TDRD1 27015

Name: TDRD1	Sequence: fasta or formatted (1189aa)		NCBI GI: 38505161
Description: tudor domain containing 1		Referenced in: Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 60 1 C cysteine 3.4 41 3 D aspartate 4.7 56 2 E glutamate 7.3 87 3 F phenylalanine 3.0 36 2 G glycine 5.0 59 2 H histidine 2.1 25 1 I isoleucine 5.6 67 2 K lysine 7.8 93 2 L leucine 10.3 122 2 M methionine 2.0 24 1 N asparagine 6.3 75 2 P proline 5.7 68 2 Q glutamine 4.4 52 2 R arginine 3.0 36 2 S serine 7.7 92 3 T threonine 4.5 53 2 V valine 8.2 98 3 W tryptophan 1.0 12 1 Y tyrosine 2.8 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tudor domain containing 1 LOC100129278 0.048 PREDICTED: similar to tudor domain containing 1 [Ho... LOC100129278 0.048 PREDICTED: similar to tudor domain containing 1 [Ho... LOC100129278 0.048 PREDICTED: similar to tudor domain containing 1 [Ho... TDRD6 0.046 tudor domain containing 6 RNF17 0.039 ring finger protein 17 TDRD7 0.035 tudor domain containing 7 TDRKH 0.027 tudor and KH domain containing isoform a TDRKH 0.027 tudor and KH domain containing isoform b TDRKH 0.027 tudor and KH domain containing isoform a TDRKH 0.027 tudor and KH domain containing isoform a TDRD5 0.023 tudor domain containing 5 SND1 0.014 staphylococcal nuclease domain containing 1 AKAP1 0.013 A-kinase anchor protein 1 precursor STK31 0.013 serine/threonine kinase 31 isoform b STK31 0.013 serine/threonine kinase 31 isoform a STK31 0.013 serine/threonine kinase 31 isoform b TDRD9 0.013 tudor domain containing 9 ANKMY2 0.010 ankyrin repeat and MYND domain containing 2 SMYD2 0.009 SET and MYND domain containing 2 DEAF1 0.008 deformed epidermal autoregulatory factor 1 LOC100294411 0.008 PREDICTED: similar to deformed epidermal autoregula... EGLN1 0.008 egl nine homolog 1 CBFA2T3 0.008 myeloid translocation gene on chromosome 16 isoform ... CBFA2T3 0.008 myeloid translocation gene on chromosome 16 isoform ... RUNX1T1 0.008 acute myelogenous leukemia 1 translocation 1 protein... RUNX1T1 0.008 acute myelogenous leukemia 1 translocation 1 protein... RUNX1T1 0.008 acute myelogenous leukemia 1 translocation 1 protein... RUNX1T1 0.008 acute myelogenous leukemia 1 translocation 1 protein ... TDRD3 0.007 tudor domain containing 3 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.