Guide to the Human Genome
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Name: TTBK1 Sequence: fasta or formatted (1321aa) NCBI GI: 58761548
Description:

tau tubulin kinase 1

Referenced in:

Protein Composition and Structure
Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0        119           4
 C cysteine            0.5          6           1
 D aspartate           4.3         57           2
 E glutamate          10.4        138          23
 F phenylalanine       2.0         26           1
 G glycine             8.8        116           4
 H histidine           1.7         23           1
 I isoleucine          1.9         25           2
 K lysine              3.8         50           2
 L leucine             8.7        115           3
 M methionine          2.2         29           1
 N asparagine          2.3         31           1
 P proline            10.0        132           3
 Q glutamine           4.4         58           2
 R arginine            8.6        113           3
 S serine              9.5        126           5
 T threonine           5.0         66           2
 V valine              5.3         70           2
 W tryptophan          0.5          7           1
 Y tyrosine            1.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tau tubulin kinase 1 
TTBK2                 0.245   tau tubulin kinase 2 
CSNK1D                0.060   casein kinase 1, delta isoform 2 
CSNK1D                0.060   casein kinase 1, delta isoform 1 
CSNK1E                0.058   casein kinase 1 epsilon 
CSNK1E                0.058   casein kinase 1 epsilon 
CSNK1A1               0.057   casein kinase 1, alpha 1 isoform 2 
CSNK1G1               0.053   casein kinase 1, gamma 1 
CSNK1A1               0.052   casein kinase 1, alpha 1 isoform 1 
CSNK1A1L              0.052   casein kinase 1, alpha 1-like 
CSNK1G2               0.052   casein kinase 1, gamma 2 
CSNK1G3               0.050   casein kinase 1, gamma 3 isoform 4 
CSNK1G3               0.050   casein kinase 1, gamma 3 isoform 3 
CSNK1G3               0.050   casein kinase 1, gamma 3 isoform 2 
CSNK1G3               0.050   casein kinase 1, gamma 3 isoform 1 
VRK2                  0.029   vaccinia related kinase 2 isoform 3 
VRK2                  0.029   vaccinia related kinase 2 isoform 2 
VRK2                  0.029   vaccinia related kinase 2 isoform 1 
VRK2                  0.029   vaccinia related kinase 2 isoform 1 
VRK2                  0.029   vaccinia related kinase 2 isoform 1 
VRK1                  0.027   vaccinia related kinase 1 
ABL1                  0.024   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.024   c-abl oncogene 1, receptor tyrosine kinase isoform b...
MST4                  0.023   serine/threonine protein kinase MST4 isoform 1 [Homo...
VRK2                  0.022   vaccinia related kinase 2 isoform 6 
MYT1                  0.022   myelin transcription factor 1 
STK24                 0.021   serine/threonine kinase 24 isoform b 
STK24                 0.021   serine/threonine kinase 24 isoform a 
STK25                 0.020   serine/threonine kinase 25 
PELP1                 0.020   proline, glutamic acid and leucine rich protein 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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