| Name: LOC100290139 | Sequence: fasta or formatted (267aa) | NCBI GI: 239748716 | |
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Description: PREDICTED: hypothetical protein XP_002346782
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 13.1 35 4 C cysteine 1.1 3 1 D aspartate 1.9 5 1 E glutamate 4.9 13 2 F phenylalanine 0.7 2 1 G glycine 14.2 38 2 H histidine 1.5 4 1 I isoleucine 1.9 5 1 K lysine 2.6 7 1 L leucine 4.1 11 2 M methionine 0.7 2 1 N asparagine 1.1 3 1 P proline 12.7 34 3 Q glutamine 6.4 17 2 R arginine 14.2 38 3 S serine 9.4 25 2 T threonine 4.9 13 1 V valine 3.0 8 1 W tryptophan 1.5 4 1 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002346782 LOC100288835 0.771 PREDICTED: hypothetical protein XP_002342616 FLJ37078 0.053 hypothetical protein LOC222183 INSM2 0.052 insulinoma-associated protein IA-6 PRB1 0.052 proline-rich protein BstNI subfamily 1 isoform 1 pre... COL7A1 0.048 alpha 1 type VII collagen precursor ZNF469 0.048 zinc finger protein 469 PRB2 0.046 proline-rich protein BstNI subfamily 2 TTBK1 0.042 tau tubulin kinase 1 C2orf55 0.042 hypothetical protein LOC343990 PRB3 0.042 proline-rich protein BstNI subfamily 3 precursor [H... ANKRD33B 0.042 PREDICTED: ankyrin repeat domain 33B LOC100134702 0.042 PREDICTED: similar to mucin PRB4 0.042 proline-rich protein BstNI subfamily 4 precursor [Ho... SAMD1 0.040 sterile alpha motif domain containing 1 BSN 0.040 bassoon protein TAF4 0.038 TBP-associated factor 4 COL4A4 0.038 alpha 4 type IV collagen precursor MICALL2 0.038 MICAL-like 2 isoform 1 LOC100293005 0.038 PREDICTED: hypothetical protein LOC100170229 0.036 hypothetical protein LOC100170229 OGFR 0.036 opioid growth factor receptor LOC100292370 0.036 PREDICTED: hypothetical protein SYNJ1 0.036 synaptojanin 1 isoform b COL1A1 0.036 alpha 1 type I collagen preproprotein COL3A1 0.036 collagen type III alpha 1 preproprotein LOC100293596 0.036 PREDICTED: similar to mucin SNRPB 0.036 small nuclear ribonucleoprotein polypeptide B/B' iso... TCOF1 0.036 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.036 Treacher Collins-Franceschetti syndrome 1 isoform d...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
