SMARCC2 12728

Name: SMARCC2	Sequence: fasta or formatted (1130aa)		NCBI GI: 21237808
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform b		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [1152aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch... alt prot [1214aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 95 5 C cysteine 0.6 7 1 D aspartate 5.8 65 2 E glutamate 10.1 114 4 F phenylalanine 2.4 27 2 G glycine 6.4 72 3 H histidine 2.2 25 2 I isoleucine 2.9 33 3 K lysine 8.6 97 3 L leucine 6.5 74 4 M methionine 2.2 25 2 N asparagine 3.6 41 2 P proline 9.7 110 3 Q glutamine 5.0 56 5 R arginine 4.2 48 2 S serine 6.3 71 2 T threonine 5.7 64 2 V valine 6.1 69 2 W tryptophan 1.0 11 1 Y tyrosine 2.3 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.994 SWI/SNF-related matrix-associated actin-dependent r... SMARCC2 0.945 SWI/SNF-related matrix-associated actin-dependent re... SMARCC1 0.577 SWI/SNF-related matrix-associated actin-dependent r... FMNL1 0.023 formin-like 1 SFPQ 0.022 splicing factor proline/glutamine rich (polypyrimidin... WBP11 0.022 WW domain binding protein 11 VPS37C 0.021 vacuolar protein sorting 37C WAS 0.020 Wiskott-Aldrich syndrome protein FMN2 0.020 formin 2 PCLO 0.020 piccolo isoform 2 PCLO 0.020 piccolo isoform 1 CPSF6 0.019 cleavage and polyadenylation specific factor 6, 68 ... NCOR2 0.019 nuclear receptor co-repressor 2 isoform 1 CEL 0.019 carboxyl ester lipase precursor BRD4 0.019 bromodomain-containing protein 4 isoform long COL8A1 0.019 alpha 1 type VIII collagen precursor COL8A1 0.019 alpha 1 type VIII collagen precursor MYSM1 0.019 Myb-like, SWIRM and MPN domains 1 NACA 0.019 nascent polypeptide-associated complex alpha subuni... DIAPH1 0.018 diaphanous 1 isoform 2 DIAPH1 0.018 diaphanous 1 isoform 1 ESX1 0.018 extraembryonic, spermatogenesis, homeobox 1-like [Ho... FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 YLPM1 0.018 YLP motif containing 1 SAMD1 0.018 sterile alpha motif domain containing 1 ANXA11 0.018 annexin A11 ANXA11 0.018 annexin A11 ANXA11 0.018 annexin A11 NCOR2 0.018 nuclear receptor co-repressor 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.