Guide to the Human Genome
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Name: LOC100133807 Sequence: fasta or formatted (223aa) NCBI GI: 239749590
Description:

PREDICTED: similar to serine/threonine-protein kinase, putative, partial

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.2          5           2
 C cysteine            9.0         20           1
 D aspartate           1.8          4           1
 E glutamate           0.4          1           1
 F phenylalanine       0.9          2           1
 G glycine             0.4          1           1
 H histidine           8.1         18           1
 I isoleucine         17.9         40           2
 K lysine              1.3          3           1
 L leucine             2.7          6           2
 M methionine          4.9         11           1
 N asparagine          1.3          3           1
 P proline             0.9          2           1
 Q glutamine           1.8          4           1
 R arginine            3.6          8           2
 S serine              0.9          2           1
 T threonine           6.3         14           1
 V valine             13.0         29           1
 W tryptophan          0.0          0           0
 Y tyrosine           22.4         50           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to serine/threonine-protein kina... 
LOC100133226          0.425   PREDICTED: hypothetical protein 
LOC100129825          0.412   PREDICTED: hypothetical protein 
LOC100132983          0.404   PREDICTED: hypothetical protein 
LOC100293574          0.400   PREDICTED: hypothetical protein, partial 
LOC100288317          0.400   PREDICTED: hypothetical protein XP_002342505 
LOC100134411          0.397   PREDICTED: hypothetical protein 
LOC100132782          0.393   PREDICTED: hypothetical protein 
LOC100132679          0.389   PREDICTED: hypothetical protein 
LOC100132016          0.387   PREDICTED: hypothetical protein 
LOC100129802          0.376   PREDICTED: hypothetical protein 
LOC100134060          0.374   PREDICTED: hypothetical protein 
LOC100134279          0.374   PREDICTED: hypothetical protein, partial 
LOC100134730          0.374   PREDICTED: hypothetical protein 
LOC100291751          0.370   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100133173          0.368   PREDICTED: hypothetical protein 
LOC100131203          0.364   PREDICTED: hypothetical protein 
LOC100129642          0.364   PREDICTED: hypothetical protein 
LOC100131203          0.362   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.362   PREDICTED: similar to serine/threonine-protein kina...
LOC100133975          0.359   PREDICTED: hypothetical protein, partial 
LOC100133844          0.357   PREDICTED: hypothetical protein 
LOC100133515          0.357   PREDICTED: hypothetical protein 
LOC100134139          0.355   PREDICTED: hypothetical protein 
LOC100133450          0.353   PREDICTED: hypothetical protein, partial 
LOC100287975          0.353   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100134395          0.347   PREDICTED: hypothetical protein, partial 
LOC100133741          0.345   PREDICTED: hypothetical protein 
LOC100134325          0.342   PREDICTED: hypothetical protein 
LOC100134576          0.340   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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