Guide to the Human Genome
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Name: TMEM181 Sequence: fasta or formatted (612aa) NCBI GI: 153792042
Description:

G protein-coupled receptor 178

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         42           2
 C cysteine            2.0         12           1
 D aspartate           4.1         25           3
 E glutamate           3.8         23           2
 F phenylalanine       6.9         42           3
 G glycine             6.4         39           3
 H histidine           1.8         11           1
 I isoleucine          4.1         25           2
 K lysine              4.6         28           2
 L leucine            12.6         77           4
 M methionine          2.6         16           1
 N asparagine          3.4         21           2
 P proline             6.5         40           3
 Q glutamine           3.8         23           2
 R arginine            5.6         34           2
 S serine              6.9         42           4
 T threonine           5.4         33           2
 V valine              6.5         40           2
 W tryptophan          1.6         10           1
 Y tyrosine            4.7         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 178 
GPR177                0.026   G protein-coupled receptor 177 isoform 2 
GPR177                0.026   G protein-coupled receptor 177 isoform 1 
SFPQ                  0.020   splicing factor proline/glutamine rich (polypyrimidin...
RANBP9                0.019   RAN binding protein 9 
UNCX                  0.018   UNC homeobox 
TAF4                  0.017   TBP-associated factor 4 
LOC100132234          0.016   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.016   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.016   PREDICTED: hypothetical protein LOC100132234 
FLJ37078              0.015   hypothetical protein LOC222183 
CNOT3                 0.015   CCR4-NOT transcription complex, subunit 3 
LOC388079             0.014   PREDICTED: similar to hCG2042704 
SYNJ1                 0.014   synaptojanin 1 isoform d 
TMPRSS13              0.014   transmembrane protease, serine 13 
BSN                   0.014   bassoon protein 
MEPCE                 0.014   bin3, bicoid-interacting 3 
BPTF                  0.013   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.013   bromodomain PHD finger transcription factor isoform ...
CDX1                  0.013   caudal type homeobox 1 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
SAMD1                 0.013   sterile alpha motif domain containing 1 
PPP1R10               0.012   protein phosphatase 1, regulatory subunit 10 
LOC729580             0.012   PREDICTED: hypothetical protein 
LOC100292793          0.012   PREDICTED: hypothetical protein 
LOC729580             0.012   PREDICTED: hypothetical protein 
LOC100289661          0.012   PREDICTED: hypothetical protein 
LOC100290071          0.012   PREDICTED: hypothetical protein XP_002347957 
LOC729580             0.012   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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