COL4A4 1733

Name: COL4A4	Sequence: fasta or formatted (1690aa)		NCBI GI: 116256356
Description: alpha 4 type IV collagen precursor		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 69 2 C cysteine 1.9 32 1 D aspartate 4.3 72 2 E glutamate 3.4 58 2 F phenylalanine 2.7 45 2 G glycine 27.5 464 3 H histidine 2.0 33 1 I isoleucine 2.5 43 2 K lysine 4.9 83 2 L leucine 6.0 101 2 M methionine 1.4 24 2 N asparagine 0.9 15 1 P proline 20.4 345 2 Q glutamine 2.8 48 2 R arginine 4.1 70 2 S serine 4.5 76 2 T threonine 1.8 30 2 V valine 3.0 50 2 W tryptophan 0.5 9 1 Y tyrosine 1.4 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 4 type IV collagen precursor COL4A6 0.412 type IV alpha 6 collagen isoform B precursor COL4A6 0.412 type IV alpha 6 collagen isoform A precursor COL4A2 0.397 alpha 2 type IV collagen preproprotein COL4A5 0.397 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.397 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.396 type IV collagen alpha 5 isoform 3 precursor COL4A1 0.379 alpha 1 type IV collagen preproprotein COL4A3 0.327 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.302 alpha 3 type IV collagen isoform 2 precursor COL7A1 0.274 alpha 1 type VII collagen precursor COL4A3 0.273 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.265 alpha 3 type IV collagen isoform 5 precursor COL2A1 0.234 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.234 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.232 collagen type III alpha 1 preproprotein COL1A1 0.229 alpha 1 type I collagen preproprotein COL11A2 0.226 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL5A3 0.221 collagen, type V, alpha 3 preproprotein COL5A1 0.220 alpha 1 type V collagen preproprotein COL5A2 0.219 alpha 2 type V collagen preproprotein COL11A1 0.217 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.217 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.217 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A2 0.215 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.215 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL22A1 0.212 collagen, type XXII, alpha 1 COL16A1 0.208 alpha 1 type XVI collagen precursor COL1A2 0.201 alpha 2 type I collagen COL27A1 0.199 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.