aa] PREDICTED: similar to Putative paraneoplastic antigen-like protei...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.2 55 2 C cysteine 1.8 6 1 D aspartate 4.7 16 2 E glutamate 13.2 45 4 F phenylalanine 2.4 8 1 G glycine 13.2 45 2 H histidine 0.9 3 1 I isoleucine 2.4 8 1 K lysine 2.4 8 1 L leucine 9.7 33 2 M methionine 1.8 6 1 N asparagine 1.8 6 1 P proline 3.8 13 1 Q glutamine 3.5 12 1 R arginine 7.4 25 2 S serine 4.4 15 1 T threonine 2.4 8 1 V valine 5.3 18 2 W tryptophan 2.1 7 1 Y tyrosine 0.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to paraneoplastic antigen MA2 [H... LOC100128960 0.998 PREDICTED: similar to Putative paraneoplastic antig... LOC649201 0.255 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.255 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.255 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649238 0.232 PREDICTED: similar to hCG1645335 LOC649238 0.232 PREDICTED: similar to hCG1645335 LOC100287500 0.148 PREDICTED: hypothetical protein XP_002343900 PNMA6A 0.148 paraneoplastic antigen like 6A LOC100287466 0.147 PREDICTED: hypothetical protein XP_002343899 LOC100287428 0.147 PREDICTED: hypothetical protein XP_002343898 PNMA3 0.130 paraneoplastic cancer-testis-brain antigen PNMAL1 0.128 PNMA-like 1 isoform b PNMAL1 0.128 PNMA-like 1 isoform a PNMA2 0.118 paraneoplastic antigen MA2 PNMA5 0.113 paraneoplastic antigen like 5 PNMA5 0.113 paraneoplastic antigen like 5 PNMA5 0.113 paraneoplastic antigen like 5 PNMA1 0.110 paraneoplastic antigen MA1 PNMAL2 0.102 PNMA-like 2 MOAP1 0.101 modulator of apoptosis 1 COL1A1 0.063 alpha 1 type I collagen preproprotein COL1A2 0.061 alpha 2 type I collagen COL11A1 0.060 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.060 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.060 alpha 1 type XI collagen isoform A preproprotein [Ho... COL6A1 0.060 collagen, type VI, alpha 1 precursor COL3A1 0.057 collagen type III alpha 1 preproprotein COL5A2 0.057 alpha 2 type V collagen preproprotein COL2A1 0.057 collagen, type II, alpha 1 isoform 1 precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.