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Search of human proteins with 239757412
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo
sapiens]
(564 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo ... 1213 0.0
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 897 0.0
gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo ... 697 0.0
gi|239751880 PREDICTED: hypothetical protein XP_002348020 [Homo ... 45 2e-04
gi|239746369 PREDICTED: hypothetical protein XP_002343699 [Homo ... 45 2e-04
gi|148747864 JAW1-related protein isoform a [Homo sapiens] 42 0.001
gi|154091332 JAW1-related protein isoform b [Homo sapiens] 42 0.001
gi|148728182 JAW1-related protein isoform b [Homo sapiens] 42 0.001
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 41 0.003
gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens] 39 0.010
gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo ... 39 0.010
gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo ... 39 0.010
gi|154091334 JAW1-related protein isoform c [Homo sapiens] 39 0.017
gi|206597556 kelch domain containing 7B [Homo sapiens] 37 0.048
gi|194272140 dendrin [Homo sapiens] 36 0.11
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 35 0.14
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 35 0.14
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ... 35 0.24
gi|148727255 microtubule associated serine/threonine kinase fami... 34 0.31
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 34 0.41
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens] 34 0.41
gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens] 33 0.53
gi|42476028 ATPase family, AAA domain containing 3A [Homo sapiens] 33 0.53
gi|153792042 G protein-coupled receptor 178 [Homo sapiens] 33 0.53
gi|24475586 ependymin related protein 1 precursor [Homo sapiens] 33 0.53
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 33 0.69
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 33 0.69
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 33 0.69
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] 33 0.91
>gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo
sapiens]
Length = 564
Score = 1213 bits (3139), Expect = 0.0
Identities = 564/564 (100%), Positives = 564/564 (100%)
Query: 1 MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERK 60
MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERK
Sbjct: 1 MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERK 60
Query: 61 PAGDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW 120
PAGDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW
Sbjct: 61 PAGDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW 120
Query: 121 AGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPR 180
AGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPR
Sbjct: 121 AGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPR 180
Query: 181 LPGARASEQLLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFL 240
LPGARASEQLLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFL
Sbjct: 181 LPGARASEQLLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFL 240
Query: 241 CWLELDCGHLLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTA 300
CWLELDCGHLLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTA
Sbjct: 241 CWLELDCGHLLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTA 300
Query: 301 APSPSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRA 360
APSPSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRA
Sbjct: 301 APSPSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRA 360
Query: 361 PRHLEGERGLEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLV 420
PRHLEGERGLEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLV
Sbjct: 361 PRHLEGERGLEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLV 420
Query: 421 LCVKLFPQTPQWDDHLKARPHWPQMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRN 480
LCVKLFPQTPQWDDHLKARPHWPQMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRN
Sbjct: 421 LCVKLFPQTPQWDDHLKARPHWPQMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRN 480
Query: 481 DLPHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNP 540
DLPHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNP
Sbjct: 481 DLPHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNP 540
Query: 541 KPTHGLFKGQGLPPQVTHFAGDLP 564
KPTHGLFKGQGLPPQVTHFAGDLP
Sbjct: 541 KPTHGLFKGQGLPPQVTHFAGDLP 564
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 897 bits (2318), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERK 60
MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERK
Sbjct: 1 MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERK 60
Query: 61 PAGDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW 120
PAGDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW
Sbjct: 61 PAGDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW 120
Query: 121 AGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPR 180
AGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPR
Sbjct: 121 AGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPR 180
Query: 181 LPGARASEQLLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFL 240
LPGARASEQLLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFL
Sbjct: 181 LPGARASEQLLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFL 240
Query: 241 CWLELDCGHLLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTA 300
CWLELDCGHLLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTA
Sbjct: 241 CWLELDCGHLLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTA 300
Query: 301 APSPSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRA 360
APSPSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRA
Sbjct: 301 APSPSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRA 360
Query: 361 PRHLEGERGLEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRL 419
PRHLEGERGLEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRL
Sbjct: 361 PRHLEGERGLEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRL 419
Score = 262 bits (670), Expect = 5e-70
Identities = 120/121 (99%), Positives = 121/121 (100%)
Query: 444 QMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRNDLPHSPHSYWAAGAGAAGPGFSP 503
+MKARRPVCTLRWICSREERLKALGQSGHWSRDDHRNDLPHSPHSYWAAGAGAAGPGFSP
Sbjct: 824 RMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRNDLPHSPHSYWAAGAGAAGPGFSP 883
Query: 504 APSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKPTHGLFKGQGLPPQVTHFAGDL 563
APSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKPTHGLFKGQGLPPQVTHFAGDL
Sbjct: 884 APSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKPTHGLFKGQGLPPQVTHFAGDL 943
Query: 564 P 564
P
Sbjct: 944 P 944
>gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo
sapiens]
Length = 522
Score = 697 bits (1798), Expect = 0.0
Identities = 341/404 (84%), Positives = 347/404 (85%), Gaps = 26/404 (6%)
Query: 74 LPPHVPSLLSNLSAGRRRQRVDS----HPVAAVQQLSGWGAADDEEFLSGWAGGRRLRQP 129
LPP +P N + G R + HP LSGWGAADDEEFLSGWAGGRRLRQP
Sbjct: 3 LPPSLPPGKQN-TGGETRVFISKPSLRHPAPPRLALSGWGAADDEEFLSGWAGGRRLRQP 61
Query: 130 RRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPRLPGARASEQ 189
RRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPRLPGARASEQ
Sbjct: 62 RRKCFYLLYAESSLFAIGPAQHQHALQALVRLECLKEDILDHTSAGLAIPRLPGARASEQ 121
Query: 190 LLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFLCWLELDCGH 249
LLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFLCWLELDCGH
Sbjct: 122 LLSCPALNNQQVGCLSSHSSPTGIGELAGHGLELDRGHLLCWLELDRGYFLCWLELDCGH 181
Query: 250 LLRWLELDRGYFWGWSEGLELHPTHFLAWQPDHSRPLARFPHCPRALPCTAAPSPSTGGG 309
LLRWLELDRGYFWGW AWQPDHSRPLARFPHCPRALPCTAAPSPSTGGG
Sbjct: 182 LLRWLELDRGYFWGW------------AWQPDHSRPLARFPHCPRALPCTAAPSPSTGGG 229
Query: 310 QQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRAPRHLEGERG 369
QQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRAPRHLEGERG
Sbjct: 230 QQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRAPRHLEGERG 289
Query: 370 LEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQT 429
LEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRL +C KL PQT
Sbjct: 290 LEVGQDVDILGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLEVCAKLLPQT 349
Query: 430 PQ-WDDHLKARPHWPQMKARRPVCTLRWICSREERLKALGQSGH 472
PQ W +KARRPVCT W+ SREERLKAL S H
Sbjct: 350 PQAWG--------LSPVKARRPVCTRWWMASREERLKALPHSPH 385
Score = 101 bits (252), Expect = 2e-21
Identities = 48/53 (90%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Query: 379 LGGWRGPRSSHRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431
L GWR R S RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ
Sbjct: 470 LWGWRC-RCSSRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 521
>gi|239751880 PREDICTED: hypothetical protein XP_002348020 [Homo
sapiens]
Length = 146
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/83 (39%), Positives = 36/83 (43%), Gaps = 21/83 (25%)
Query: 395 VKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQWDDHLKARPHWPQMKARRPV--- 451
VK Q G GRSP CTRW C +P K R H Q K RRP
Sbjct: 64 VKRSRQMGHWYGRSPECTRWWCA----------SSPA---SRKRRGHSGQRKGRRPAWML 110
Query: 452 -CTLRWICSREERLKALGQSGHW 473
C RW+ ERLK L Q+ HW
Sbjct: 111 QCRRRWL----ERLKVLPQTLHW 129
Score = 37.0 bits (84), Expect = 0.048
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 379 LGGWRGPRSSHRLEEWV-------KVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431
+G W G RS W K G SGQRKGR P C RR + +K+ PQT
Sbjct: 70 MGHWYG-RSPECTRWWCASSPASRKRRGHSGQRKGRRPAWMLQCRRRWLERLKVLPQTLH 128
Query: 432 W 432
W
Sbjct: 129 W 129
>gi|239746369 PREDICTED: hypothetical protein XP_002343699 [Homo
sapiens]
Length = 146
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/83 (39%), Positives = 36/83 (43%), Gaps = 21/83 (25%)
Query: 395 VKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQWDDHLKARPHWPQMKARRPV--- 451
VK Q G GRSP CTRW C +P K R H Q K RRP
Sbjct: 64 VKRSRQMGHWYGRSPECTRWWCA----------SSPA---SRKRRGHSGQRKGRRPAWML 110
Query: 452 -CTLRWICSREERLKALGQSGHW 473
C RW+ ERLK L Q+ HW
Sbjct: 111 QCRRRWL----ERLKVLPQTLHW 129
Score = 37.0 bits (84), Expect = 0.048
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 379 LGGWRGPRSSHRLEEWV-------KVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431
+G W G RS W K G SGQRKGR P C RR + +K+ PQT
Sbjct: 70 MGHWYG-RSPECTRWWCASSPASRKRRGHSGQRKGRRPAWMLQCRRRWLERLKVLPQTLH 128
Query: 432 W 432
W
Sbjct: 129 W 129
>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
Length = 903
Score = 42.0 bits (97), Expect = 0.001
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 2 PENGPRSLHP----GPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGER---GPG 54
PE P+ L P + L +P P E G TG S R + GP
Sbjct: 290 PETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP 349
Query: 55 EERERKPAGD--GRRAGDQRELPPHV--PSLLSNLS-------AGRRRQRVDSHPVAAVQ 103
+ R PAG+ G AG + ELPP V P LL LS G R Q+V
Sbjct: 350 ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKV--------- 400
Query: 104 QLSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLEC 163
L+ A++E+ +G AGG+ + P K F + + + + +H L L
Sbjct: 401 -LAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVG 459
Query: 164 LK 165
LK
Sbjct: 460 LK 461
>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 42.0 bits (97), Expect = 0.001
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 2 PENGPRSLHP----GPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGER---GPG 54
PE P+ L P + L +P P E G TG S R + GP
Sbjct: 208 PETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP 267
Query: 55 EERERKPAGD--GRRAGDQRELPPHV--PSLLSNLS-------AGRRRQRVDSHPVAAVQ 103
+ R PAG+ G AG + ELPP V P LL LS G R Q+V
Sbjct: 268 ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKV--------- 318
Query: 104 QLSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLEC 163
L+ A++E+ +G AGG+ + P K F + + + + +H L L
Sbjct: 319 -LAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVG 377
Query: 164 LK 165
LK
Sbjct: 378 LK 379
>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 42.0 bits (97), Expect = 0.001
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 2 PENGPRSLHP----GPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGER---GPG 54
PE P+ L P + L +P P E G TG S R + GP
Sbjct: 208 PETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP 267
Query: 55 EERERKPAGD--GRRAGDQRELPPHV--PSLLSNLS-------AGRRRQRVDSHPVAAVQ 103
+ R PAG+ G AG + ELPP V P LL LS G R Q+V
Sbjct: 268 ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKV--------- 318
Query: 104 QLSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLEC 163
L+ A++E+ +G AGG+ + P K F + + + + +H L L
Sbjct: 319 -LAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVG 377
Query: 164 LK 165
LK
Sbjct: 378 LK 379
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 40.8 bits (94), Expect = 0.003
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 1 MPENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCT--GRLWSFDKRRSNGERGPGEERE 58
+P R LHP + LP+SRP + QG STC+ G S S G RGPG R
Sbjct: 1308 VPLAAQRVLHPDEEAWLPYSRPSFLSRGQG-TSTCSTAGSNSSRGSSSSRGSRGPGRSRS 1366
Query: 59 RKPA-GDGRRAGDQRELPP 76
R + +R G +R P
Sbjct: 1367 RSQSRSQSQRPGQKRREEP 1385
Score = 30.4 bits (67), Expect = 4.5
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 22/93 (23%)
Query: 6 PRSLHPGPQRPLPHSRP-------RPAPQEQGP--------------ASTCTGRLWSFDK 44
PR + GP PL S+P RPA GP AS+ GR W +
Sbjct: 1177 PRRVPLGPSSPLSVSQPMLGIREARPAGLGAGPAASPHLSPSPAPSTASSAPGRTWQGNG 1236
Query: 45 RRSNGERGPGEERERKP-AGDGRRAGDQRELPP 76
+ +GP +KP A RR +LPP
Sbjct: 1237 EMTPPLQGPRARFRKKPKALPYRRENSPGDLPP 1269
>gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens]
Length = 377
Score = 39.3 bits (90), Expect = 0.010
Identities = 21/42 (50%), Positives = 22/42 (52%)
Query: 390 RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431
R EE K+L SG G SPVC RWC R K FP PQ
Sbjct: 47 RSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQ 88
Score = 31.6 bits (70), Expect = 2.0
Identities = 34/130 (26%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 440 PHWPQMKARRPVCTLRWICSREERLKALGQSGH----------WSR---DDHRNDLPHSP 486
P Q K PVCT W EE K L SGH W R + R PH P
Sbjct: 28 PMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCP 87
Query: 487 HSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP---T 543
+ A + +A + T+ GG+L L + P P
Sbjct: 88 Q--LCGFSAARSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHR 145
Query: 544 HGLFKGQGLP 553
G +G G P
Sbjct: 146 RGRPRGLGSP 155
>gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo
sapiens]
Length = 377
Score = 39.3 bits (90), Expect = 0.010
Identities = 21/42 (50%), Positives = 22/42 (52%)
Query: 390 RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431
R EE K+L SG G SPVC RWC R K FP PQ
Sbjct: 47 RSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQ 88
Score = 31.6 bits (70), Expect = 2.0
Identities = 34/130 (26%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 440 PHWPQMKARRPVCTLRWICSREERLKALGQSGH----------WSR---DDHRNDLPHSP 486
P Q K PVCT W EE K L SGH W R + R PH P
Sbjct: 28 PMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCP 87
Query: 487 HSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP---T 543
+ A + +A + T+ GG+L L + P P
Sbjct: 88 Q--LCGFSAARSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHR 145
Query: 544 HGLFKGQGLP 553
G +G G P
Sbjct: 146 RGRPRGLGSP 155
>gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo
sapiens]
Length = 417
Score = 39.3 bits (90), Expect = 0.010
Identities = 21/42 (50%), Positives = 22/42 (52%)
Query: 390 RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431
R EE K+L SG G SPVC RWC R K FP PQ
Sbjct: 87 RSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQ 128
Score = 31.6 bits (70), Expect = 2.0
Identities = 34/130 (26%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 440 PHWPQMKARRPVCTLRWICSREERLKALGQSGH----------WSR---DDHRNDLPHSP 486
P Q K PVCT W EE K L SGH W R + R PH P
Sbjct: 68 PMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCP 127
Query: 487 HSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP---T 543
+ A + +A + T+ GG+L L + P P
Sbjct: 128 Q--LCGFSAARSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHR 185
Query: 544 HGLFKGQGLP 553
G +G G P
Sbjct: 186 RGRPRGLGSP 195
>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
Length = 597
Score = 38.5 bits (88), Expect = 0.017
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 21/125 (16%)
Query: 52 GPGEERERKPAGD--GRRAGDQRELPPHV--PSLLSNLS-------AGRRRQRVDSHPVA 100
GP + R PAG+ G AG + ELPP V P LL LS G R Q+V
Sbjct: 41 GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKV------ 94
Query: 101 AVQQLSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVR 160
L+ A++E+ +G AGG+ + P K F + + + + +H L
Sbjct: 95 ----LAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQN 150
Query: 161 LECLK 165
L LK
Sbjct: 151 LVGLK 155
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 37.0 bits (84), Expect = 0.048
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 7 RSLHPGPQRPLPHSRPRPAPQEQ-GPASTCTGRLWSFD---KRRSNGERGPGEERERKPA 62
+SL P PQ +P +P Q GPA++ + R ++RS E P E+E +PA
Sbjct: 90 KSLDPLPQAAMPRGPAQPPAQRPPGPAASSSARRSQPVPQLRKRSRCEIAPSSEQEVRPA 149
Query: 63 GDGRRAGDQRELPPHVPSLLSNLSAGRRRQRVDSHPVAAVQQLSGWGAAD 112
G Q E P S A +Q + +Q+ GWG +
Sbjct: 150 ASG---DPQGEAPGEGGSPAGRSGALTEKQEEARKLMVFLQRPGGWGVVE 196
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 35.8 bits (81), Expect = 0.11
Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 6 PRSLHPGPQRPLPHSRPRPAPQ-EQGPASTCTGRLWSFDKRRSNGERGPGEERERKPAGD 64
P S P P+RP + A GP + R K S ER+R+ AG
Sbjct: 75 PGSPQPPPRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREAKETERKRRKAGG 134
Query: 65 GRRA--GDQRELPPHVPSL--LSNLSAGRRRQRVDSHPVAAVQQLSGWGAADDEEFLSGW 120
RR+ G R P + P + L+ L A R +R+ PV + S +D +G
Sbjct: 135 ARRSPPGRPRPEPRNAPRVAQLAGLPAPLRPERL--APVGRAPRPSAQPQSDPGSAWAGP 192
Query: 121 AGGRRLRQPRRKCFYLL 137
GGRR P + LL
Sbjct: 193 WGGRRPGPPSYEAHLLL 209
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 35.4 bits (80), Expect = 0.14
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 20 SRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERKPAGDGRRAGDQRELPPHVP 79
+RPRP P G L KR + G++ P +R R + RA P P
Sbjct: 196 ARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQR-RCSSPSAARASATSAPRPTAP 254
Query: 80 SLLSNLSAGR--RRQRVDSHPVAAVQQLSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLL 137
S ++ S+ R RR+ H + GA E +G R P + F+L
Sbjct: 255 SSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGPHVRPFFLP 314
Query: 138 YAESSLFAIGPAQH 151
SS F P H
Sbjct: 315 PTSSSFFGGPPRLH 328
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 35.4 bits (80), Expect = 0.14
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 20 SRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERKPAGDGRRAGDQRELPPHVP 79
+RPRP P G L KR + G++ P +R R + RA P P
Sbjct: 196 ARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQR-RCSSPSAARASATSAPRPTAP 254
Query: 80 SLLSNLSAGR--RRQRVDSHPVAAVQQLSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLL 137
S ++ S+ R RR+ H + GA E +G R P + F+L
Sbjct: 255 SSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGPHVRPFFLP 314
Query: 138 YAESSLFAIGPAQH 151
SS F P H
Sbjct: 315 PTSSSFFGGPPRLH 328
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 35.4 bits (80), Expect = 0.14
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 20/131 (15%)
Query: 423 VKLFPQTPQWDDHLKARPHWPQMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRNDL 482
V+ + + +DHL+ P P + A + +C +EERL G DD RN
Sbjct: 282 VETYGKIMNHEDHLQFPPDVPDVPASAQDLIRQLLCRQEERL------GRGGLDDFRNH- 334
Query: 483 PHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP 542
P W A + P ++ + T+ G + P P
Sbjct: 335 PFFEGVDWERLASSTAPYIPELRGPMDTSNFDVDDDTLNHPGTL-------------PPP 381
Query: 543 THGLFKGQGLP 553
+HG F G LP
Sbjct: 382 SHGAFSGHHLP 392
>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
sapiens]
Length = 487
Score = 34.7 bits (78), Expect = 0.24
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 269 ELHPTHFLAWQPDHSRPLARFPH-----CPRALPCTAAPS----PSTGGGQ---QDELGR 316
+L P++F WQ SR L PH CP P T+AP+ P+ G G Q + R
Sbjct: 311 QLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSGSLEGQTQSLR 370
Query: 317 CGRGRRCRGLHAAGDQLEALGSLHQEERLRVGRCWPQARGLGRAPRHLEG 366
R + L A + + RL+V R A+ +A HLEG
Sbjct: 371 HDRQGAQQVLPEAQQRAHEAVPQADKARLQVERAVVPAQ---QAGAHLEG 417
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 34.3 bits (77), Expect = 0.31
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 20/99 (20%)
Query: 280 PDHSRPLARFPHCPRALPCT----AAPSPSTGGGQQDELGRCGRGRRC-RGLHAA--GDQ 332
P H +P + CP T SPS D R G++C L+A GD+
Sbjct: 2142 PKHPKP-STVKDCPTLCKQTDNRQTDKSPSQPAANTD---RRAEGKKCTEALYAPAEGDK 2197
Query: 333 LEA-LGSLHQEERLR--------VGRCWPQARGLGRAPR 362
LEA L +H E RL+ VG+ +P+ARG G P+
Sbjct: 2198 LEAGLSFVHSENRLKGAERPAAGVGKGFPEARGKGPGPQ 2236
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 33.9 bits (76), Expect = 0.41
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 269 ELHPTHFLAWQPDHSRPLARFPH-----CPRALPCTAAPS----PSTGGG 309
+L P++F WQ SR L PH CP P T+AP+ P+ G G
Sbjct: 277 QLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG 326
>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 446
Score = 33.9 bits (76), Expect = 0.41
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 269 ELHPTHFLAWQPDHSRPLARFPH-----CPRALPCTAAPS----PSTGGG 309
+L P++F WQ SR L PH CP P T+AP+ P+ G G
Sbjct: 311 QLLPSNFSEWQAHRSRGLQNSPHALSASCPPTSPLTSAPNGYQHPARGSG 360
>gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]
Length = 1136
Score = 33.5 bits (75), Expect = 0.53
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 432 WDDHLKARPHWPQMKARRPVCTLRWICSREERLKALGQSGHWSRD----DHRNDLPHSPH 487
++ H+ A P M+AR+ + + +R E + + G + DHR H H
Sbjct: 559 FEPHVSANAWSPVMRARKSSFNVSDV-ARPEAAGSPPEEGGCTEGTPAKDHRAGRGHQVH 617
Query: 488 SYWAAGAGAAGPGFSPAPSAVE---------AGAMSAWEPTITPGGG 525
W + G P P A + +G MS+ E + P GG
Sbjct: 618 KSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>gi|42476028 ATPase family, AAA domain containing 3A [Homo sapiens]
Length = 634
Score = 33.5 bits (75), Expect = 0.53
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 42/217 (19%)
Query: 5 GPRSLHPGPQRPLPHSRP------------RPAPQEQGPASTCTGRLWS-FDKRRSNGER 51
GP+ GP PLP ++P RPAP+++ WS FD
Sbjct: 10 GPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPKDK----------WSNFDP------- 52
Query: 52 GPGEERERKPAGD---GRRAGDQRELPPHVPSLLSNLSAGRRRQRVDS----HPVAAVQQ 104
G ER K A + R A D L L + + R+++ H +
Sbjct: 53 -TGLERAAKAARELEHSRYAKDALNLAQMQEQTLQLEQQSKLKMRLEALSLLHTLVWAWS 111
Query: 105 LSGWGAADDEEFLSGWAGGRRLRQPRRKCFYLLYAESSLFAIGPAQHQHALQALVRLECL 164
L GA +E LSG A ++ P +C L E+++ + Q QA R + L
Sbjct: 112 LCRAGAVQTQERLSGSASPEQV--PAGECCALQEYEAAVEQL--KSEQIRAQAEERRKTL 167
Query: 165 KEDILDHTSAGLAIPRLPGARASEQLLSCPALNNQQV 201
E+ H + +L R +QL LN + +
Sbjct: 168 SEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENL 204
>gi|153792042 G protein-coupled receptor 178 [Homo sapiens]
Length = 612
Score = 33.5 bits (75), Expect = 0.53
Identities = 29/91 (31%), Positives = 31/91 (34%), Gaps = 14/91 (15%)
Query: 8 SLHPGPQRPL-----PHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERKPA 62
+L P P RPL P PR P Q P C + G GPG
Sbjct: 39 ALGPSPARPLTTSPAPAPPPRSRPARQQPDPQCWEKRGGAGGDTKGGAAGPG-------- 90
Query: 63 GDGRRAGDQRELPPHVPSLLSNLSAGRRRQR 93
GR G E P P L S L RR R
Sbjct: 91 -PGRLRGMDAEYPAFEPPLCSELKHLCRRLR 120
>gi|24475586 ependymin related protein 1 precursor [Homo sapiens]
Length = 344
Score = 33.5 bits (75), Expect = 0.53
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 441 HWPQMKARRPVCTLRWICSREERLKALGQSGHWSRDDHRNDLPHSPHSYWAAGAGAAGPG 500
HW +A P R S++ + GQ WSR PHS HS AG + PG
Sbjct: 49 HWSLPRALVPATGTRASGSQKRQRPPKGQEALWSR-------PHSRHSAERAGGSHSDPG 101
Query: 501 FSPAP 505
AP
Sbjct: 102 RLSAP 106
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 33.1 bits (74), Expect = 0.69
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 483 PHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP 542
P P S AA AGAA G A M A +P QR PA+ P P
Sbjct: 392 PSQPQSQ-AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP 450
Query: 543 THGLFKGQGLPPQV 556
T G +G + P V
Sbjct: 451 TMGRSQGSPMDPMV 464
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 33.1 bits (74), Expect = 0.69
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 483 PHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP 542
P P S AA AGAA G A M A +P QR PA+ P P
Sbjct: 392 PSQPQSQ-AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP 450
Query: 543 THGLFKGQGLPPQV 556
T G +G + P V
Sbjct: 451 TMGRSQGSPMDPMV 464
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 33.1 bits (74), Expect = 0.69
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 483 PHSPHSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP 542
P P S AA AGAA G A M A +P QR PA+ P P
Sbjct: 392 PSQPQSQ-AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP 450
Query: 543 THGLFKGQGLPPQV 556
T G +G + P V
Sbjct: 451 TMGRSQGSPMDPMV 464
>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 32.7 bits (73), Expect = 0.91
Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 2 PENGPRSLHPGPQRPLPHSRPRPAPQEQGPASTCTGRLWSFDKRRSNGERGPGEERERKP 61
P + P HP P P PRPA +E PA+ R F S G G +
Sbjct: 13 PRSSPARSHPPAPLPFPERLPRPAAKE--PAARTPAR-QVFPAAASAGREGSAAPDGARG 69
Query: 62 AGDGRRAGDQRELPPHVP 79
+ G A + PP P
Sbjct: 70 STPGLAASRELSPPPRAP 87
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.139 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,031,568
Number of Sequences: 37866
Number of extensions: 1702843
Number of successful extensions: 7430
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 7250
Number of HSP's gapped (non-prelim): 269
length of query: 564
length of database: 18,247,518
effective HSP length: 108
effective length of query: 456
effective length of database: 14,157,990
effective search space: 6456043440
effective search space used: 6456043440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.