Guide to the Human Genome
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Name: ZMYND12 Sequence: fasta or formatted (365aa) NCBI GI: 226246519
Description:

zinc finger, MYND-type containing 12 isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [255aa] zinc finger, MYND-type containing 12 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         32           2
 C cysteine            2.7         10           2
 D aspartate           4.1         15           1
 E glutamate           7.7         28           3
 F phenylalanine       3.3         12           1
 G glycine             3.8         14           2
 H histidine           3.6         13           1
 I isoleucine          6.0         22           1
 K lysine              5.2         19           2
 L leucine            13.4         49           3
 M methionine          1.9          7           2
 N asparagine          3.3         12           2
 P proline             2.5          9           1
 Q glutamine           6.6         24           2
 R arginine            4.1         15           2
 S serine              6.3         23           2
 T threonine           4.9         18           1
 V valine              4.9         18           2
 W tryptophan          0.8          3           1
 Y tyrosine            6.0         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, MYND-type containing 12 isoform 1 [Hom... 
ZMYND12               0.599   zinc finger, MYND-type containing 12 isoform 2 [Hom...
PDCD2                 0.020   programmed cell death 2 isoform 2 
PDCD2                 0.020   programmed cell death 2 isoform 1 
TDRD1                 0.016   tudor domain containing 1 
ZMYND17               0.016   zinc finger, MYND domain containing 17 
CBFA2T2               0.014   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.014   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.014   core-binding factor, runt domain, alpha subunit 2; tr...
EGLN1                 0.013   egl nine homolog 1 
RUNX1T1               0.011   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.011   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.011   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.011   acute myelogenous leukemia 1 translocation 1 protein ...
CBFA2T3               0.011   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.011   myeloid translocation gene on chromosome 16 isoform ...
LRRC16B               0.011   leucine rich repeat containing 16B 
TTC12                 0.010   tetratricopeptide repeat domain 12 
SMYD2                 0.008   SET and MYND domain containing 2 
C7orf20               0.007   hypothetical protein LOC51608 
ZMYND19               0.007   zinc finger, MYND domain containing 19 
APPBP2                0.007   amyloid beta precursor protein-binding protein 2 [Ho...
BCL2L13               0.007   BCL2-like 13 (apoptosis facilitator) 
ZMYND10               0.007   zinc finger, MYND domain-containing 10 
RWDD2A                0.007   RWD domain containing 2A 
DEAF1                 0.006   deformed epidermal autoregulatory factor 1 
LOC100294411          0.006   PREDICTED: similar to deformed epidermal autoregula...
DOCK4                 0.006   dedicator of cytokinesis 4 
NPHP3                 0.006   nephrocystin 3 
SMC5                  0.006   SMC5 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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