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Search of human proteins with 229577354
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229577354 IQ motif containing F1 [Homo sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229577354 IQ motif containing F1 [Homo sapiens] 417 e-117
gi|222831628 IQ motif containing F5 [Homo sapiens] 176 9e-45
gi|44662817 IQ motif containing F2 [Homo sapiens] 156 1e-38
gi|254028213 IQ motif containing F6 [Homo sapiens] 114 6e-26
gi|146261997 IQ motif containing F3 [Homo sapiens] 102 2e-22
gi|124494247 myosin IC isoform b [Homo sapiens] 46 2e-05
gi|124494238 myosin IC isoform a [Homo sapiens] 46 2e-05
gi|124494240 myosin IC isoform c [Homo sapiens] 46 2e-05
gi|156119615 myosin IXA [Homo sapiens] 45 6e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 41 6e-04
gi|122937315 leucine-rich repeats and IQ motif containing 4 [Hom... 40 0.002
gi|20270345 spermatogenesis associated 17 [Homo sapiens] 39 0.002
gi|126116596 asp (abnormal spindle)-like, microcephaly associate... 38 0.005
gi|153945715 myosin VC [Homo sapiens] 37 0.012
gi|39753961 IQ motif containing GTPase activating protein 3 [Hom... 37 0.015
gi|215982794 myosin VA isoform 2 [Homo sapiens] 36 0.020
gi|215982791 myosin VA isoform 1 [Homo sapiens] 36 0.020
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 35 0.034
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 35 0.034
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 35 0.034
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 35 0.045
gi|197313718 IQ motif containing G [Homo sapiens] 35 0.058
gi|14165288 IQ motif containing G [Homo sapiens] 35 0.058
gi|194328685 myosin IB isoform 1 [Homo sapiens] 34 0.076
gi|44889481 myosin IB isoform 2 [Homo sapiens] 34 0.076
gi|240120050 myosin IB isoform 1 [Homo sapiens] 34 0.076
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 34 0.076
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 34 0.076
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 34 0.076
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 34 0.099
>gi|229577354 IQ motif containing F1 [Homo sapiens]
Length = 205
Score = 417 bits (1071), Expect = e-117
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE
Sbjct: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
Query: 61 NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA
Sbjct: 61 NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
Query: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQL 180
FSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQL
Sbjct: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQL 180
Query: 181 HLQLEILLDSGPCIVTECIPFSIKE 205
HLQLEILLDSGPCIVTECIPFSIKE
Sbjct: 181 HLQLEILLDSGPCIVTECIPFSIKE 205
>gi|222831628 IQ motif containing F5 [Homo sapiens]
Length = 148
Score = 176 bits (447), Expect = 9e-45
Identities = 84/144 (58%), Positives = 104/144 (72%)
Query: 62 QKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAF 121
+K + + + A IQAWWRG LVRR LLHAAL A IIQCWWR +L K+L KRR+ LE +
Sbjct: 5 EKTIMTERSAAVFIQAWWRGMLVRRTLLHAALRAWIIQCWWRQVLEKLLAKRRRMVLEFY 64
Query: 122 SRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQLH 181
++EWAAV LQS RMW +R+RYC++LNAVRIIQ YWR SC SR FI+G Y + NQL+
Sbjct: 65 VQQEWAAVRLQSWVRMWCVRQRYCRLLNAVRIIQVYWRWHSCHSRVFIEGHYELKENQLN 124
Query: 182 LQLEILLDSGPCIVTECIPFSIKE 205
+QLEI L C V +CIP +KE
Sbjct: 125 IQLEISLGLQACKVQQCIPLPLKE 148
>gi|44662817 IQ motif containing F2 [Homo sapiens]
Length = 164
Score = 156 bits (395), Expect = 1e-38
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 41 VLVETQTVDNANEKSEKPPENQKKLSDKDTVATK----IQAWWRGTLVRRALLHAALSAC 96
+LV + V+ + E + Q+K+ +K + TK IQAWWRGTLVRR LLHAAL A
Sbjct: 12 ILVIIEDVEESIEWKTLQKKKQQKIKEKLRIRTKAAVKIQAWWRGTLVRRTLLHAALRAW 71
Query: 97 IIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQA 156
IIQCWWR+ LS++L+K+RQAAL A++ +E A + LQS RMWR+R RYCQVLNA+ IIQ
Sbjct: 72 IIQCWWRMTLSRVLEKKRQAALIAYATRERAVIKLQSLVRMWRVRWRYCQVLNAIYIIQG 131
Query: 157 YWRCRSCASRGFIKGQYRVTANQLHLQLEIL 187
+W+C +C + ++G VTA L +EI+
Sbjct: 132 HWQCHNCQTCALLQGHCVVTATHLQFHIEII 162
>gi|254028213 IQ motif containing F6 [Homo sapiens]
Length = 107
Score = 114 bits (285), Expect = 6e-26
Identities = 52/106 (49%), Positives = 76/106 (71%)
Query: 83 LVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQARMWRIRR 142
+VRR LL AAL A +IQCWWR + +K+L++RR+ AL ++ +EWA V +Q+Q RMW+ RR
Sbjct: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
Query: 143 RYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQLHLQLEILL 188
R+ Q A IIQ++WR + +RG I+G Y V A++L L +EIL+
Sbjct: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEILM 106
Score = 29.6 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWR 103
++ K+QA R RR L A +ACIIQ WR
Sbjct: 42 QEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
>gi|146261997 IQ motif containing F3 [Homo sapiens]
Length = 154
Score = 102 bits (255), Expect = 2e-22
Identities = 52/116 (44%), Positives = 74/116 (63%)
Query: 72 ATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTL 131
A +IQAWWRG LVRR LL AAL A +IQCWWR ++ + +++RRQA L + +E A V L
Sbjct: 37 AGQIQAWWRGVLVRRTLLVAALRAWMIQCWWRTLVQRRIRQRRQALLRVYVIQEQATVKL 96
Query: 132 QSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQLHLQLEIL 187
QS RMW+ R+ Y Q+ NA+ + Q + + GF++ QY + + Q +EIL
Sbjct: 97 QSCIRMWQCRQCYRQMCNALCLFQVPESSLAFQTDGFLQVQYAIPSKQPEFHIEIL 152
>gi|124494247 myosin IC isoform b [Homo sapiens]
Length = 1044
Score = 46.2 bits (108), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWA 127
+ ++ATKIQA WRG R+ L SA IQ WWR L RR+AA +++WA
Sbjct: 715 RQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLG-----RRKAA-----KRKWA 764
Query: 128 AVTLQSQARMWRIR 141
A T++ R + +R
Sbjct: 765 AQTIRRLIRGFVLR 778
>gi|124494238 myosin IC isoform a [Homo sapiens]
Length = 1063
Score = 46.2 bits (108), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWA 127
+ ++ATKIQA WRG R+ L SA IQ WWR L RR+AA +++WA
Sbjct: 734 RQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLG-----RRKAA-----KRKWA 783
Query: 128 AVTLQSQARMWRIR 141
A T++ R + +R
Sbjct: 784 AQTIRRLIRGFVLR 797
>gi|124494240 myosin IC isoform c [Homo sapiens]
Length = 1028
Score = 46.2 bits (108), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWA 127
+ ++ATKIQA WRG R+ L SA IQ WWR L RR+AA +++WA
Sbjct: 699 RQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLG-----RRKAA-----KRKWA 748
Query: 128 AVTLQSQARMWRIR 141
A T++ R + +R
Sbjct: 749 AQTIRRLIRGFVLR 762
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 44.7 bits (104), Expect = 6e-05
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 75 IQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAAL--EAFSRKEWAAVTLQ 132
+Q W+R L R+ LH ++ IIQ +WR L++ K+ R AA+ +AF AA LQ
Sbjct: 1026 LQRWFRVLLCRQHFLHLRQASVIIQRFWRNYLNQ--KQVRDAAVQKDAFVMAS-AAALLQ 1082
Query: 133 SQARMWRIRRRYCQVLNAVRIIQAYWR 159
+ R R+RY ++ A +IQ WR
Sbjct: 1083 ASWRAHLERQRYLELRAAAIVIQQKWR 1109
Score = 38.5 bits (88), Expect = 0.004
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Query: 52 NEKSEKPPENQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILK 111
N+K + QK + A +QA WR L R+ L +A +IQ WR
Sbjct: 1058 NQKQVRDAAVQKDAFVMASAAALLQASWRAHLERQRYLELRAAAIVIQQKWR-------- 1109
Query: 112 KRRQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASR 166
+ + R+ AA+ +Q++ + +R +RY + + ++Q+ CR +R
Sbjct: 1110 -------DYYRRRHMAAICIQARWKAYRESKRYQEQRKKIILLQS--TCRGFRAR 1155
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 41.2 bits (95), Expect = 6e-04
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNAN--EKSEKPP 59
E K P+K K P KE+ E + + A+S AE K+P ++ T + A EK++ P
Sbjct: 597 EAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPE 656
Query: 60 ENQKKLSDKDTVATKIQA 77
+ + K +K K +A
Sbjct: 657 KEEAKSPEKAKSPVKAEA 674
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPEN 61
E K P+K K P KE+ ++ + + A+S +AK+PV E + + EK++ P +
Sbjct: 645 EAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAK----SPEKAKSPVKE 700
Query: 62 QKKLSDKDTVATKIQA 77
+ K +K K +A
Sbjct: 701 EAKSPEKAKSPVKEEA 716
Score = 38.1 bits (87), Expect = 0.005
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNAN---EKSEKP 58
E K P+K K P KE+ ++ + + A+S +AK+PV E +T + A ++ K
Sbjct: 687 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKS 746
Query: 59 PENQKKLSDKDTVATK 74
PE K T+ K
Sbjct: 747 PEKAKSPEKAKTLDVK 762
Score = 36.2 bits (82), Expect = 0.020
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 2 EEKQPQKTKEPSKED--EPQQKEMP----THLSLGAESKAEAKTPVLVETQTVDNAN--E 53
E K P+K K P+KE+ P + + P + + A+S AEAK+PV E ++ E
Sbjct: 577 EVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPE 636
Query: 54 KSEKPPENQKKLSDKDTVATKIQA 77
K++ P + + K +K K +A
Sbjct: 637 KAKSPTKEEAKSPEKAKSPEKEEA 660
Score = 35.8 bits (81), Expect = 0.026
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSE-KPPE 60
E K P+K K P+KE+ E + A+S AE K+P ++ + A +E K PE
Sbjct: 543 EVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPE 602
Query: 61 NQK 63
K
Sbjct: 603 KAK 605
Score = 35.0 bits (79), Expect = 0.045
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNAN--------- 52
E K P+K K P K + ++ + + A+S +AK+PV E ++ + A
Sbjct: 659 EAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKS 718
Query: 53 -EKSEKPPENQKKLSDKDTVATKIQA 77
EK++ P + + K +K K +A
Sbjct: 719 PEKAKSPVKEEAKTPEKAKSPVKEEA 744
Score = 34.7 bits (78), Expect = 0.058
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 2 EEKQPQKTKEPSKED-EPQQKEMPTHLSLGAESKAEAK-TPVLVETQTVDNANEKSEKPP 59
E K P+K K P KED + +KE+P + + K E K V V+ EK+ P
Sbjct: 792 EVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATP 851
Query: 60 ENQKKLSDKDTVATKIQA 77
+ ++K K A K +A
Sbjct: 852 KTEEKKDSKKEEAPKKEA 869
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 2 EEKQPQKTKEPSKED--EPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNA-NEKSEKP 58
E K P+K K P KE+ P++ + P K EAKTP ++ + A + + K
Sbjct: 701 EAKSPEKAKSPVKEEAKSPEKAKSPV--------KEEAKTPEKAKSPVKEEAKSPEKAKS 752
Query: 59 PENQKKLSDKDTVA 72
PE K L K A
Sbjct: 753 PEKAKTLDVKSPEA 766
Score = 32.7 bits (73), Expect = 0.22
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSE-KPPE 60
E K P + K P KE+ E+ + + +K EAK+P ++ + A +E K PE
Sbjct: 523 EAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPE 582
Query: 61 NQK 63
K
Sbjct: 583 KAK 585
Score = 32.3 bits (72), Expect = 0.29
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVET--QTVDNANEKSEKPP 59
E K P + K P K P ++E + + K EAK+P V++ + A E+++ P
Sbjct: 537 EAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPA 596
Query: 60 ENQKKLSDKDTV 71
E + K V
Sbjct: 597 EAKSPEKAKSPV 608
Score = 31.6 bits (70), Expect = 0.49
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query: 2 EEKQPQKTKEPSKED--EPQQKEMPTHLSLGAESKA--------------EAKTPVLVET 45
E K P+K K P KE+ P++ + P + KA EAKTP E
Sbjct: 715 EAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEA 774
Query: 46 QT-VDNANEKSEKPPENQKKLSDK 68
++ D EK++ P + + K +K
Sbjct: 775 RSPADKFPEKAKSPVKEEVKSPEK 798
Score = 30.0 bits (66), Expect = 1.4
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPEN 61
E K P + K P KE+ E+ + + +K EAK+P ++ EK++ P +
Sbjct: 557 EAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSP------EKAKSPVKE 610
Query: 62 QKK 64
+ K
Sbjct: 611 EAK 613
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPEN 61
E K P + K P K P ++E A+S +AK+P E + + EK++ P +
Sbjct: 625 EAKSPAEVKSPEKAKSPTKEE--------AKSPEKAKSPEKEEAK----SPEKAKSPVKA 672
Query: 62 QKKLSDKDTVATKIQA 77
+ K +K K +A
Sbjct: 673 EAKSPEKAKSPVKAEA 688
Score = 27.7 bits (60), Expect = 7.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 2 EEKQPQK-TKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
E P+K K P KE+ E + A+S AE K+P ++ A E+++ PPE
Sbjct: 508 EAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSP----AKEEAKSPPE 563
Score = 27.3 bits (59), Expect = 9.3
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 7 QKTKEPSKEDEPQ-QKEMPTHLSLGAESKAEAKTPVLVETQTVDNAN--EKSEKPPENQK 63
++TK P E+ +KE + + A+S AEAK+P E ++ EK++ P + +
Sbjct: 499 EETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA 558
Query: 64 K 64
K
Sbjct: 559 K 559
>gi|122937315 leucine-rich repeats and IQ motif containing 4 [Homo
sapiens]
Length = 560
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 5 QPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPEN--- 61
Q Q KE ED + THL +S K L++ + E + E
Sbjct: 442 QAQALKELRLEDN-----LLTHLPENLDSLVNLKVLTLMDNPMEEPPKEVCAEGNEAIWK 496
Query: 62 -QKKLSDKDTVATKIQAWWRGTLVRR 86
K+ +++ +ATKIQAWWRGT+V+R
Sbjct: 497 YLKENRNRNIMATKIQAWWRGTMVQR 522
>gi|20270345 spermatogenesis associated 17 [Homo sapiens]
Length = 361
Score = 39.3 bits (90), Expect = 0.002
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA------F 121
++ A KIQ+W+RG VR + H IIQ WWR L +K+ Q ++
Sbjct: 32 ENDAAVKIQSWFRGCQVRAYIRHLNRIVTIIQKWWRSFLG---RKQYQLTVQVAYYTMMM 88
Query: 122 SRKEWAAVTLQSQARMWRIRR 142
+ AV +Q + R +R+R+
Sbjct: 89 NLYNAMAVRIQRRWRGYRVRK 109
Score = 27.3 bits (59), Expect = 9.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 114 RQAALEAFSRKEW-AAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
R + ++ F +KE AAV +QS R ++R + V IIQ +WR
Sbjct: 21 RNSVVDPFRKKENDAAVKIQSWFRGCQVRAYIRHLNRIVTIIQKWWR 67
>gi|126116596 asp (abnormal spindle)-like, microcephaly associated
[Homo sapiens]
Length = 3477
Score = 38.1 bits (87), Expect = 0.005
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 60 ENQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALE 119
++++ L+ K T A KIQ+ +RG VRR + H +A I+ +++ S+I
Sbjct: 2086 QHKEYLNLKKT-AIKIQSVYRGIRVRRHIQHMHRAATFIKAMFKMHQSRI---------- 2134
Query: 120 AFSRKEWAAVTLQSQARMW----RIRRRYCQVLNAVRIIQAYWR 159
++ AA+ +Q + R + R +Y +L AV+++QA +R
Sbjct: 2135 SYHTMRKAAIVIQVRCRAYYQGKMQREKYLTILKAVKVLQASFR 2178
Score = 37.7 bits (86), Expect = 0.007
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 63 KKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAA----- 117
+K + ++ A IQ+W+R R ++ IIQ +R ++ L KRR+ +
Sbjct: 1459 RKQAKEENSAIIIQSWYRMHKELRKYIYIRSCVVIIQKRFRCFQAQKLYKRRKESILTIQ 1518
Query: 118 ----------LEAFSRKEWAAVTLQSQARMWRIR-RRYCQVLNAVRIIQAYWRCRSCASR 166
+E + + A +Q QA R++ C+ + A +IQ+YWR R R
Sbjct: 1519 KYYKAYLKGKIERTNYLQKRAAAIQLQAAFRRLKAHNLCRQIRAACVIQSYWRMRQDRVR 1578
Query: 167 GFIKGQYRVTANQLHLQ 183
F+ + + Q H++
Sbjct: 1579 -FLNLKKTIIKFQAHVR 1594
Score = 36.6 bits (83), Expect = 0.015
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 19/107 (17%)
Query: 62 QKKLSDKDTVATKIQAWWRGTLVRRALLHAAL---------SACIIQCWWRLILSKILKK 112
+++L + A IQ +WR L +R LL +A +IQ +WR
Sbjct: 1309 KQRLRKRVNAALVIQKYWRRVLAQRKLLMLKKEKLEKVQNKAASLIQGYWR--------- 1359
Query: 113 RRQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
R + + F + ++ ++ LQS+ RM Y + L A IQ +WR
Sbjct: 1360 -RYSTRQRFLKLKYYSIILQSRIRMIIAVTSYKRYLWATVTIQRHWR 1405
Score = 36.2 bits (82), Expect = 0.020
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 75 IQAWWRGTLVRRALLHAALSACIIQCWWRLILS----KILKKRR---QAALEAFS----- 122
+Q+ W+G +RR L A IIQ ++R+ + KI+KK Q A+S
Sbjct: 1954 LQSMWKGKTLRRQLQRQHKCAIIIQSYYRMHVQQKKWKIMKKAALLIQKYYRAYSIGREQ 2013
Query: 123 -----RKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
+ + A VTLQS R ++R+R A IQ+ +R
Sbjct: 2014 NHLYLKTKAAVVTLQSAYRGMKVRKRIKDCNKAAVTIQSKYR 2055
Score = 35.0 bits (79), Expect = 0.045
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 60 ENQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALE 119
+ ++ L + AT IQ+ +R LVRR + + +Q +R + I K + L
Sbjct: 2399 KTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYR---ATICAKHK---LY 2452
Query: 120 AFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
F AA+T+QS R ++++ ++ A +IQA +R
Sbjct: 2453 QFLHLRKAAITIQSSYRRLMVKKKLQEMQRAAVLIQATFR 2492
Score = 35.0 bits (79), Expect = 0.045
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 27/131 (20%)
Query: 63 KKLSDKDTVATKIQAWWR-----------------------GTLVRRALLHAALSACIIQ 99
KK K A KIQAW+R L R L+ SA IIQ
Sbjct: 2949 KKYLCKVKAACKIQAWYRCWRAHKEYLAILKAVKIIQGCFYTKLERTRFLNVRASAIIIQ 3008
Query: 100 CWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
WR IL + + ++ AA +Q+ R ++ R+ + + +A IIQ Y R
Sbjct: 3009 RKWRAILPAKIAHEHFLMI----KRHRAACLIQAHYRGYKGRQVFLRQKSAALIIQKYIR 3064
Query: 160 CRSCASRGFIK 170
R IK
Sbjct: 3065 AREAGKHERIK 3075
Score = 34.7 bits (78), Expect = 0.058
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 75 IQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQ 134
IQA +G + +R S IQ WR +K + K AA +Q+
Sbjct: 2916 IQARSKGFIQKRKFQEIKNSTIKIQAMWRRYRAK-----------KYLCKVKAACKIQAW 2964
Query: 135 ARMWRIRRRYCQVLNAVRIIQ 155
R WR + Y +L AV+IIQ
Sbjct: 2965 YRCWRAHKEYLAILKAVKIIQ 2985
Score = 34.3 bits (77), Expect = 0.076
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 72 ATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTL 131
AT IQ +R ++RR L +A +IQ +R L K Q F + + A + +
Sbjct: 2266 ATLIQRRFRTLMMRRRFLSLKKTAILIQRKYRAHLCT--KHHLQ-----FLQVQNAVIKI 2318
Query: 132 QSQARMWRIRRRYCQVLNAVRIIQAYWR 159
QS R W IR+R ++ A IQ+ +R
Sbjct: 2319 QSSYRRWMIRKRMREMHRAATFIQSTFR 2346
Score = 33.9 bits (76), Expect = 0.099
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 75 IQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQ 134
IQ+++RG VR+ + + +A +IQ ++R+ +K+ + K+ A V +Q+
Sbjct: 2672 IQSYYRGFKVRKDIQNMHRAATLIQSFYRMHRAKV----------DYETKKTAIVVIQNY 2721
Query: 135 ARMW-RI---RRRYCQVLNAVRIIQAYWR 159
R++ R+ R+ + V +VR IQA +R
Sbjct: 2722 YRLYVRVKTERKNFLAVQKSVRTIQAAFR 2750
Score = 33.1 bits (74), Expect = 0.17
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 62 QKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAF 121
+++ + A +Q ++R R+ L +A ++Q +R LS K +RQ L+
Sbjct: 2853 RRRFVQQKRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSA--KHQRQVYLQIR 2910
Query: 122 SRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
S + + +Q++++ + +R++ ++ N+ IQA WR
Sbjct: 2911 S----SVIIIQARSKGFIQKRKFQEIKNSTIKIQAMWR 2944
Score = 32.7 bits (73), Expect = 0.22
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 41/132 (31%)
Query: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKI------------------ 109
K A ++QA +R L L +AC+IQ +WR+ ++
Sbjct: 1537 KRAAAIQLQAAFR-RLKAHNLCRQIRAACVIQSYWRMRQDRVRFLNLKKTIIKFQAHVRK 1595
Query: 110 ------LKKRRQAA----------------LEAFSRKEWAAVTLQSQARMWRIRRRYCQV 147
KK ++AA L ++ + A + LQS R + R+ Y +
Sbjct: 1596 HQQRQKYKKMKKAAVIIQTHFRAYIFAMKVLASYQKTRSAVIVLQSAYRGMQARKMYIHI 1655
Query: 148 LNAVRIIQAYWR 159
L +V IQ+Y+R
Sbjct: 1656 LTSVIKIQSYYR 1667
Score = 32.7 bits (73), Expect = 0.22
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 62 QKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAF 121
+K++ D + A IQ+ +R ++ SA IIQ W+R I KI + + L
Sbjct: 2037 RKRIKDCNKAAVTIQSKYRAYKTKKKYATYRASAIIIQRWYRGI--KITNHQHKEYLNL- 2093
Query: 122 SRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
+ A+ +QS R R+RR + A I+A ++
Sbjct: 2094 ---KKTAIKIQSVYRGIRVRRHIQHMHRAATFIKAMFK 2128
Score = 32.3 bits (72), Expect = 0.29
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 57 KPPENQKK-LSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWR---------LIL 106
K NQ+K AT +QA +RG VR+ + +++A IQ +R +L
Sbjct: 1789 KAQVNQRKNFLQVKKAATCLQAAYRGYKVRQLIKQQSIAALKIQSAFRGYNKRVKYQSVL 1848
Query: 107 SKILKKRR--------QAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYW 158
I+K +R F + + A ++LQS R W++R++ + A IQ+ +
Sbjct: 1849 QSIIKIQRWYRAYKTLHDTRTHFLKTKAAVISLQSAYRGWKVRKQIRREHQAALKIQSAF 1908
Query: 159 R 159
R
Sbjct: 1909 R 1909
Score = 32.0 bits (71), Expect = 0.38
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 21/117 (17%)
Query: 61 NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQA---- 116
++K+ K+Q+ + R+ LH +A IQ +R KI ++R+
Sbjct: 1671 SKKEFLSLKNATIKLQSTVKMKQTRKQYLHLRAAALFIQQCYRS--KKIAAQKREEYMQM 1728
Query: 117 -----ALEAFSR----------KEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYW 158
L+AF R + A ++LQS RM + R+ Y ++ A+ +IQ Y+
Sbjct: 1729 RESCIKLQAFVRGYLVRKQMRLQRKAVISLQSYFRMRKARQYYLKMYKAIIVIQNYY 1785
Score = 31.6 bits (70), Expect = 0.49
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 30/159 (18%)
Query: 60 ENQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKR------ 113
E +K+ +K A+ IQ +WR R+ L + I+Q R+I++ KR
Sbjct: 1341 EKLEKVQNK--AASLIQGYWRRYSTRQRFLKLKYYSIILQSRIRMIIAVTSYKRYLWATV 1398
Query: 114 -----------RQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAY--WRC 160
R+ + + + + + +QS R W+ R+ QV V + +A+ W
Sbjct: 1399 TIQRHWRAYLRRKQDQQRYEMLKSSTLIIQSMFRKWKQRKMQSQVKATVILQRAFREWHL 1458
Query: 161 RSCA----SRGFIKGQYRVTANQLHLQLEILLDSGPCIV 195
R A S I+ YR +H +L + C+V
Sbjct: 1459 RKQAKEENSAIIIQSWYR-----MHKELRKYIYIRSCVV 1492
Score = 31.6 bits (70), Expect = 0.49
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 26/104 (25%)
Query: 72 ATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEW--AAV 129
A IQA +RG R+ L +A IIQ K ++ R E E+ + V
Sbjct: 3033 ACLIQAHYRGYKGRQVFLRQKSAALIIQ--------KYIRAREAGKHERIKYIEFKKSTV 3084
Query: 130 TLQSQARMWRIRRRYCQV----------------LNAVRIIQAY 157
LQ+ R W +R+R+ + LNAVRI +AY
Sbjct: 3085 ILQALVRGWLVRKRFLEQRAKIRLLHFTAAAYYHLNAVRIQRAY 3128
Score = 30.0 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 114 RQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRC 160
R+ L +++E +A+ +QS RM + R+Y + + V IIQ +RC
Sbjct: 1454 REWHLRKQAKEENSAIIIQSWYRMHKELRKYIYIRSCVVIIQKRFRC 1500
Score = 30.0 bits (66), Expect = 1.4
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 72 ATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSK--------ILKKRRQAALEAFSR 123
A +IQ ++ L + S IQ W+R L + +KK E S+
Sbjct: 3121 AVRIQRAYKLYLAVKNANKQVNSVICIQRWFRARLQEKRFIQKYHSIKKIEHEGQECLSQ 3180
Query: 124 KEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
+ AA +Q R + +R++ + + + IQA WR
Sbjct: 3181 RNRAASVIQKAVRHFLLRKKQEKFTSGIIKIQALWR 3216
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 94 SACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRI 153
+A +IQ WR K KR Q +E AA +Q + ++R + +NA +
Sbjct: 1269 AARLIQTTWRKYKLKTDLKRHQ-------EREKAARIIQLAVINFLAKQRLRKRVNAALV 1321
Query: 154 IQAYWR 159
IQ YWR
Sbjct: 1322 IQKYWR 1327
Score = 29.3 bits (64), Expect = 2.4
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 75 IQAWWRGTLV---RRALLHAALSACI-IQCWWRLILSKILKKRRQAALEA---------- 120
IQ W++ + + + A H+ A + IQ + ++++ L+ ++ AAL
Sbjct: 2794 IQEWYKASGLACSQEAEYHSQSRAAVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYR 2853
Query: 121 --FSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
F +++ AA+TLQ R W+ R+++ A ++Q ++R
Sbjct: 2854 RRFVQQKRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYR 2894
Score = 28.9 bits (63), Expect = 3.2
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 110 LKKRRQAALEAFSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFI 169
L+KR AAL +K W V Q + M + + A +IQ YWR S R F+
Sbjct: 1312 LRKRVNAALVI--QKYWRRVLAQRKLLMLKKEKLEKVQNKAASLIQGYWRRYSTRQR-FL 1368
Query: 170 KGQYRVTANQLHLQLEILLDS 190
K +Y Q +++ I + S
Sbjct: 1369 KLKYYSIILQSRIRMIIAVTS 1389
Score = 27.7 bits (60), Expect = 7.1
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 75 IQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQ 134
+QA +RG VRR L +A +IQ +R + + + + ++ WA Q
Sbjct: 2173 LQASFRGVRVRRTLRKMQTAATLIQSNYRRYRQQTYFNKLKKITKTVQQRYWAMKERNIQ 2232
Query: 135 ARMWRIRRRYCQVLNAVRIIQAYWR 159
+RY ++ ++V IQA +R
Sbjct: 2233 F------QRYNKLRHSVIYIQAIFR 2251
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 37.0 bits (84), Expect = 0.012
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Query: 75 IQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKE-WAAVTLQS 133
+Q RG L R+ L +A IIQ ++R ++ + A+ A + KE WAA+ +Q
Sbjct: 763 VQKHMRGWLQRKKFLRERRAALIIQQYFRG------QQTVRKAITAVALKEAWAAIIIQK 816
Query: 134 QARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFI-KGQYR 174
R + +R Y + A +QAY SRGF+ + +YR
Sbjct: 817 HCRGYLVRSLYQLIRMATITMQAY-------SRGFLARRRYR 851
Score = 34.3 bits (77), Expect = 0.076
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 62 QKKLSDKDTVATKIQAWWRGT-LVRRALLHAAL----SACIIQCWWRLILSKILKKRRQA 116
+KK + A IQ ++RG VR+A+ AL +A IIQ R L + L + +
Sbjct: 773 RKKFLRERRAALIIQQYFRGQQTVRKAITAVALKEAWAAIIIQKHCRGYLVRSLYQLIRM 832
Query: 117 A---LEAFSR------------KEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
A ++A+SR +E AV LQ AR W RRR+ + V IQ +R
Sbjct: 833 ATITMQAYSRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYR 890
>gi|39753961 IQ motif containing GTPase activating protein 3 [Homo
sapiens]
Length = 1631
Score = 36.6 bits (83), Expect = 0.015
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 74 KIQAWWRGTLVRRAL------LHAALSACI-IQCWWRLILSKILKKRRQAALEAFSRKEW 126
++QA RG LVR+ L L A I IQ WR + K L+ F
Sbjct: 736 QLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQR---KIYLEWLQYFKANLD 792
Query: 127 AAVTLQSQARMWRIRRRYCQVL-------NAVRIIQAYWRCRSCASRGFIKGQYRVTANQ 179
A + +Q+ ARMW RR+Y + L N++ IQA++R R + YR+ +
Sbjct: 793 AIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKA------QDDYRILVHA 846
Query: 180 LHLQLEIL 187
H L ++
Sbjct: 847 PHPPLSVV 854
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 36.2 bits (82), Expect = 0.020
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 64 KLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSR 123
K + AT IQ +WR +VRR + ++Q + R L+ + R + L
Sbjct: 810 KFLRRTKAATIIQKYWRMYVVRRRYKIRRAATIVLQSYLRGFLA---RNRYRKIL----- 861
Query: 124 KEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQLHLQ 183
+E AV +Q + R W R Y + ++A+ +Q +R R A R K + + + + +
Sbjct: 862 REHKAVIIQKRVRGWLARTHYKRSMHAIIYLQCCFR-RMMAKRELKKLKIEARSVERYKK 920
Query: 184 LEILLDS 190
L I +++
Sbjct: 921 LHIGMEN 927
Score = 33.1 bits (74), Expect = 0.17
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 62 QKKLSDKDTVAT-KIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
+K +DK A +IQ RG L+R+ L +A +Q + R ++ K
Sbjct: 759 EKLRADKLRAACIRIQKTIRGWLLRKKYLRMRKAAITMQRYVRGYQARCYAK-------- 810
Query: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
F R+ AA +Q RM+ +RRRY A ++Q+Y R
Sbjct: 811 FLRRTKAATIIQKYWRMYVVRRRYKIRRAATIVLQSYLR 849
>gi|215982791 myosin VA isoform 1 [Homo sapiens]
Length = 1855
Score = 36.2 bits (82), Expect = 0.020
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 64 KLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSR 123
K + AT IQ +WR +VRR + ++Q + R L+ + R + L
Sbjct: 810 KFLRRTKAATIIQKYWRMYVVRRRYKIRRAATIVLQSYLRGFLA---RNRYRKIL----- 861
Query: 124 KEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQLHLQ 183
+E AV +Q + R W R Y + ++A+ +Q +R R A R K + + + + +
Sbjct: 862 REHKAVIIQKRVRGWLARTHYKRSMHAIIYLQCCFR-RMMAKRELKKLKIEARSVERYKK 920
Query: 184 LEILLDS 190
L I +++
Sbjct: 921 LHIGMEN 927
Score = 33.1 bits (74), Expect = 0.17
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 62 QKKLSDKDTVAT-KIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
+K +DK A +IQ RG L+R+ L +A +Q + R ++ K
Sbjct: 759 EKLRADKLRAACIRIQKTIRGWLLRKKYLRMRKAAITMQRYVRGYQARCYAK-------- 810
Query: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAVRIIQAYWR 159
F R+ AA +Q RM+ +RRRY A ++Q+Y R
Sbjct: 811 FLRRTKAATIIQKYWRMYVVRRRYKIRRAATIVLQSYLR 849
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 35.4 bits (80), Expect = 0.034
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
+ E+Q ++ KE +++E +QK A+ K EA+ + E Q A E+ EK
Sbjct: 482 LRERQQEEQKEKLRKEEQEQK---------AKKKQEAEENEITEKQ--QKAKEEMEKKES 530
Query: 61 NQKKLSDKDTVATK 74
Q K DK+T A +
Sbjct: 531 EQAKKEDKETSAKR 544
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 35.4 bits (80), Expect = 0.034
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
+ E+Q ++ KE +++E +QK A+ K EA+ + E Q A E+ EK
Sbjct: 482 LRERQQEEQKEKLRKEEQEQK---------AKKKQEAEENEITEKQ--QKAKEEMEKKES 530
Query: 61 NQKKLSDKDTVATK 74
Q K DK+T A +
Sbjct: 531 EQAKKEDKETSAKR 544
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 35.4 bits (80), Expect = 0.034
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
+ E+Q ++ KE +++E +QK A+ K EA+ + E Q A E+ EK
Sbjct: 482 LRERQQEEQKEKLRKEEQEQK---------AKKKQEAEENEITEKQ--QKAKEEMEKKES 530
Query: 61 NQKKLSDKDTVATK 74
Q K DK+T A +
Sbjct: 531 EQAKKEDKETSAKR 544
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 35.0 bits (79), Expect = 0.045
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 15 EDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPENQKKLSDKDTVATK 74
+DE QK+ P + ++KA P ++ D+ + ++PP+NQK TV +
Sbjct: 136 DDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQ 195
Query: 75 IQA 77
+A
Sbjct: 196 TKA 198
Score = 28.1 bits (61), Expect = 5.5
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSLGAE---SKAEAKTPVLVETQTVDNANEKSEKP 58
E+K+P K K P P SLG + E + PV ++ ++++++S+
Sbjct: 277 EQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPV----ESSEDSSDESDSS 332
Query: 59 PENQKKLSDKDTVA 72
E +KK K V+
Sbjct: 333 SEEEKKPPTKAVVS 346
>gi|197313718 IQ motif containing G [Homo sapiens]
Length = 443
Score = 34.7 bits (78), Expect = 0.058
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAE----AKTPVLVETQTVDNANEKSE 56
+EE+ ++ K+ E +Q E+ + A A AK E +++ EK
Sbjct: 323 LEERLEFWMEKYDKDTEMKQNELNALKATKASDLAHLQDLAKMIREYEQVIIEDRIEKER 382
Query: 57 KPPENQKKLSDKDTVATKIQAWWRGTLVRRAL 88
+ ++ L + +V K+QAWWRGT++RR +
Sbjct: 383 SKKKVKQDLLELKSVI-KLQAWWRGTMIRREI 413
>gi|14165288 IQ motif containing G [Homo sapiens]
Length = 443
Score = 34.7 bits (78), Expect = 0.058
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAE----AKTPVLVETQTVDNANEKSE 56
+EE+ ++ K+ E +Q E+ + A A AK E +++ EK
Sbjct: 323 LEERLEFWMEKYDKDTEMKQNELNALKATKASDLAHLQDLAKMIREYEQVIIEDRIEKER 382
Query: 57 KPPENQKKLSDKDTVATKIQAWWRGTLVRRAL 88
+ ++ L + +V K+QAWWRGT++RR +
Sbjct: 383 SKKKVKQDLLELKSVI-KLQAWWRGTMIRREI 413
>gi|194328685 myosin IB isoform 1 [Homo sapiens]
Length = 1136
Score = 34.3 bits (77), Expect = 0.076
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 69 DTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAA 128
+ +AT IQ +RG R L S +I W+ RR A + + + + +A
Sbjct: 705 EDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWY----------RRYAQQKRYQQTKSSA 754
Query: 129 VTLQSQARMWRIRR--------RYCQVLNAVRIIQAYW 158
+ +QS R W+ R+ + C+ AV I AYW
Sbjct: 755 LVIQSYIRGWKARKILRELKHQKRCK--EAVTTIAAYW 790
>gi|44889481 myosin IB isoform 2 [Homo sapiens]
Length = 1078
Score = 34.3 bits (77), Expect = 0.076
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 69 DTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAA 128
+ +AT IQ +RG R L S +I W+ RR A + + + + +A
Sbjct: 705 EDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWY----------RRYAQQKRYQQTKSSA 754
Query: 129 VTLQSQARMWRIRR--------RYCQVLNAVRIIQAYW 158
+ +QS R W+ R+ + C+ AV I AYW
Sbjct: 755 LVIQSYIRGWKARKILRELKHQKRCK--EAVTTIAAYW 790
>gi|240120050 myosin IB isoform 1 [Homo sapiens]
Length = 1136
Score = 34.3 bits (77), Expect = 0.076
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 69 DTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAA 128
+ +AT IQ +RG R L S +I W+ RR A + + + + +A
Sbjct: 705 EDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWY----------RRYAQQKRYQQTKSSA 754
Query: 129 VTLQSQARMWRIRR--------RYCQVLNAVRIIQAYW 158
+ +QS R W+ R+ + C+ AV I AYW
Sbjct: 755 LVIQSYIRGWKARKILRELKHQKRCK--EAVTTIAAYW 790
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 34.3 bits (77), Expect = 0.076
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
+EE+ +KT E K+DE + KE + ES+ P++ EK ++P E
Sbjct: 813 IEEEAKEKTSEAPKKDEEKGKEGDSE----KESEKSDGDPIV--------DPEKEKEPKE 860
Query: 61 NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
Q+++ K+ V ++ + R T V R + LS + + +K + AA+E
Sbjct: 861 GQEEVL-KEVVESEGE---RKTKVERDIGEGNLSTAAAAA----LAAAAVKAKHLAAVEE 912
Query: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAV 151
K A+ +++Q + I+ R+ + L +
Sbjct: 913 RKIKSLVALLVETQMKKLEIKLRHFEELETI 943
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 34.3 bits (77), Expect = 0.076
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
+EE+ +KT E K+DE + KE + ES+ P++ EK ++P E
Sbjct: 782 IEEEAKEKTSEAPKKDEEKGKEGDSE----KESEKSDGDPIV--------DPEKEKEPKE 829
Query: 61 NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
Q+++ K+ V ++ + R T V R + LS + + +K + AA+E
Sbjct: 830 GQEEVL-KEVVESEGE---RKTKVERDIGEGNLSTAAAAA----LAAAAVKAKHLAAVEE 881
Query: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAV 151
K A+ +++Q + I+ R+ + L +
Sbjct: 882 RKIKSLVALLVETQMKKLEIKLRHFEELETI 912
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 34.3 bits (77), Expect = 0.076
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 1 MEEKQPQKTKEPSKEDEPQQKEMPTHLSLGAESKAEAKTPVLVETQTVDNANEKSEKPPE 60
+EE+ +KT E K+DE + KE + ES+ P++ EK ++P E
Sbjct: 813 IEEEAKEKTSEAPKKDEEKGKEGDSE----KESEKSDGDPIV--------DPEKEKEPKE 860
Query: 61 NQKKLSDKDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEA 120
Q+++ K+ V ++ + R T V R + LS + + +K + AA+E
Sbjct: 861 GQEEVL-KEVVESEGE---RKTKVERDIGEGNLSTAAAAA----LAAAAVKAKHLAAVEE 912
Query: 121 FSRKEWAAVTLQSQARMWRIRRRYCQVLNAV 151
K A+ +++Q + I+ R+ + L +
Sbjct: 913 RKIKSLVALLVETQMKKLEIKLRHFEELETI 943
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 33.9 bits (76), Expect = 0.099
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 2 EEKQPQKTKEPSKEDEPQQKEMPTHLSL--GAESKAEAKTPVLVETQTVDNANEKSEKPP 59
E+ T E S+ + P + ++ SL G S+ E P + V+N++ K ++P
Sbjct: 113 EDDDSASTSEESENENPHARGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQEPE 172
Query: 60 ENQKKLSDK 68
E +KK +K
Sbjct: 173 EKKKKKKEK 181
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.129 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,696,224
Number of Sequences: 37866
Number of extensions: 300494
Number of successful extensions: 2216
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1925
Number of HSP's gapped (non-prelim): 311
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.