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Search of human proteins with 222352129
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222352129 von Willebrand factor A domain containing 5B2
[Homo sapiens]
(1242 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 2560 0.0
gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 531 e-150
gi|194306644 BCSC-1 isoform 1 [Homo sapiens] 142 3e-33
gi|38195080 BCSC-1 isoform 1 [Homo sapiens] 142 3e-33
gi|38195082 BCSC-1 isoform 2 [Homo sapiens] 89 3e-17
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 67 8e-11
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 62 3e-09
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 1e-07
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 56 2e-07
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 56 2e-07
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 54 9e-07
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 53 2e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 3e-06
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 51 8e-06
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 50 1e-05
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 50 1e-05
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 50 2e-05
gi|41281612 zinc finger protein 828 [Homo sapiens] 49 4e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 48 5e-05
gi|27735129 hypothetical protein LOC148345 [Homo sapiens] 48 7e-05
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 48 7e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 47 9e-05
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 47 9e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 47 9e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 47 9e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 47 9e-05
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 47 9e-05
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 47 9e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 47 9e-05
gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo... 47 1e-04
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 2560 bits (6636), Expect = 0.0
Identities = 1242/1242 (100%), Positives = 1242/1242 (100%)
Query: 1 MPGLYCPSSWTPLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVS 60
MPGLYCPSSWTPLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVS
Sbjct: 1 MPGLYCPSSWTPLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVS 60
Query: 61 GFEAEAAGRRVSFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLP 120
GFEAEAAGRRVSFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLP
Sbjct: 61 GFEAEAAGRRVSFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLP 120
Query: 121 TGIIAAAGTMTVTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTS 180
TGIIAAAGTMTVTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTS
Sbjct: 121 TGIIAAAGTMTVTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTS 180
Query: 181 CFGVGSLQEEGLAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRA 240
CFGVGSLQEEGLAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRA
Sbjct: 181 CFGVGSLQEEGLAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRA 240
Query: 241 DAPPHASSAATICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARR 300
DAPPHASSAATICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARR
Sbjct: 241 DAPPHASSAATICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARR 300
Query: 301 DFQRLQRRDSDGDRQVWFLQRRFHKDILLNPVLALSFCPDLSSKPGHLGTATRELLFLLD 360
DFQRLQRRDSDGDRQVWFLQRRFHKDILLNPVLALSFCPDLSSKPGHLGTATRELLFLLD
Sbjct: 301 DFQRLQRRDSDGDRQVWFLQRRFHKDILLNPVLALSFCPDLSSKPGHLGTATRELLFLLD 360
Query: 361 SSSVAHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQLICESIETLQVP 420
SSSVAHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQLICESIETLQVP
Sbjct: 361 SSSVAHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQLICESIETLQVP 420
Query: 421 SGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAATTHRTLELMRWHRGTARCFSFGL 480
SGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAATTHRTLELMRWHRGTARCFSFGL
Sbjct: 421 SGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAATTHRTLELMRWHRGTARCFSFGL 480
Query: 481 GPTCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFVPDTVEAL 540
GPTCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFVPDTVEAL
Sbjct: 481 GPTCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFVPDTVEAL 540
Query: 541 LTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPG 600
LTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPG
Sbjct: 541 LTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPG 600
Query: 601 TEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSY 660
TEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSY
Sbjct: 601 TEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSY 660
Query: 661 IREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGS 720
IREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGS
Sbjct: 661 IREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGS 720
Query: 721 RSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILD 780
RSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILD
Sbjct: 721 RSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILD 780
Query: 781 GPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCH 840
GPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCH
Sbjct: 781 GPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCH 840
Query: 841 VVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQ 900
VVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQ
Sbjct: 841 VVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQ 900
Query: 901 LALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSE 960
LALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSE
Sbjct: 901 LALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSE 960
Query: 961 PAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGP 1020
PAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGP
Sbjct: 961 PAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGP 1020
Query: 1021 RRPPPRPPCRLSMGRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAPGSFRLDAPFCAAV 1080
RRPPPRPPCRLSMGRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAPGSFRLDAPFCAAV
Sbjct: 1021 RRPPPRPPCRLSMGRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAPGSFRLDAPFCAAV 1080
Query: 1081 RISQERLCRASPFAVHRASLSPTSASLPWALLGPGVGQGDSATASCSPSPSSGSEGPGQV 1140
RISQERLCRASPFAVHRASLSPTSASLPWALLGPGVGQGDSATASCSPSPSSGSEGPGQV
Sbjct: 1081 RISQERLCRASPFAVHRASLSPTSASLPWALLGPGVGQGDSATASCSPSPSSGSEGPGQV 1140
Query: 1141 DSGRGSDTEASEGAEGLGGTDLRGRTWATAVALAWLEHRCAAAFDEWELTAAKADCWLRA 1200
DSGRGSDTEASEGAEGLGGTDLRGRTWATAVALAWLEHRCAAAFDEWELTAAKADCWLRA
Sbjct: 1141 DSGRGSDTEASEGAEGLGGTDLRGRTWATAVALAWLEHRCAAAFDEWELTAAKADCWLRA 1200
Query: 1201 QHLPDGLDLAALKAAARGLFLLLRHWDQNLQLHLLCYSPANV 1242
QHLPDGLDLAALKAAARGLFLLLRHWDQNLQLHLLCYSPANV
Sbjct: 1201 QHLPDGLDLAALKAAARGLFLLLRHWDQNLQLHLLCYSPANV 1242
>gi|210147462 von Willebrand factor A domain containing 5B1 [Homo
sapiens]
Length = 1215
Score = 531 bits (1368), Expect = e-150
Identities = 414/1315 (31%), Positives = 612/1315 (46%), Gaps = 179/1315 (13%)
Query: 1 MPGLYCPSSWTPLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVS 60
MPGL + LPLT S V +C +G L + A LTY N + QP G+FVYPL E V
Sbjct: 1 MPGLLNWITGAALPLTASDVTSCVSGYALGLTASLTYGNLEAQPFQGLFVYPLDECTTVI 60
Query: 61 GFEAEAAGRRVSFQLQSRR------------RSQAACCRALGPGLGTPTPRRCAQGHLVL 108
GFEA A R V+ Q++ + RS L G+ P C G + L
Sbjct: 61 GFEAVIADRVVTVQIKDKAKLESGHFDASHVRSPTVTGNILQDGVSI-APHSCTPGKVTL 119
Query: 109 DLAQARSTLVLPTGIIAAAGTMTVTLHSSRELPSRPDGVLHVALPTVLTPLAPP---GPP 165
D R V G IA +T+ + +S ELP+ P G + V LP V P P
Sbjct: 120 DEDLERILFVANLGTIAPMENVTIFISTSSELPTLPSGAVRVLLPAVCAPTVPQFCTKST 179
Query: 166 GPPRPPGLCDDSPTSCFGVGSLQEEGLAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGP 225
G D CFG + +W +L + + P Y F+F++ + GP
Sbjct: 180 GTSNQQAQGKDR--HCFGAWAPG----SWNKLCLAT-LLNTEVSNPMEYEFNFQLEIRGP 232
Query: 226 CLLAGLESPSHALRADAPPHASSAATICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGG 285
CLLAG+ESP+H +RADA P A SA +I +TLA H DR +EIL+HPSEPH PH+++E G
Sbjct: 233 CLLAGVESPTHEIRADAAPSARSAKSIIITLANKHTFDRPVEILIHPSEPHMPHVLIEKG 292
Query: 286 SLSSAEYEARVRARRDFQRLQRRDSDGDRQVWFLQRRFHKDILLNPVLALSFCPDLSSKP 345
++ E++ ++ R DF + ++ S +R+ +++R HKDI + V+ L+FCPDL S
Sbjct: 293 DMTLGEFDQHLKGRTDFIKGMKKKSRAERKTEIIRKRLHKDIPHHSVIMLNFCPDLQSVQ 352
Query: 346 GHLGTATRELLFLLDSSSVAH-------KDAIVLAVKSLPPQTLINLAVFGTLVQPLFPE 398
L A E +FL+D SS KDA+++A+KSL P L N+ FG+ + LFP
Sbjct: 353 PCLRKAHGEFIFLIDRSSSMSGISMHRVKDAMLVALKSLMPACLFNIIGFGSTFKSLFPS 412
Query: 399 SRPCSDDAVQLICESIETLQVPSGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAAT 458
S+ S+D++ + C+ I+ ++ G ++L+ L W + QP HR +PR LF++T +
Sbjct: 413 SQTYSEDSLAMACDDIQRMKADMGGTNILSPLKWVIRQPVHRGHPRLLFVITDGA--VNN 470
Query: 459 THRTLELMRWHRGTARCFSFGLGP-TCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALR 517
T + LEL+R H + RC+SFG+GP CH+L++GL+++S G A L G+RLQP +V++L+
Sbjct: 471 TGKVLELVRNHAFSTRCYSFGIGPNVCHRLVKGLASVSEGSAELLMEGERLQPKMVKSLK 530
Query: 518 KALEPALSDISVDWFVPDTVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQEP 577
KA+ P LSD++V+W P+T E L++P +L+PG++L+GY + S P +
Sbjct: 531 KAMAPVLSDVTVEWIFPETTEVLVSPVSASSLFPGERLVGYGIVCDASLHISNPRSDKRR 590
Query: 578 GW-----QSSGGSVFPSPEE----------APSAASPGTEPTGTSEPLGTGTVSAELSSP 622
+ Q SG SVF ++ A ++ +P + L +G + +
Sbjct: 591 RYSMLHSQESGSSVFYHSQDDGPGLEGGDCAKNSGAPFILGQAKNARLASGDSTTKHDLN 650
Query: 623 WAARDSEQSTDALTD--------PVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASP 674
+ R ST+ +T+ +DP P + + Q + +
Sbjct: 651 LSQRRRAYSTNQITNHKPLPRATMASDPMPAAKRYPLRKARLQDLTNQTSLDVQRWQIDL 710
Query: 675 EPGPGS-TGSSESPGSQGPGSPEGSAPLEPPSQQGCRS-LAWGEPAGSRSCPLPAPTPAP 732
+P S ++ P +GPG+ S L P QGC+ L WG+ + S P+ T
Sbjct: 711 QPLLNSGQDLNQGPKLRGPGARRPS--LLP---QGCQPFLPWGQETQAWS-PVRERTSDS 764
Query: 733 FKVGALSTEVLGRQHRAALAGRSLSS-PPGRANQVPGRPRKPSLGAILDGPSPEPGQQLG 791
G L H +A + S P +Q P +P+ P+P G+ L
Sbjct: 765 RSPGDLEPS----HHPSAFETETSSDWDPPAESQERASPSRPAT------PAPVLGKALV 814
Query: 792 QGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQP 851
+GL DS L W++ S EL P
Sbjct: 815 KGLHDSQRL------QWEV-------------SFELGTP--------------------- 834
Query: 852 MCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETTA 911
GP G + W + H L A +++RD EQLA R G
Sbjct: 835 -------------GPERGGAQDAD-----LWSETFHHLAARAIIRDFEQLAEREG---EI 873
Query: 912 DRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPA--------- 962
++G RR + AL TSK + S +T V VD + LP ++ +S A
Sbjct: 874 EQGSNRRYQVSALHTSKACNIISKYTAFVPVDVSKSRYLPTVVEYPNSGAALRMLGSRAL 933
Query: 963 --EPPGTP-----PASHSHLDAAP------LPTVVYSKGLQRG-SPAGAWDSDQNGNSKR 1008
+ GT P + D+AP PT ++S+ G GA + Q +
Sbjct: 934 AQQWRGTSSGFGRPQTMLGEDSAPGNDMEASPTALFSEARSPGREKHGASEGPQRSLATN 993
Query: 1009 ALGD-PATPTEGPRRPPPRPPCRLSMGRRHKLCSPDPGQANNSEGS-DHDYLPLVRLQEA 1066
L A+ L+ + L P ++ G+ DY+PLV LQ A
Sbjct: 994 TLSSMKASENLFGSWLNLNKSRLLTRAAKGFLSKPLIKAVESTSGNQSFDYIPLVSLQLA 1053
Query: 1067 PGSFRLDAPFCAAVRISQERLCRASPFAVHRASLS--PTSASLPWALLGPGVGQGDSATA 1124
G+F L+ FC A I E+L SPF HR SL+ P+ + P L T+
Sbjct: 1054 SGAFLLNEAFCEATHIPMEKLKWTSPFTCHRVSLTTRPSESKTPSPQL---------CTS 1104
Query: 1125 SCSPSPSSGSEGPGQVDSGRGSDTEASEGAEGLGGTDLRGRTWATAVALAWLEHRCAAAF 1184
S PS S + G+ G E + G+ WAT V LAWLEH A+ F
Sbjct: 1105 SPPRHPSCDSFSLEPLAKGK-------LGLEPRAVVEHTGKLWATVVGLAWLEHSSASYF 1157
Query: 1185 DEWELTAAKADCWLRAQHLPDGLDLAALKAAARGLFLLLRHWDQNLQLHLLCYSP 1239
EWEL AAKA+ WL Q +P+G LKAAAR LF+LLRHWD+NL+ ++LCY+P
Sbjct: 1158 TEWELVAAKANSWLEQQEVPEGRTQGTLKAAARQLFVLLRHWDENLEFNMLCYNP 1212
>gi|194306644 BCSC-1 isoform 1 [Homo sapiens]
Length = 786
Score = 142 bits (357), Expect = 3e-33
Identities = 133/568 (23%), Positives = 228/568 (40%), Gaps = 96/568 (16%)
Query: 12 PLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVSGFEAEAAGRRV 71
P+PL V V A L Y N + P++ FV+P+ E V FEA G+++
Sbjct: 14 PVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKI 73
Query: 72 SFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLPTGIIAAAGTMT 131
+LQ + +++ +A+ G Q L+ + +R G +
Sbjct: 74 VAELQDKMKARTNYEKAISQG---------HQAFLLEGDSSSRDVFSCNVGNLQPGSKAA 124
Query: 132 VTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTSCFGVGSLQEEG 191
VTL +ELP DG L LP VL P S SC V +
Sbjct: 125 VTLKYVQELPLEADGALRFVLPAVLNPRYQ-----------FSGSSKDSCLNVKT----- 168
Query: 192 LAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADAPPHASSAAT 251
+ D+ PYT S + + ++S + ++A
Sbjct: 169 ----PIVPVEDL---------PYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQ 215
Query: 252 ICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARRDFQRLQRRDSD 311
V+LA GH DR +E+L++ +E H P ++LE G
Sbjct: 216 --VSLAAGHKFDRDVELLIYYNEVHTPSVVLEMG-------------------------- 247
Query: 312 GDRQVWFLQRRFHKDILLNPVLALSFCPDL-SSKPGHLGTATRELLFLLDSSSV------ 364
+ ++ +P +SF P++ +P + E +FL+D S
Sbjct: 248 -------MPNMKPGHLMGDPSAMVSFYPNIPEDQPSN---TCGEFIFLMDRSGSMQSPMS 297
Query: 365 ----------AHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQLICESI 414
A K+ ++L +KSLP N+ FG+ + FPES + ++ +
Sbjct: 298 SQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRV 357
Query: 415 ETLQVPSGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAATTHRTLELMRWHRGTAR 474
+ +Q G ++LA L P +P QLF+ T T ++ +R +R R
Sbjct: 358 KLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGE--VTDTFSVIKEVRINRQKHR 415
Query: 475 CFSFGLGP-TCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFV 533
CFSFG+G T L++G++ S G + F+ R+Q ++ L+++L+P + D+S+ W +
Sbjct: 416 CFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHL 475
Query: 534 PDTVEALLTPREIPALYPGDQLLGYCSL 561
P + A + E ++ G +L+ Y L
Sbjct: 476 PPGLSAKMLSPEQTVIFRGQRLISYAQL 503
Score = 33.5 bits (75), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 1167 WATAVALAWLEHRCAAAFDEWELTAAKADCWLRA 1200
WAT +A+ WL EWEL KA W+RA
Sbjct: 725 WATILAVIWLHSNGKDLKCEWELLERKAVAWMRA 758
>gi|38195080 BCSC-1 isoform 1 [Homo sapiens]
Length = 786
Score = 142 bits (357), Expect = 3e-33
Identities = 133/568 (23%), Positives = 228/568 (40%), Gaps = 96/568 (16%)
Query: 12 PLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVSGFEAEAAGRRV 71
P+PL V V A L Y N + P++ FV+P+ E V FEA G+++
Sbjct: 14 PVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKI 73
Query: 72 SFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLPTGIIAAAGTMT 131
+LQ + +++ +A+ G Q L+ + +R G +
Sbjct: 74 VAELQDKMKARTNYEKAISQG---------HQAFLLEGDSSSRDVFSCNVGNLQPGSKAA 124
Query: 132 VTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTSCFGVGSLQEEG 191
VTL +ELP DG L LP VL P S SC V +
Sbjct: 125 VTLKYVQELPLEADGALRFVLPAVLNPRYQ-----------FSGSSKDSCLNVKT----- 168
Query: 192 LAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADAPPHASSAAT 251
+ D+ PYT S + + ++S + ++A
Sbjct: 169 ----PIVPVEDL---------PYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQ 215
Query: 252 ICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARRDFQRLQRRDSD 311
V+LA GH DR +E+L++ +E H P ++LE G
Sbjct: 216 --VSLAAGHKFDRDVELLIYYNEVHTPSVVLEMG-------------------------- 247
Query: 312 GDRQVWFLQRRFHKDILLNPVLALSFCPDL-SSKPGHLGTATRELLFLLDSSSV------ 364
+ ++ +P +SF P++ +P + E +FL+D S
Sbjct: 248 -------MPNMKPGHLMGDPSAMVSFYPNIPEDQPSN---TCGEFIFLMDRSGSMQSPMS 297
Query: 365 ----------AHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQLICESI 414
A K+ ++L +KSLP N+ FG+ + FPES + ++ +
Sbjct: 298 SQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRV 357
Query: 415 ETLQVPSGPPDVLAALDWAVGQPQHRAYPRQLFLLTAASPMAATTHRTLELMRWHRGTAR 474
+ +Q G ++LA L P +P QLF+ T T ++ +R +R R
Sbjct: 358 KLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGE--VTDTFSVIKEVRINRQKHR 415
Query: 475 CFSFGLGP-TCHQLLQGLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFV 533
CFSFG+G T L++G++ S G + F+ R+Q ++ L+++L+P + D+S+ W +
Sbjct: 416 CFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHL 475
Query: 534 PDTVEALLTPREIPALYPGDQLLGYCSL 561
P + A + E ++ G +L+ Y L
Sbjct: 476 PPGLSAKMLSPEQTVIFRGQRLISYAQL 503
Score = 33.5 bits (75), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 1167 WATAVALAWLEHRCAAAFDEWELTAAKADCWLRA 1200
WAT +A+ WL EWEL KA W+RA
Sbjct: 725 WATILAVIWLHSNGKDLKCEWELLERKAVAWMRA 758
>gi|38195082 BCSC-1 isoform 2 [Homo sapiens]
Length = 415
Score = 88.6 bits (218), Expect = 3e-17
Identities = 104/461 (22%), Positives = 170/461 (36%), Gaps = 103/461 (22%)
Query: 12 PLPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVSGFEAEAAGRRV 71
P+PL V V A L Y N + P++ FV+P+ E V FEA G+++
Sbjct: 14 PVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKI 73
Query: 72 SFQLQSRRRSQAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLPTGIIAAAGTMT 131
+LQ + +++ +A+ G Q L+ + +R G +
Sbjct: 74 VAELQDKMKARTNYEKAISQG---------HQAFLLEGDSSSRDVFSCNVGNLQPGSKAA 124
Query: 132 VTLHSSRELPSRPDGVLHVALPTVLTPLAPPGPPGPPRPPGLCDDSPTSCFGVGSLQEEG 191
VTL +ELP DG L LP VL P S SC V +
Sbjct: 125 VTLKYVQELPLEADGALRFVLPAVLNPRYQ-----------FSGSSKDSCLNVKT----- 168
Query: 192 LAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLE-----SPSHALRADAPPHA 246
+ D+ PYT S + + ++ SP+ L D
Sbjct: 169 ----PIVPVEDL---------PYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGED----- 210
Query: 247 SSAATICVTLAEGHHCDRALEILLHPSEPHQPHLMLEGGSLSSAEYEARVRARRDFQRLQ 306
+ V+LA GH DR +E+L++ +E H P ++LE G
Sbjct: 211 --KTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMG--------------------- 247
Query: 307 RRDSDGDRQVWFLQRRFHKDILLNPVLALSFCPDL-SSKPGHLGTATRELLFLLDSSS-- 363
+ ++ +P +SF P++ +P + E +FL+D S
Sbjct: 248 ------------MPNMKPGHLMGDPSAMVSFYPNIPEDQPSN---TCGEFIFLMDRSGSM 292
Query: 364 --------------VAHKDAIVLAVKSLPPQTLINLAVFGTLVQPLFPESRPCSDDAVQL 409
A K+ ++L +KSLP N+ FG+ + FPES + ++
Sbjct: 293 QSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEE 352
Query: 410 ICESIETLQVPSGPPDVLAALDWAVGQPQHRAYPRQLFLLT 450
++ +Q G ++LA L P +P QLF+ T
Sbjct: 353 ALGRVKLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFT 393
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 855
Score = 67.4 bits (163), Expect = 8e-11
Identities = 142/596 (23%), Positives = 197/596 (33%), Gaps = 52/596 (8%)
Query: 588 PSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPS 647
PSP A + + GTE G P + P + S S + T+P PS
Sbjct: 172 PSPAMARRSRAAGTE-VGLPRPAPSARPRPPTEGPRKSVSSA-SEHSTTEPSPAARRRPS 229
Query: 648 DTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQ 707
+R S T S+ GP + G+ +P P+G L PP
Sbjct: 230 AGGGLQRPASRSLSSSA---TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVT 286
Query: 708 GCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVP 767
R A S PL P+P+ + H ++L + L++P A P
Sbjct: 287 PPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQ-LATPLPLAPPSP 345
Query: 768 GRPRKPSLGAILDGPSPEPGQ---QLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPS 824
P PSL + P+ P Q LG + + P+P + PP PP+
Sbjct: 346 SAP--PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP----QAPPA 399
Query: 825 GELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQ 884
L PP P +P + L P + + L P S PPSPPV +A +
Sbjct: 400 LAL-PPLQAPPSPPASPPLSPLATPSPQA-PNALAVHLLQAP--FSPPPSPPV-QAPFSP 454
Query: 885 ALHRLTAASVVRDNEQLALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDA 944
+ S ++ + T + P P+ +
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 945 TTREVLPG----ALQVCSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDS 1000
+ P LQ S PA PG P S S A LP + + P A
Sbjct: 515 PPPQAPPALATPPLQALPSPPASFPGQAPFSPS----ASLPMSPLATPPPQAPPVLAAPL 570
Query: 1001 DQNGNSKRALGDPATPT-EGPRRPP-PRPPCRLSMGRRHKLCSPDP------GQANNSEG 1052
Q S PA+PT + PRRPP P P +S R +P P ++ G
Sbjct: 571 LQVPPS-----PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG 625
Query: 1053 SD---HDYLPLVRLQEAPGSFRLDAPFCAAVRISQERLCRASPFAVHRASLSPTS----- 1104
D H +E G AA L P A R P +
Sbjct: 626 PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP 685
Query: 1105 -ASLPW-ALLGPGVGQGDSATASCSPSPSSGSEGPGQVDSGRGSDTEASEGAEGLG 1158
A LPW GPG G T + P S + PG +D G T + A G G
Sbjct: 686 GAPLPWPPATGPGSADG-LCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 740
Score = 49.3 bits (116), Expect = 2e-05
Identities = 143/524 (27%), Positives = 178/524 (33%), Gaps = 108/524 (20%)
Query: 506 QRLQPMLVQALRKALEPALSDISVDWFVPDTVEALL---TPREIPALYPGDQLLGYCSLF 562
Q L+P V RK PAL +S + A L P +PA L C L
Sbjct: 278 QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT--CQL- 334
Query: 563 RVDGFRSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAE---L 619
PP P PS + PS P T P+ + LG+ T+ A L
Sbjct: 335 -ATPLPLAPPSPSAP----------PSLQTLPS--PPATPPSQATTSLGSPTLQATHSFL 381
Query: 620 SSP---WAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEP 676
SP A Q+ AL P P+P + + S + H +P
Sbjct: 382 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS 441
Query: 677 GPGSTGSSESPGSQGPGSPEGSAPLEP---PSQQGCRSLA----WGEPAGSRSCPL-PAP 728
P SP Q P SP S P+ P P Q SLA P+ S P+ P+
Sbjct: 442 PP------PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 495
Query: 729 TPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQ 788
TP P L+ L L+ PP Q P P L A+ PSP P
Sbjct: 496 TPPPQAPPPLAAPPL-----------QLAKPP---PQAPPALATPPLQAL---PSP-PAS 537
Query: 789 QLGQGLDDSGNLLSPAPMDWDMLMEPPFL---FTAVPPSGELAPPAVPP-QAPRCHVVIR 844
GQ L +P+ PP L VPPS PPA P QAPR
Sbjct: 538 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS----PPASPTLQAPRRPPT-- 591
Query: 845 GLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVRE-----AAWDQALHRLTAASVVRDNE 899
P G L PG PP PP R + D A H +A S +
Sbjct: 592 ----PGPDTSVSGPRLTLALAPG----PPPPPSRSPSSTLSGPDLAGHSSSATSTPEE-- 641
Query: 900 QLALRG---GAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQV 956
LRG G E A L A + S P+ P+A LP
Sbjct: 642 ---LRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA---PPLAFRGAPGAPLPW---- 691
Query: 957 CSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPA-GAWD 999
PP T P S A L T+ ++G + +PA GA D
Sbjct: 692 -------PPATGPGS-----ADGLCTIYETEGPESATPAPGALD 723
Score = 39.3 bits (90), Expect = 0.024
Identities = 151/630 (23%), Positives = 200/630 (31%), Gaps = 112/630 (17%)
Query: 569 SRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTG--TVSAELS-----S 621
SRPP + P P +P AS T P PLG +SAE + +
Sbjct: 92 SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPG----PLGQKGLRISAEETVARGKA 147
Query: 622 PWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGST 681
A + S S A D + P P A+ RR S + L + S P P +
Sbjct: 148 TEAPKRSALSAGARRD-TSGPTPGTPSPAMARR---SRAAGTEVGLPRPAPSARPRPPTE 203
Query: 682 GSSESPGSQGPGSPEGSAPL--EPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALS 739
G +S S S +P PS G S + PL +P
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSP----------- 252
Query: 740 TEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLD--DS 797
A +G S P RA P +P+ L A+ P + L S
Sbjct: 253 ----------ARSGPSARGTP-RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 798 GNLLSPAPMDWDMLMEPPFLFTAVPPSGEL----------APPAVPPQAPRCHVVIRGLC 847
L +P+P PP L A P S L APP+ P AP
Sbjct: 302 SPLATPSPSAALQSQAPPTL-PATPHSSSLTCQLATPLPLAPPS--PSAPP--------- 349
Query: 848 GEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGA 907
L+TL PP+ P +A L A + L+
Sbjct: 350 -----------SLQTL------PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATP 392
Query: 908 ETTADRGHARRCWLRALQTSKVSSA-----PSCFTCPVAVDATTREVLPGALQVCSSEPA 962
A A L LQ A P P A +A +L S P
Sbjct: 393 PPQAPPALA----LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 448
Query: 963 E----PPGTPPASHSHLDAAPLPTVVYSKGLQ--RGSPAGAWDSDQNGNSKRALGDPATP 1016
+ PP +PP S S + P + + LQ PA S +A A P
Sbjct: 449 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508
Query: 1017 TEGPRRPPPRPPCRLSMGRRHKLCSPD---PGQANNSEGSDHDYLPLVRLQEAPGSFRLD 1073
+PPP+ P L+ L SP PGQA S + LP+ L P
Sbjct: 509 PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS---LPMSPLATPPPQ---A 562
Query: 1074 APFCAAVRISQERLCRASPFAVHRASLSPTSASLPWALLGP--GVGQGDSATASCSPSPS 1131
P AA + ASP +A P + ++ GP + S SPS
Sbjct: 563 PPVLAAPLLQVPPSPPASP--TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS 620
Query: 1132 SGSEGPGQVDSGRGSDTEASEGAEGLGGTD 1161
S GP G + A+ E L G D
Sbjct: 621 STLSGPDLA----GHSSSATSTPEELRGYD 646
Score = 34.7 bits (78), Expect = 0.58
Identities = 95/371 (25%), Positives = 122/371 (32%), Gaps = 56/371 (15%)
Query: 815 PFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEV-GVGLETL------WGP- 866
P L T PP PP V P A R + G G +P+ G+G T+ GP
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRV-LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPT 80
Query: 867 --------GDGSQPP-------SPPVREAAWDQALHRLTAASVVRDNE--QLALRGGAET 909
S+PP +PP + + A+ R Q LR AE
Sbjct: 81 RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140
Query: 910 TADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEP----P 965
T RG A R+ ++ S T A R +V PA P
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 966 GTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGPRRP-- 1023
T S A+ T S +R AG + R+L ATP P R
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAG---GGLQRPASRSLSSSATPLSSPARSGP 257
Query: 1024 ----PPRPPCRLSMGRRHKLCSPDPGQANNSEGSDHDYLP-LVRLQEAPGSFRLDAPFCA 1078
PR P S + L + P Q D P L L +P L P +
Sbjct: 258 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPR---KDAAPALGPLSSSP----LATPSPS 310
Query: 1079 AVRISQERLCRASPFAVHRASLSPTSAS-LPWALLGPGVGQGDSATASCSPSPSSGSEGP 1137
A SQ P H +SL+ A+ LP A P SA S PS + P
Sbjct: 311 AALQSQAP--PTLPATPHSSSLTCQLATPLPLAPPSP------SAPPSLQTLPSPPATPP 362
Query: 1138 GQVDSGRGSDT 1148
Q + GS T
Sbjct: 363 SQATTSLGSPT 373
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 62.4 bits (150), Expect = 3e-09
Identities = 158/655 (24%), Positives = 216/655 (32%), Gaps = 101/655 (15%)
Query: 569 SRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTG--TVSAELS------ 620
SRPP + P P +P AS T P PLG +SAE +
Sbjct: 83 SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP----GPLGQKGLRISAEETVARGKA 138
Query: 621 ---------SPWAARDSEQSTDALTDPV---------TDPG-PNPSDTAIWRRIFQSSYI 661
S A RD+ T P T+ G P P+ +A R +
Sbjct: 139 TEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRK 198
Query: 662 REQYVLTHCSASPEPG----PGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSL----- 712
H + P P P + G + P S+ S + PL P++ G +
Sbjct: 199 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS--SATPLSSPARSGPSARGTPRA 256
Query: 713 ----AWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPG 768
+ +P G ++ P TP P K A LG + LA S S+PP P
Sbjct: 257 PAHPSQPKPKGLQALRPPQVTP-PRKDAA---PALGPLSSSPLATPSPSAPPS-----PS 307
Query: 769 RPRKPSLGAILDGPSPEPGQ---QLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSG 825
P PSL + P+ P Q LG + + P+P + PP PP+
Sbjct: 308 AP--PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP----QAPPAL 361
Query: 826 ELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQA 885
L PP P +P + L P + + L P S PPSPPV +A +
Sbjct: 362 AL-PPLQAPPSPPASPPLSPLATPSPQA-PNALAVHLLQAP--FSPPPSPPV-QAPFSPP 416
Query: 886 LHRLTAASVVRDNEQLALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDAT 945
+ S ++ + T + P P+ +
Sbjct: 417 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 476
Query: 946 TREVLPG----ALQVCSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSD 1001
+ P LQ S PA PG P S S A LP + + P A
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAPFSPS----ASLPMSPLATPPPQAPPVLAAPLL 532
Query: 1002 QNGNSKRALGDPATPT-EGPRRPP-PRPPCRLSMGRRHKLCSPDP------GQANNSEGS 1053
Q S PA+PT + PRRPP P P +S R +P P ++ G
Sbjct: 533 QVPPS-----PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 587
Query: 1054 D---HDYLPLVRLQEAPGSFRLDAPFCAAVRISQERLCRASPFAVHRASLSPTS------ 1104
D H +E G AA L P A R P +
Sbjct: 588 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG 647
Query: 1105 ASLPW-ALLGPGVGQGDSATASCSPSPSSGSEGPGQVDSGRGSDTEASEGAEGLG 1158
A LPW GPG G T + P S + PG +D G T + A G G
Sbjct: 648 APLPWPPATGPGSADG-LCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 701
Score = 41.6 bits (96), Expect = 0.005
Identities = 96/398 (24%), Positives = 123/398 (30%), Gaps = 43/398 (10%)
Query: 506 QRLQPMLVQALRKALEPALSDISVDWFVPDTVEALLTPREIPALY--------PGDQL-- 555
Q L+P V RK PAL +S + A +P P+L P Q
Sbjct: 269 QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATT 328
Query: 556 -LGYCSLFRVDGFRSRPPGGQ--EPGWQSSGGSVFPSPEEAPSA-ASPGTEPTGTSEPLG 611
LG +L F PP P Q+ P + PS ASP P T P
Sbjct: 329 SLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQA 388
Query: 612 TGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCS 671
++ L + A P P +PS T + S V
Sbjct: 389 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP-SQAPPSLAAPPLQVPPSPP 447
Query: 672 ASPEPGPGSTGSSESPGSQGPGSPEGSAPLE--PPSQQGCRSLAWGEPAGSRSCPLPAPT 729
ASP P +T ++P P + PL+ P Q +LA S P P
Sbjct: 448 ASPPMSPSATPPPQAP------PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPG 501
Query: 730 PAPFKVGA-LSTEVLGR---QHRAALAGRSLSSPPGRAN----QVPGRPRKPSLG----- 776
APF A L L Q LA L PP Q P RP P
Sbjct: 502 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 561
Query: 777 -----AILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPA 831
A+ GP P P + L SG L+ E + + P G A P
Sbjct: 562 PRLTLALAPGPPPPPSRSPSSTL--SGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 619
Query: 832 VPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDG 869
+ CH P+ + G W P G
Sbjct: 620 PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATG 657
Score = 38.9 bits (89), Expect = 0.031
Identities = 78/290 (26%), Positives = 94/290 (32%), Gaps = 62/290 (21%)
Query: 568 RSRPPGG---QEPGWQSSGGSVFPSPEEA---PSAASPGTEPTGTSEPLGTGTVSAELSS 621
R RP G Q P +S S P A PSA P S+P G + L
Sbjct: 216 RRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA--LRP 273
Query: 622 PWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGST 681
P + + AL + P PS +A S + T S P +T
Sbjct: 274 PQVTPPRKDAAPALGPLSSSPLATPSPSA------PPSPSAPPSLQTLPSPPATPPSQAT 327
Query: 682 GSSESPGSQGPGSPEGSAPLEP---PSQQGCRSLAW----GEPAGSRSCPL-PAPTPAPF 733
S SP Q S S PL P P Q +LA P+ S PL P TP+P
Sbjct: 328 TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ 387
Query: 734 KVGALSTEVLGRQHRAALAGRSLSSPPGRANQVP-GRPRKPSLGAILDGPSPEPGQQLGQ 792
AL+ +L S PP Q P P P + PS P
Sbjct: 388 APNALAVHLLQAP---------FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS---- 434
Query: 793 GLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPP-----AVPPQAP 837
L PP VPPS +PP PPQAP
Sbjct: 435 ------------------LAAPPL---QVPPSPPASPPMSPSATPPPQAP 463
Score = 37.7 bits (86), Expect = 0.069
Identities = 60/231 (25%), Positives = 78/231 (33%), Gaps = 24/231 (10%)
Query: 815 PFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEV-GVGLETL------WGPG 867
P L T PP PP V P A R + G G +P+ G+G T+ GP
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRV-LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPT 80
Query: 868 DGSQPP-------SPPVREAAWDQALHRLTAASVVRDNE--QLALRGGAETTADRGHARR 918
S+PP +PP + + A+ R Q LR AE T RG A
Sbjct: 81 RTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATE 140
Query: 919 CWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEP----PGTPPASHSH 974
R+ ++ S T A R +V PA P T S
Sbjct: 141 APKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSV 200
Query: 975 LDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGPRRPPP 1025
A+ T S +R AG + R+L ATP P R P
Sbjct: 201 SSASEHSTTEPSPAARRRPSAG---GGLQRPASRSLSSSATPLSSPARSGP 248
Score = 35.0 bits (79), Expect = 0.45
Identities = 143/616 (23%), Positives = 198/616 (32%), Gaps = 90/616 (14%)
Query: 574 GQEPGWQSSGGSVFPS-PEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQST 632
G++P + +GG + PE AP A PT TS P +G E + P +
Sbjct: 54 GRKPLAERAGGIGGATIPESAPRAG-----PTRTSRPPASGR--GERAPP--------AK 98
Query: 633 DALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGP 692
+ PV+ PG T + I + + A+ P + + + GP
Sbjct: 99 NTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGP 158
Query: 693 GSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALA 752
P P RS A G G P PAP+ P TE G + + A
Sbjct: 159 ------TPGTPSPAMARRSRAAGTEVG---LPRPAPSARPRP----PTE--GPRKSVSSA 203
Query: 753 GRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEP--------GQQLGQGLDDSGNLLSPA 804
++ P P R+PS G L P+ G G +PA
Sbjct: 204 SEHSTTEPS-----PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA 258
Query: 805 PMDWDMLMEPPFLFTAVPPSGELAPP---AVPPQAPRCHVVIRGLCGEQPMCWEVGVGLE 861
+P L PP ++ PP A P P + P L+
Sbjct: 259 HPSQP---KPKGLQALRPP--QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313
Query: 862 TLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETTADRGHARRCWL 921
TL PP+ P +A L A + L+ A A L
Sbjct: 314 TL------PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA----L 363
Query: 922 RALQTSKVSSA-----PSCFTCPVAVDATTREVLPGALQVCSSEPAE----PPGTPPASH 972
LQ A P P A +A +L S P + PP +PP S
Sbjct: 364 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 423
Query: 973 SHLDAAPLPTVVYSKGLQ--RGSPAGAWDSDQNGNSKRALGDPATPTEGPRRPPPRPPCR 1030
S + P + + LQ PA S +A A P +PPP+ P
Sbjct: 424 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 483
Query: 1031 LSMGRRHKLCSPD---PGQANNSEGSDHDYLPLVRLQEAPGSFRLDAPFCAAVRISQERL 1087
L+ L SP PGQA S + LP+ L P P AA +
Sbjct: 484 LATPPLQALPSPPASFPGQAPFSPSAS---LPMSPLATPPPQ---APPVLAAPLLQVPPS 537
Query: 1088 CRASPFAVHRASLSPTSASLPWALLGP--GVGQGDSATASCSPSPSSGSEGPGQVDSGRG 1145
ASP +A P + ++ GP + S SPSS GP G
Sbjct: 538 PPASP--TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLA----G 591
Query: 1146 SDTEASEGAEGLGGTD 1161
+ A+ E L G D
Sbjct: 592 HSSSATSTPEELRGYD 607
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.0 bits (136), Expect = 1e-07
Identities = 122/508 (24%), Positives = 162/508 (31%), Gaps = 86/508 (16%)
Query: 569 SRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPT------GTSEPLGTGTVSAELSSP 622
S PP G PG + G + + AP A+SP PT T+ GT T A+ SP
Sbjct: 738 SLPPAGTPPGTKKVDG-ISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSP 796
Query: 623 WAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSA--SPEPGPGS 680
S Q+ P T G DT I S + ++ + + + P +
Sbjct: 797 LGVSVSPQTKR----PPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPAT 852
Query: 681 TGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAP-----TPAPFKV 735
T S P +G +P PL P +L E LP P TPAP +
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGV----TLPPKETPTPSVVNLPFPKEGPATPAPKQA 908
Query: 736 GALS-TEVLGRQHRAALAGRSLS---SPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLG 791
ALS T ++ RA A + + SP G P P G P P
Sbjct: 909 PALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAA 968
Query: 792 QGLDDSGNLLSPAPMDWDMLMEPPFLFTAVP--------PSGELAPPAVPPQAPRCHVVI 843
G +P+P PP P P G PPAV P +P+
Sbjct: 969 TPPSPKGGPATPSPKG---APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK----- 1020
Query: 844 RGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLAL 903
P G T + PPSP AA T + +
Sbjct: 1021 -----GSPAATPFPKGAST----PPAATPPSPKGSPAATPLPKGAPTTPAATLPSP---- 1067
Query: 904 RGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAE 963
+GG T + L+ T ++ PS P AT GA ++ P
Sbjct: 1068 KGGPATPS---------LKGAPTPPAATPPS----PKGGPATPSP--KGAPMPPAATPPS 1112
Query: 964 PPG---TPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGP 1020
P G TPP H P T KG G G P +P G
Sbjct: 1113 PKGGLATPP--HKGAPTTPAATPPSPKG-------GLATPPPKGAPTTPAATPPSPKGGL 1163
Query: 1021 RRPPPR----PPCRLSMGRRHKLCSPDP 1044
PPP+ P + L +P P
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSP 1191
Score = 53.1 bits (126), Expect = 2e-06
Identities = 130/578 (22%), Positives = 199/578 (34%), Gaps = 101/578 (17%)
Query: 583 GGSVFPSPEEAPS--AASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVT 640
GG PSP+ AP+ AA+P + G + P G + ++P + + L P
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG------LATPPH 1283
Query: 641 DPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAP 700
PNP+ V+T S P + +P + P SP+GS P
Sbjct: 1284 KGAPNPA------------------VVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS-P 1324
Query: 701 LEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPP 760
PP + A P+ + LPA TP+ G +T + + +PP
Sbjct: 1325 GTPPPKGAPTPPAVTPPSPKGTPTLPATTPS--SKGGPTTP----------SSKEGPTPP 1372
Query: 761 GRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFT- 819
G P + PSP+ G + G+ SPA + P T
Sbjct: 1373 AATPSHKGGPA-------MTPPSPKRGPAIPS---PKGDPTSPAVIPLSPKKAPATPVTR 1422
Query: 820 ---AVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPP 876
A P G+L PPAV P + + G G P +PP+P
Sbjct: 1423 EGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPK 1482
Query: 877 VREAAWDQALHRLTAASVVRDNEQLALRGGAETTADRGHARRCWLRALQTSKVSSAPSCF 936
+ T A + + + +RR + T P
Sbjct: 1483 QVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTP--- 1539
Query: 937 TCPVAVDATTREVLPGALQVCSSE--PAEP-PGTPPASHSHLDAAPLPTVVYSKGLQRGS 993
A A ++P A+ V S + PA P P PA+ S +A+ P V S +G+
Sbjct: 1540 ----ATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPS--TYKGA 1593
Query: 994 PAGAWDSDQNGNSKRALGDPA----TPTEGPRRPPPRPPCRLSMGRRHKLCSPDPGQANN 1049
P + K L PA +P E P P PP SP+ G A
Sbjct: 1594 P----------SPKELLIPPAVTSPSPKEAPTPPAVTPP------------SPEKGPATP 1631
Query: 1050 SEGSDHDYLPLV--RLQEAPGS-FRLDAPFCAAVRISQERL-CRASPFAVHRASLSPTSA 1105
+ P+ L+++P S + A V + + L + P A+ ++P
Sbjct: 1632 APKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPE 1691
Query: 1106 SLPWALL----GPGVGQGDSATASCSPSPS--SGSEGP 1137
S P GP + + + P PS +GS+GP
Sbjct: 1692 STPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGP 1729
Score = 52.8 bits (125), Expect = 2e-06
Identities = 111/488 (22%), Positives = 157/488 (32%), Gaps = 85/488 (17%)
Query: 571 PPGGQEPGWQSSGGSVFPSPEEAPS--AASPGTEPTGTSEPLGTGTVSAELSSPWAARDS 628
PP P GG PSP+ AP+ AA+P + G + P G + +P + + S
Sbjct: 965 PPAATPPS--PKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS 1022
Query: 629 EQST----DALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPG--STG 682
+T A T P P P+P + + + + L SP+ GP S
Sbjct: 1023 PAATPFPKGASTPPAATP-PSPKGSPAATPLPKGAPTTPAATL----PSPKGGPATPSLK 1077
Query: 683 SSESPGSQGPGSPEG--------SAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFK 734
+ +P + P SP+G AP+ P + P + PA TP K
Sbjct: 1078 GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 735 VGALSTEVLGRQHRAALAGRS----LSSPP--GRANQVPGRPRKPSLGAILDGPSPEPGQ 788
G + G A S L++PP G P P G P P
Sbjct: 1138 GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1197
Query: 789 QLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPS--GELAPPAVPPQAPRCHVVIRGL 846
G L +P+P P A PPS G LA P+ P AP
Sbjct: 1198 PAATPPSPKGGLATPSPKG------APTTPAATPPSPKGGLATPS-PKGAPTTPAAT--- 1247
Query: 847 CGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGG 906
P P +PP + A A +L+GG
Sbjct: 1248 ------------------PPSPKGGPATPPPKGAPTPPAA------------TPPSLKGG 1277
Query: 907 AETTADRGHARRCWLR--------ALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCS 958
T +G + A K + P T P + GA +
Sbjct: 1278 LATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPA 1337
Query: 959 SEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTE 1018
P P GTP + + PT SK + +P A S + G + P +P
Sbjct: 1338 VTPPSPKGTPTLPATTPSSKGGPTTPSSK--EGPTPPAATPSHKGGPAM----TPPSPKR 1391
Query: 1019 GPRRPPPR 1026
GP P P+
Sbjct: 1392 GPAIPSPK 1399
Score = 49.3 bits (116), Expect = 2e-05
Identities = 103/468 (22%), Positives = 162/468 (34%), Gaps = 85/468 (18%)
Query: 572 PGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSE-PLGTGTVSAELSSPWAARDSEQ 630
P P + PSP+ P+ SP +PT + PL A + A +
Sbjct: 1371 PPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGA--ATP 1428
Query: 631 STDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQ 690
S LT P P A +++P+ GP + S P
Sbjct: 1429 SKGDLTPPAVTPVSLKKAPA--------------------TSAPKGGPATPSSKGDPTLP 1468
Query: 691 GPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPT------PAPFKVGAL------ 738
P +P EPP+ + + + + A + P+ APT +P +V A
Sbjct: 1469 AVTPP---SPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRD 1525
Query: 739 ----STEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGL 794
+ +L ++ A LA + PP A VP + P++ + P+ ++
Sbjct: 1526 PIAPTATLLSKKTPATLAPKEALIPP--AMTVPSPKKTPAIPTPKEAPATPSSKEASSPP 1583
Query: 795 DDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCW 854
+ + AP ++L+ P T+ P PPAV P +P
Sbjct: 1584 AVTPSTYKGAPSPKELLIPP--AVTSPSPKEAPTPPAVTPPSP----------------- 1624
Query: 855 EVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETTADRG 914
E G P P SPPV ++ + + ASV G A +G
Sbjct: 1625 EKGPAT-----PAPKGTPTSPPVTPSSLKDS--PTSPASVT------CKMGATVPQASKG 1671
Query: 915 HARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPASHSH 974
+ AL+ V+ AP + P+ + A TR+ Q S PP P S +
Sbjct: 1672 LPAKKGPTALKEVLVAPAPE--STPI-ITAPTRK----GPQTKKSSATSPPICPDPSAKN 1724
Query: 975 LDAAPLPTVVYSKGL--QRGSPAGAWDSDQNGNSKRALGDPATPTEGP 1020
PL TV + L Q+ S A D + + K L P + P
Sbjct: 1725 GSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTP 1772
Score = 40.8 bits (94), Expect = 0.008
Identities = 63/278 (22%), Positives = 106/278 (38%), Gaps = 33/278 (11%)
Query: 588 PSPEEAPS--AASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPN 645
PSP+EAP+ A +P + G + P GT ++ +P + +DS S ++T + P
Sbjct: 1608 PSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ 1667
Query: 646 PSD--------TAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGS-------SESPGSQ 690
S TA+ + + + P+ S S S GS+
Sbjct: 1668 ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSK 1727
Query: 691 GPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPL-PAPTPAPFKVGALSTEVLGRQHRA 749
GP S APL P + ++ + + S PL P + A + A + E + + +
Sbjct: 1728 GPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPES 1787
Query: 750 ALAGRSLSSP---PGRANQVPGRPRK-----PSLGAILDGPSP--EPGQQLGQGLDDSGN 799
A + S P P + VP P K S G +L+ PS P + D+
Sbjct: 1788 ASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADE-----DELLP 1842
Query: 800 LLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAP 837
L+ P P+ + + + P S + P + P
Sbjct: 1843 LIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQP 1880
Score = 34.3 bits (77), Expect = 0.76
Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 159 LAPPGPPGPPRPPGLCDDSPTSCFGVGSLQEEGLAWEELAAPRDVFSGPARCPAPYTFSF 218
LA P P G P P SP G+ + +G A P GPA P P
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKG--GLATPSPKGAPTTPAATPPSPKGGPA-TPPPKGAPT 1265
Query: 219 EMLVTGPCLLAGLESPSH 236
T P L GL +P H
Sbjct: 1266 PPAATPPSLKGGLATPPH 1283
Score = 30.8 bits (68), Expect = 8.4
Identities = 35/122 (28%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 119 LPTGIIAAAGTMTVTLHSSRELPSRPDGVLHVALPTVLTPLAP------PGPPGPPRPPG 172
LP G A T TL S + P+ P + P TP +P P P G P PP
Sbjct: 1052 LPKG---APTTPAATLPSPKGGPATPS-LKGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Query: 173 LCDDSPTSCFGVGSLQEEGLAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLE 232
SP G+ + +G A P G A P P T P GL
Sbjct: 1108 ATPPSPKG--GLATPPHKGAPTTPAATPPSPKGGLA-TPPPKGAPTTPAATPPSPKGGLA 1164
Query: 233 SP 234
+P
Sbjct: 1165 TP 1166
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 55.8 bits (133), Expect = 2e-07
Identities = 95/359 (26%), Positives = 134/359 (37%), Gaps = 102/359 (28%)
Query: 681 TGSSESPGSQGPGSPEGSAPLE---PPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGA 737
TG S +P + G GSP+ A L+ P +SL WG+PAG+ P P P P P G
Sbjct: 784 TGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWGDPAGT---PSPHPDP-PSSRGP 839
Query: 738 LSTEVLGR-QHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDD 796
L E + R + G ++++P R+ + PR P+ Q+L + D
Sbjct: 840 LPLEPICRGPDGRFVMGPTVAAPQERSGREQAEPRTPA-------------QRLARSFDC 886
Query: 797 SGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEV 856
S + S AP P + P +APP P +P L G P+ +
Sbjct: 887 SSSSPSGAPQ--------PLCIEDISP---VAPPPAAPPSP--------LPGPGPLLQYL 927
Query: 857 G------VGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETT 910
+ ++ W P + P +PP
Sbjct: 928 SLPFFREMNVDGDWPPLEEPSPAAPP---------------------------------- 953
Query: 911 ADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPA 970
D RRC TS +P T PV + RE LPGA+ V + AEPP T A
Sbjct: 954 -DYMDTRRC-----PTSSFLRSPE--TPPV----SPRESLPGAV-VGAGATAEPPYTALA 1000
Query: 971 SHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNG-NSKRALGDPAT-PTEGPRRPPPRP 1027
+ L LP GL +P G+ S +G S L P+T P+ G P P
Sbjct: 1001 DWT-LRERLLP------GLLPAAPRGSLTSQSSGRGSASFLRPPSTAPSAGGSYLSPAP 1052
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 55.8 bits (133), Expect = 2e-07
Identities = 95/359 (26%), Positives = 134/359 (37%), Gaps = 102/359 (28%)
Query: 681 TGSSESPGSQGPGSPEGSAPLE---PPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGA 737
TG S +P + G GSP+ A L+ P +SL WG+PAG+ P P P P P G
Sbjct: 768 TGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWGDPAGT---PSPHPDP-PSSRGP 823
Query: 738 LSTEVLGR-QHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDD 796
L E + R + G ++++P R+ + PR P+ Q+L + D
Sbjct: 824 LPLEPICRGPDGRFVMGPTVAAPQERSGREQAEPRTPA-------------QRLARSFDC 870
Query: 797 SGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEV 856
S + S AP P + P +APP P +P L G P+ +
Sbjct: 871 SSSSPSGAPQ--------PLCIEDISP---VAPPPAAPPSP--------LPGPGPLLQYL 911
Query: 857 G------VGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETT 910
+ ++ W P + P +PP
Sbjct: 912 SLPFFREMNVDGDWPPLEEPSPAAPP---------------------------------- 937
Query: 911 ADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPA 970
D RRC TS +P T PV + RE LPGA+ V + AEPP T A
Sbjct: 938 -DYMDTRRC-----PTSSFLRSPE--TPPV----SPRESLPGAV-VGAGATAEPPYTALA 984
Query: 971 SHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNG-NSKRALGDPAT-PTEGPRRPPPRP 1027
+ L LP GL +P G+ S +G S L P+T P+ G P P
Sbjct: 985 DWT-LRERLLP------GLLPAAPRGSLTSQSSGRGSASFLRPPSTAPSAGGSYLSPAP 1036
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 53.9 bits (128), Expect = 9e-07
Identities = 124/522 (23%), Positives = 164/522 (31%), Gaps = 98/522 (18%)
Query: 676 PGPG----STGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPA 731
PGPG S+GSS G GPG G + S ++ + PLP P P+
Sbjct: 1399 PGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPS 1458
Query: 732 PFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPR-KPSLGAILDGPSPEP---- 786
V L + A LSS G G PR KP L GPSP P
Sbjct: 1459 SSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRY 1518
Query: 787 -GQQLGQGLDDSGNLLSPAPM-------DWDMLMEPPFLFTAVPPSGELAPPAVPPQAPR 838
Q++ GL + P PM D PF PP PP P
Sbjct: 1519 EPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF-----PPKRRERPPRKPE---- 1569
Query: 839 CHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVVRDN 898
L E+ + G GS+P P QA R T + +
Sbjct: 1570 -------LLQEESLPPPHSSGFL-------GSKPEGP------GPQAESRDTGTEALTPH 1609
Query: 899 EQLALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCS 958
L + R + W+ L + + VD L G QV S
Sbjct: 1610 IWNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVD------LSGDSQV-S 1662
Query: 959 SEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTE 1018
S P +P KG G P S N+ G P +E
Sbjct: 1663 SGPCSQRSSPDGG--------------LKGAAEGPPKRPGGSSPL-NAVPCEGPPG--SE 1705
Query: 1019 GPRRPPPRP--PCRLSMGRRHKLCSPDPGQANNSEGSDHDYLP-LVRLQEAPGSFRLDAP 1075
PRRPPP P R + R L P P S+ +D P +R PG
Sbjct: 1706 PPRRPPPAPHDGDRKELPREQPL-PPGPIGTERSQRTDRGTEPGPIRPSHRPGP---PVQ 1761
Query: 1076 FCAAVRISQERLCRASPFAVHRASLSPTSASLP----WALLGPGVGQGDSATAS-----C 1126
F + + S RL + + + ++P W LL + + + C
Sbjct: 1762 FGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGHC 1821
Query: 1127 SPSPSS-----------GSEGPGQVD-SGRGSDTEASEGAEG 1156
P PSS GS GP SG D++ + G
Sbjct: 1822 VPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGG 1863
Score = 45.4 bits (106), Expect = 3e-04
Identities = 60/239 (25%), Positives = 88/239 (36%), Gaps = 55/239 (23%)
Query: 819 TAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGP--------GDGS 870
T+ PP E PPA P P H RG G WGP G
Sbjct: 395 TSRPPETEPGPPAPKPPLPPPH---RGPAGN--------------WGPPGDYPDRGGPPC 437
Query: 871 QPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETTADRGHARRC----WLRALQ- 925
+PP+P + AW Q R ++S + + A R E RR L+ L
Sbjct: 438 KPPAPEDEDEAWRQ--RRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDE 495
Query: 926 ---------TSKVSSAPSCFTCPVAVDATTREV------LPGALQVCSSEPAEPPGTPPA 970
++ ++ P+ + P A +E+ P + +EP EP PPA
Sbjct: 496 KFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPA 555
Query: 971 SHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPT-EGPRRPPPRPP 1028
+ P P V + L G G+ S +G+ + + +P P+ EGP P PP
Sbjct: 556 -----QSTPTPGVAAAPTLVSG--GGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPP 607
Score = 37.4 bits (85), Expect = 0.090
Identities = 59/249 (23%), Positives = 85/249 (34%), Gaps = 38/249 (15%)
Query: 568 RSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPL-----GTGTVSAELSSP 622
+ RPP P G V P E + +EP P GT V +L+
Sbjct: 736 QGRPPLDFYPPGVHPSGLV---PRERSDSGGSSSEPFDRHAPAMLRERGTPPVDPKLA-- 790
Query: 623 WAARDSEQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTG 682
W D +T A P+T P + Q++ ++ + + P P P
Sbjct: 791 WVG-DVFTATPAEPRPLTSP------------LRQAADEDDKGMRSETPPVPPPPPYLAS 837
Query: 683 SSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEV 742
P + PG P PLE P G R L W P + P P + ++
Sbjct: 838 YPGFPENGAPGPPISRFPLEEP---GPRPLPW-PPGSDEVAKIQTPPPKKEPPKEETAQL 893
Query: 743 LGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPE------PGQQLGQGLDD 796
G + AGR + G Q P PR+ S GP P P ++ G
Sbjct: 894 TGPE-----AGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 948
Query: 797 SGNLLSPAP 805
+G + P P
Sbjct: 949 AGPIKKPPP 957
Score = 35.0 bits (79), Expect = 0.45
Identities = 55/235 (23%), Positives = 77/235 (32%), Gaps = 59/235 (25%)
Query: 670 CSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPT 729
CS P G G++E P P P GS+PL +G P GS P P
Sbjct: 1666 CSQRSSPDGGLKGAAEGP----PKRPGGSSPLNAVPCEG--------PPGSEPPRRPPPA 1713
Query: 730 P-----------APFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRP------RK 772
P P G + TE R+ R P R + PG P K
Sbjct: 1714 PHDGDRKELPREQPLPPGPIGTE------RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDK 1767
Query: 773 PSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAV 832
S ++ G S + ++L + ++ P DW EL P A
Sbjct: 1768 DSDLRLVVGDSLKAEKELTASVTEA----IPVSRDW-----------------ELLPSAA 1806
Query: 833 PPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALH 887
P+ + G C +P + E +G + P S + A D LH
Sbjct: 1807 ASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYG---SAGPSSSQISGGAMDSQLH 1858
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 53.1 bits (126), Expect = 2e-06
Identities = 69/280 (24%), Positives = 86/280 (30%), Gaps = 61/280 (21%)
Query: 569 SRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDS 628
SR P G+ G GG+ P P G P G ++P G P +
Sbjct: 173 SRSPPGKPQGPPPQGGNQ-PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 231
Query: 629 EQSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPG 688
QS A + P GP P P+ P G + P
Sbjct: 232 SQS--ARSPPGKPQGPPPQG----------------------GNQPQGPPPPPGKPQGPP 267
Query: 689 SQGPGSPEG----SAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLG 744
QG P+G P PP Q G +S + P G P P P
Sbjct: 268 PQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP------------ 315
Query: 745 RQHRAALAGRSLSSPP--GRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLS 802
Q G+ PP G Q P P KP GP P+ G + G
Sbjct: 316 -QGPPPPPGKPQGPPPQGGNKPQGPPPPGKP------QGPPPQGGSKSRSARSPPGKPQG 368
Query: 803 PAPMDWDMLMEPPFLFTAVPPSG-----ELAPPAVPPQAP 837
P + + PP PP+G APPA PQ P
Sbjct: 369 PPQQEGNNPQGPP------PPAGGNPQQPQAPPAGQPQGP 402
Score = 41.6 bits (96), Expect = 0.005
Identities = 85/384 (22%), Positives = 119/384 (30%), Gaps = 65/384 (16%)
Query: 674 PEPGPGSTGSSESPGSQGPGSPEGSAPL---EPPSQQGCRSLAWGEPAGSRSCPLP---- 726
P+ P G + P QG P+G P + P QG +S + P G P P
Sbjct: 68 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN 127
Query: 727 ---APTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQV------PGRPR--KPSL 775
P P P K + + G+ PP N+ PG+P+ P
Sbjct: 128 QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQG 187
Query: 776 GAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQ 835
G GP P PG+ G P P + PP P G+ P PPQ
Sbjct: 188 GNQPQGPPPPPGKPQG-----------PPPQGGNKPQGPP-------PPGK--PQGPPPQ 227
Query: 836 APRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVV 895
R G+ G G PP P + Q ++
Sbjct: 228 GDNKSQSARSPPGKPQ-------GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 280
Query: 896 RDNEQLALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQ 955
+ +GG+++ + R + Q P P G
Sbjct: 281 GKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPP----PPPGKPQGPPPQGGNKP 336
Query: 956 VCSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQN------GNSKRA 1009
P +P G PP S +A P G +G P ++ Q GN ++
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSPP-----GKPQGPPQQEGNNPQGPPPPAGGNPQQP 391
Query: 1010 LGDPATPTEGPRRP-----PPRPP 1028
PA +GP RP P RPP
Sbjct: 392 QAPPAGQPQGPPRPPQGGRPSRPP 415
Score = 38.1 bits (87), Expect = 0.053
Identities = 45/174 (25%), Positives = 56/174 (32%), Gaps = 20/174 (11%)
Query: 671 SASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLP---- 726
+ +P+ P G+ PG P+G PP Q G + P G P P
Sbjct: 33 AGNPQGAPPQGGNKPQGPPSPPGKPQG-----PPPQGGNQPQGPPPPPGKPQGPPPQGGN 87
Query: 727 ---APTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPS 783
P P G R R+ G+ PP NQ G P P GP
Sbjct: 88 KPQGPPPPGKPQGPPPQGDKSRSPRSP-PGKPQGPPPQGGNQPQGPPPPPGKP---QGPP 143
Query: 784 PEPGQQLGQGLDDSGNLLSPAPMDWD---MLMEPPFLFTAVPPSGELAPPAVPP 834
P+ G + QG G P P + PP PP G P PP
Sbjct: 144 PQGGNK-PQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPP 196
Score = 31.6 bits (70), Expect = 4.9
Identities = 37/142 (26%), Positives = 52/142 (36%), Gaps = 9/142 (6%)
Query: 738 LSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDS 797
L+ +V + + +AG +PP N+ G P P GP P+ G Q
Sbjct: 19 LNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKP---QGPPPQGGNQPQGPPPPP 75
Query: 798 GNLLSPAPMDWDMLM--EPPFLFTAVPPSGELA-PPAVPPQAPRCHVVIRGLCGEQPMCW 854
G P P + PP PP G+ + P PP P+ +G G QP
Sbjct: 76 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ-GPPPQG--GNQPQGP 132
Query: 855 EVGVGLETLWGPGDGSQPPSPP 876
G P G++P PP
Sbjct: 133 PPPPGKPQGPPPQGGNKPQGPP 154
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 52.4 bits (124), Expect = 3e-06
Identities = 160/632 (25%), Positives = 215/632 (34%), Gaps = 95/632 (15%)
Query: 589 SPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSD 648
S + S SP + T + + A L+SP + + L P++ P P
Sbjct: 411 SLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQ 470
Query: 649 TAIWRRIFQSSYIREQYVLTHCSA----SPEPG-------PGSTGSSESPGS-QGPGSPE 696
T++ + S + L S+ SP+ P T SS +P S Q P +
Sbjct: 471 TSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASL 530
Query: 697 GSAPLE-------PPSQQGCRSLAWGE---PAGSRSCPLPAP-----TPAPFKVGALSTE 741
+ PLE PP Q L P CPL AP TP P +++T
Sbjct: 531 TTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATP 590
Query: 742 VLGRQHRAALAG---RSLSSPP--GRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDD 796
Q ALA + L SPP A P P +L + PSP L
Sbjct: 591 P--PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSP---- 644
Query: 797 SGNLLSPAPMDWDML----MEPPFLFTAVPP-SGELAPPAVPPQAPRCHVVIRGLCGEQP 851
L +P+P + L ++ PF PP +PPA PP +P P
Sbjct: 645 ---LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA---------TPP 692
Query: 852 MCWEVGVGLETLWGPGDGSQPPSPPVREAAWD--QALHRLTAASVVRDNEQLALRGGAET 909
+ L P S P SPP+ +A QA L A + A + +
Sbjct: 693 SQAPPSLAAPPLQVPP--SPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750
Query: 910 TADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGAL-----QVCSSEPAEP 964
L A +V +P + P++ A P AL Q S PA
Sbjct: 751 ATPPPRVPP--LLAAPPLQVPPSPPA-SLPMSPLAKPPPQAPPALATPPLQALPSPPASF 807
Query: 965 PGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPT-EGPRRP 1023
PG P S S A LP + + P A Q S PA+PT + PRRP
Sbjct: 808 PGQAPFSPS----ASLPMSPLATPPPQAPPVLAAPLLQVPPSP-----PASPTLQAPRRP 858
Query: 1024 PPRPPCRLSMGRRHKLC-----SPDPGQANNS--EGSD---HDYLPLVRLQEAPGSFRLD 1073
P P G R L P P ++ +S G D H +E G
Sbjct: 859 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGP 918
Query: 1074 APFCAAVRISQERLCRASPFAVHRASLSPTS------ASLPWA-LLGPGVGQGDSATASC 1126
AA L P A R P + A LPW GPG G T
Sbjct: 919 EGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADG-LCTIYE 977
Query: 1127 SPSPSSGSEGPGQVDSGRGSDTEASEGAEGLG 1158
+ P S + PG +D G T + A G G
Sbjct: 978 TEGPESATPAPGALDPGPSPGTSGGKAAAGAG 1009
Score = 50.1 bits (118), Expect = 1e-05
Identities = 145/614 (23%), Positives = 186/614 (30%), Gaps = 84/614 (13%)
Query: 588 PSPEEAPSAAS----PGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPG 643
PSP PS + P T P+ + T + A S Q +LT P
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIP--PIQVPHSLTSPSLQAP 403
Query: 644 PNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEP 703
P+P + + Q + + SP S S P S P SP APL
Sbjct: 404 PSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSL 463
Query: 704 PSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRA 763
P+ P + P +P +P + L H SL PP
Sbjct: 464 PA---------SPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLET 514
Query: 764 NQVPGRPRKPSLGAILDGP--------SPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPP 815
P + A L P +P P Q L P P L PP
Sbjct: 515 QSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCP-LQAPP 573
Query: 816 FLFTAVPPSGELAPPAVPPQAP--RCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPP 873
T PP + PPQAP ++GL P P
Sbjct: 574 SPLTTPPPETPSSIATPPPQAPPALASPPLQGL-------------------PSPPLSPL 614
Query: 874 SPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETTADRGHARRCWLRALQTSKVSSAP 933
+ P +A AL L A + L+ A A
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 674
Query: 934 SCF----TCPVAVDATTREVLPGA-----LQVCSSEPAEPPGTPPASHSHLDAAPLPTVV 984
+ F + PV+ AT P + LQV S PA PP +P A+ AP P
Sbjct: 675 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP--PQAPPPLAA 732
Query: 985 YSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGPRRPPPRPPCRLSMGRRHKLCSPDP 1044
+ PA S R P P + PP PP L M L P P
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPPRV---PPLLAAPPLQVPPSPPASLPMS---PLAKPPP 786
Query: 1045 GQANNSEGSDHDYLPLVRLQEAPGSFRLDAPFCAAVRISQERLCRASPFA--VHRASL-- 1100
QA + + PL L P SF APF + + L P A V A L
Sbjct: 787 -QAPPALATP----PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 841
Query: 1101 ----SPTSASLPWALLGPGVG-----QGDSATASCSPS-PSSGSEGPGQVDSG---RGSD 1147
P S +L P G G T + +P P S P SG G
Sbjct: 842 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHS 901
Query: 1148 TEASEGAEGLGGTD 1161
+ A+ E L G D
Sbjct: 902 SSATSTPEELRGYD 915
Score = 45.8 bits (107), Expect = 3e-04
Identities = 128/464 (27%), Positives = 159/464 (34%), Gaps = 96/464 (20%)
Query: 571 PPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWA--ARDS 628
PP P S PSP +P A P P + P S S P + A S
Sbjct: 590 PPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPS 649
Query: 629 EQSTDALT----DPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSS 684
Q+ +AL P P+P A + ASP P +T S
Sbjct: 650 PQAPNALAVHLLQAPFSPPPSPPVQAPFSP----------------PASPPVSPSATPPS 693
Query: 685 ESPGS------QGPGSPEGSAPLEP---PSQQGCRSLA----WGEPAGSRSCPL-PAPTP 730
++P S Q P SP S P+ P P Q LA P+ S P+ P+ TP
Sbjct: 694 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATP 753
Query: 731 APFKVGALSTEVL--GRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQ 788
P L+ L A+L L+ PP Q P P L A+ PSP P
Sbjct: 754 PPRVPPLLAAPPLQVPPSPPASLPMSPLAKPP---PQAPPALATPPLQAL---PSP-PAS 806
Query: 789 QLGQGLDDSGNLLSPAPMDWDMLMEPPFL---FTAVPPSGELAPPAVPP-QAPRCHVVIR 844
GQ L +P+ PP L VPPS PPA P QAPR
Sbjct: 807 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS----PPASPTLQAPRRPPT-- 860
Query: 845 GLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVRE-----AAWDQALHRLTAASVVRDNE 899
P G L PG PP PP R + D A H +A S +
Sbjct: 861 ----PGPDTSVSGPRLTLALAPG----PPPPPSRSPSSTLSGPDLAGHSSSATSTPEE-- 910
Query: 900 QLALRG---GAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQV 956
LRG G E A L A + S P+ P+A LP
Sbjct: 911 ---LRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA---PPLAFRGAPGAPLPW---- 960
Query: 957 CSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPA-GAWD 999
PP T P S A L T+ ++G + +PA GA D
Sbjct: 961 -------PPATGPGS-----ADGLCTIYETEGPESATPAPGALD 992
Score = 40.0 bits (92), Expect = 0.014
Identities = 106/430 (24%), Positives = 140/430 (32%), Gaps = 86/430 (20%)
Query: 569 SRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTG--TVSAELS------ 620
SRPP + P P +P AS T P PLG +SAE +
Sbjct: 92 SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP----GPLGQKGLRISAEETVARGKA 147
Query: 621 ---------SPWAARDSEQSTDALTDPV---------TDPG-PNPSDTAIWRRIFQSSYI 661
S A RD+ T P T+ G P P+ +A R +
Sbjct: 148 TEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRK 207
Query: 662 REQYVLTHCSASPEPG----PGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEP 717
H + P P P + G + P S+ S + PL P++ G
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS--SATPLSSPARSG------PSA 259
Query: 718 AGSRSCPLPAPTPAPFKVGAL-STEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLG 776
G+ P P P + AL +V + AA A LSS P G +P
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPV-- 317
Query: 777 AILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPP-Q 835
P L L S L +P P+ PP L T PS PPA PP Q
Sbjct: 318 ----PPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTL--PS----PPATPPSQ 367
Query: 836 APRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVREAAWDQALHRLTAASVV 895
AP PM + L+T+ PP+ Q H LT+ S+
Sbjct: 368 APPSMTT-------PPM--QAPPSLQTI-----------PPI------QVPHSLTSPSLQ 401
Query: 896 RDNEQLALRGGAETTADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQ 955
LAL + T G + T + T P +T + P LQ
Sbjct: 402 APPSPLAL-SSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPP--LQ 458
Query: 956 VCSSEPAEPP 965
S PA PP
Sbjct: 459 APLSLPASPP 468
Score = 32.0 bits (71), Expect = 3.8
Identities = 60/240 (25%), Positives = 78/240 (32%), Gaps = 33/240 (13%)
Query: 815 PFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEV-GVGLETL------WGP- 866
P L T PP PP V P A R + G G +P+ G+G T+ GP
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRV-LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPT 80
Query: 867 --------GDGSQPP-------SPPVREAAWDQALHRLTAASVVRDNE--QLALRGGAET 909
S+PP +PP + + A+ R Q LR AE
Sbjct: 81 RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140
Query: 910 TADRGHARRCWLRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEP----P 965
T RG A R+ ++ S T A R +V PA P
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 966 GTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALGDPATPTEGPRRPPP 1025
T S A+ T S +R AG + R+L ATP P R P
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAG---GGLQRPASRSLSSSATPLSSPARSGP 257
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 50.8 bits (120), Expect = 8e-06
Identities = 63/227 (27%), Positives = 80/227 (35%), Gaps = 41/227 (18%)
Query: 671 SASPEPGPGSTGSSESPGSQGPGSP----EGSAPLEPPSQQGCRSLAWGE---------- 716
S +P PG + SP P +P + + PLEP R +A
Sbjct: 1069 SRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1128
Query: 717 PAGSRSCPLPAPTP----APFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRK 772
P+G+RS PAPT AP G + +GR + AG + PG A RP
Sbjct: 1129 PSGARS---PAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLA---GPGPAGYSTARPTI 1182
Query: 773 PSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAV 832
P ++ P G+ +S + S L EP A PP L PPA
Sbjct: 1183 PPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQ 1242
Query: 833 PPQAPRCHVVI-RGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVR 878
Q P V G QP LET PP PP R
Sbjct: 1243 RLQEPLVPVAAPMPQSGPQP-------NLET---------PPQPPPR 1273
Score = 36.6 bits (83), Expect = 0.15
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 944 ATTREVLPGALQVCSSE-----PAEPPGTPPASHSHLDAAPLPTVVY--SKGLQRG-SPA 995
A E+LP LQ SS P+ P T P + P+P++ S+ R P
Sbjct: 1020 AEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPP 1079
Query: 996 GAWDSDQNGNSKRALG--DPATPTEGPRRPPPRP 1027
A S + L DPA P E R PPPRP
Sbjct: 1080 SAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRP 1113
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 50.4 bits (119), Expect = 1e-05
Identities = 97/388 (25%), Positives = 137/388 (35%), Gaps = 69/388 (17%)
Query: 481 GPTCHQLLQGLSALSRGQAYFLR-----PGQRLQPMLVQALRKALEPALSDISVDWFVPD 535
GP+ Q+LQGL A L P + P + +A + +P +S+ +P
Sbjct: 48 GPSDSQILQGLCASEGPSTSVLPTSAEGPSTFVPPTISEASSASGQPTISEGPGTSVLPT 107
Query: 536 TVEALLTPREIPALYPGDQLLGYCSLFRVDGFR-SRPPGGQEPGWQSSGGSVFPSPEEAP 594
E L T P + G L +L +G SRPP E SV P+ E P
Sbjct: 108 PSEGLSTSGP-PTISKG--LCTSVTLAASEGRNTSRPPTSSE----EPSTSVPPTASEVP 160
Query: 595 SAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWRR 654
S + P T GTS + +S D ST L P PG + A
Sbjct: 161 STSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSVPLAA---- 216
Query: 655 IFQSSYIREQYVLTHCSASPEPGPGST---------------GSSESPGSQGPGSP-EGS 698
+ + T A+P+ GP ++ E P + P +P EG
Sbjct: 217 --------TEGLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVPATPGEGP 268
Query: 699 APLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSS 758
+ P+ +S++ G S PT LST V A G S S
Sbjct: 269 STSVLPAASDGQSISLVPTRGKGSSTSVPPTATE----GLSTSV----QPTAGEGSSTSV 320
Query: 759 PP----GRANQVPGRPRKPSLGAILDGPSPEPGQQL----GQGLDDSGNLLSPAPMDWDM 810
PP G + VP + ++ P P + G+GL S + P D
Sbjct: 321 PPTPGGGLSTSVPPTATEELSTSVPPTPGEGPSTSVLPIPGEGLSTS---VPPTASDGS- 376
Query: 811 LMEPPFLFTAVPPS-GELAPPAVPPQAP 837
T+VPP+ GE A V P AP
Sbjct: 377 -------DTSVPPTPGEGASTLVQPTAP 397
Score = 30.8 bits (68), Expect = 8.4
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 585 SVFPSPEEAPSAASPGTEPTG--TSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDP 642
SV P P E S + P T G TS P G ++ L P A S + +P
Sbjct: 355 SVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLVQPTAPDGPGSSV------LPNP 408
Query: 643 GPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLE 702
G PS +F SS ++ + CS P P T +S S+GP EG P+E
Sbjct: 409 GEGPST------LFSSSASVDRNP-SKCSLVL-PSPRVTKASVDSDSEGPKGAEG--PIE 458
Query: 703 PPSQQGCRS 711
+ C S
Sbjct: 459 FEVLRDCES 467
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 50.4 bits (119), Expect = 1e-05
Identities = 82/294 (27%), Positives = 104/294 (35%), Gaps = 43/294 (14%)
Query: 569 SRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGT-----GTVSAELSSPW 623
+RPP P +SG S +P AP+ +PG+ PTG+ +P+G+ + P
Sbjct: 501 TRPPATMVP--PTSGTS---TPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKSSPRKPV 555
Query: 624 AARDSEQSTDA-LTDPVTDPG---PNPSDTAIWRRI-----FQSSYIR---EQYVLTHCS 671
R + + D L+D T P P PS + F SS R Y + H +
Sbjct: 556 PLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYSIFHLA 615
Query: 672 ASP-------EPGP-GSTGSSESPGSQG-PGSPEGSAPLEPPSQQGCRSLAWGEPAGSRS 722
S PGP G G PG G PG P P PP G L G P
Sbjct: 616 GSTPFPLLMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLP-GPPGAKGQ 674
Query: 723 CPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQ--VPGRPRKPSLGAILD 780
P +P GA G L+G PPGR PG P
Sbjct: 675 KGDPGLSPGKAHDGA-----KGDMGLPGLSGN--PGPPGRKGHKGYPGPAGHPGEQG-QP 726
Query: 781 GPSPEPGQQLGQGLDD-SGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVP 833
GP PG + G G + P P + P LF GE P VP
Sbjct: 727 GPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVP 780
Score = 40.4 bits (93), Expect = 0.011
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 22/171 (12%)
Query: 585 SVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGP 644
S P+ + APS+ + PT P + V A +S P A + +++ P P
Sbjct: 384 SPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRP-AEKPIQRNPGMPRPPPPSTRP 442
Query: 645 NPSDTAIWRRIFQSSYIREQYVLTHCS-------------------ASPEPGPGSTGSSE 685
P T+ ++ + E + +H S +SP P PGST S+
Sbjct: 443 LPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTR 502
Query: 686 SPGSQGPGSPEGSAPLEPPSQQGCRSLAWG--EPAGSRSCPLPAPTPAPFK 734
P + P + S P P+ S G +P GS + P +P K
Sbjct: 503 PPATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKSSPRK 553
Score = 36.6 bits (83), Expect = 0.15
Identities = 50/165 (30%), Positives = 61/165 (36%), Gaps = 28/165 (16%)
Query: 672 ASPEPGP-GSTGSSESPGSQGPGSPEG-SAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPT 729
A +PGP G G S G GP PEG + PP G + G+P G+R P P
Sbjct: 884 ARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMK-GKP-GARGLPGPR-- 939
Query: 730 PAPFKVGALSTEVLGRQHRAALAGR-SLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQ 788
G L E G + G L PGR PGRP LDG EPG
Sbjct: 940 ------GQLGPE--GDEGPMGPPGAPGLEGQPGRKG-FPGRPG-------LDGVKGEPGD 983
Query: 789 QLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVP 833
G + M + L+ P + G + PP VP
Sbjct: 984 P-----GRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVP 1023
Score = 36.2 bits (82), Expect = 0.20
Identities = 52/206 (25%), Positives = 69/206 (33%), Gaps = 46/206 (22%)
Query: 674 PEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPF 733
P PG+ G PG QGP P G PP + G + G P LP
Sbjct: 1118 PSGPPGTKGLPGEPGPQGPQGPIG-----PPGEMGPK----GPPGAVGEPGLPGEAGMKG 1168
Query: 734 KVGALSTE----VLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQ 789
+G L T ++G++ L G S P G P GP E G++
Sbjct: 1169 DLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDP----------GPDGEHGEK 1218
Query: 790 LGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGE 849
+GL M D PP + P G+ Q + +G G
Sbjct: 1219 GQEGL-----------MGEDGPPGPPGVTGVRGPEGKSG-----KQGEKGRTGAKGAKGY 1262
Query: 850 QPMCWEVGVGLETLWGPGDGSQPPSP 875
Q E+GV PGD P +P
Sbjct: 1263 QGQLGEMGV-------PGDPGPPGTP 1281
Score = 35.0 bits (79), Expect = 0.45
Identities = 59/227 (25%), Positives = 82/227 (36%), Gaps = 23/227 (10%)
Query: 944 ATTREVLPGALQVCSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQN 1003
A T P SS PA PG+ ++ P PT S R +PA
Sbjct: 474 ARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVP-PTSGTST--PRTAPAVPTPGSAP 530
Query: 1004 GNSKRALGDPATPTEGPRRPPPRP-PCRLSMGRRHKLCS-----PDPGQANNSEGSDHDY 1057
SK+ +G A+ GP+ P +P P R R S P P Q S+ +
Sbjct: 531 TGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRPSPRQPQPSQQT---- 586
Query: 1058 LPLVRLQEAPGSFRLDAPFCAAVRISQERLCRASPFAVHRASLSPT-SASLPW--ALLG- 1113
P + L AP F +P + S L ++PF + P LP L G
Sbjct: 587 TPALVL--APAQFLSSSPRPTSSGYSIFHLAGSTPFPLLMGPPGPKGDCGLPGPPGLPGL 644
Query: 1114 PGVGQGDSATASCSPSPSSGSEGPGQVDSGRG----SDTEASEGAEG 1156
PG+ P + G GP +G S +A +GA+G
Sbjct: 645 PGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSPGKAHDGAKG 691
Score = 35.0 bits (79), Expect = 0.45
Identities = 54/202 (26%), Positives = 69/202 (34%), Gaps = 50/202 (24%)
Query: 678 PGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGA 737
PG G +PG GP P GS PP +G A R P PA
Sbjct: 1032 PGMPGGMGTPGEPGPQGPPGSR--GPPGMRG---------AKGRRGPRGPDGPA------ 1074
Query: 738 LSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAI-----------LDGPSPEP 786
G Q R L PPG + PGRP + + + GPS P
Sbjct: 1075 ------GEQ-----GSRGLKGPPGPQGR-PGRPGQQGVAGERGHLGSRGFPGIPGPSGPP 1122
Query: 787 GQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQA-PRCHVVIRG 845
G + G P P + PP P G + P +P +A + + G
Sbjct: 1123 GTKGLPG--------EPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLG 1174
Query: 846 LCGEQPMCWEVG-VGLETLWGP 866
GEQ + + G GLE GP
Sbjct: 1175 TPGEQGLIGQRGEPGLEGDSGP 1196
Score = 31.6 bits (70), Expect = 4.9
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 674 PEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPA--GSRSCP-LPAPTP 730
P G G S G +GP P+G P QQG GE GSR P +P P+
Sbjct: 1067 PRGPDGPAGEQGSRGLKGPPGPQGRP--GRPGQQGVA----GERGHLGSRGFPGIPGPSG 1120
Query: 731 APFKVGALSTE-VLGRQHRAALAGR-SLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQ 788
P G G Q G PPG + PG P + + L GP PG+
Sbjct: 1121 PPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGE-PGLPGEAGMKGDL-GPLGTPGE 1178
Query: 789 Q--LGQ----GLDDSGNLLSPAPMDWD 809
Q +GQ GL+ + P + D
Sbjct: 1179 QGLIGQRGEPGLEGDSGPMGPDGLKGD 1205
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 49.7 bits (117), Expect = 2e-05
Identities = 65/215 (30%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 671 SASPEPGPGS--TGSSESPGSQ---GPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPL 725
SASP P T SS S Q G +P G +PL P S A G P+
Sbjct: 839 SASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGACGSPS------- 891
Query: 726 PAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPE 785
APTP+ G +T + G H G SLSS P +P S A P+P
Sbjct: 892 -APTPS---AGVAATTIAGFGHFHKALGGSLSSSDSPL-LTPLQPGARSPQAAQPSPAP- 945
Query: 786 PGQQLGQGLDDSGNLLSPAPMDWD------MLMEPPFLFTAVPPSGELAPPAVPPQAPRC 839
PG + G GL + + L P P L +PP + +G L+ P PP+ P
Sbjct: 946 PGARGGLGLPE--HFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEP 1003
Query: 840 HVVIRGLC-GEQPMCWEVGVGLETLWGPGDGSQPP 873
++ G G P+ + GL PG PP
Sbjct: 1004 PSLVAGASGGASPVGFTPRGGLSP---PGHSPGPP 1035
Score = 36.2 bits (82), Expect = 0.20
Identities = 73/294 (24%), Positives = 98/294 (33%), Gaps = 47/294 (15%)
Query: 490 GLSALSRGQAYFLRPGQRLQPMLVQALRKALEPALSDISVDWFVPDTVEALLTPREIPAL 549
GL L GQ R +RLQ ++ AL A PA S VD TP +
Sbjct: 813 GLGNLGAGQTP--RHLKRLQSLIPSALGSA-SPASSPSQVD-----------TPSS--SS 856
Query: 550 YPGDQLLGYCSLFRVDGFRSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEP 609
+ QL G+ + P G P SS S P +PSA +P T+
Sbjct: 857 FHIQQLAGFSA-----------PAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVAATTIA 905
Query: 610 LGTGTVSAELSSPWAARDSEQSTD----ALTDPVTDPGPNPSDTAIWRRIFQSSYIREQY 665
G G L ++ DS T A + P P P + E +
Sbjct: 906 -GFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGAR------GGLGLPEHF 958
Query: 666 VLTHCSA-SPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCP 724
+ S+ SP PG G S G + S P PP Q SL G G+
Sbjct: 959 LPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVG 1018
Query: 725 L--------PAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRP 770
P +P P + + H + L + S PP + Q G P
Sbjct: 1019 FTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTP 1072
Score = 30.8 bits (68), Expect = 8.4
Identities = 54/203 (26%), Positives = 69/203 (33%), Gaps = 38/203 (18%)
Query: 571 PPGGQEPGWQSSGGSVFPSPEE-------APSAASPGTEPTGTSEP-LGTGTVSAELSSP 622
PP EP +G S SP +P SPG T S P +G+ + L P
Sbjct: 997 PPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPP 1056
Query: 623 WAARDSEQSTDALTDPVTDPGPNPSD----TAIWRRIFQSSYIREQYVLTHCSAS----- 673
++ Q P PG D +A + Q + H S
Sbjct: 1057 ASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAF 1116
Query: 674 ---PEPGPGSTGSSESPGSQGPGSPEGSAP--------------LEPP-SQQGCRSLAWG 715
P G GS GS S G PG P G+ P L PP S G R+ + G
Sbjct: 1117 PLFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSG 1176
Query: 716 EP---AGSRSCPLPAPTPAPFKV 735
P AG + P P P K+
Sbjct: 1177 GPPLTAGPQREPGARPEPVRSKL 1199
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 48.5 bits (114), Expect = 4e-05
Identities = 76/317 (23%), Positives = 109/317 (34%), Gaps = 57/317 (17%)
Query: 543 PREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQEPGWQSSGGSV-------FPSPEEAPS 595
P+ IPAL Q LG S+ + + P EP Q G V PSPE +
Sbjct: 124 PKSIPALSMETQKLG--SVLSPESPKPTPLTPLEP--QKPGSVVSPELQTPLPSPEPSKP 179
Query: 596 AASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWRRI 655
A+ EP S P+ A + SP + + S +++ +++P P
Sbjct: 180 ASVSSPEPP-KSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQ-------- 230
Query: 656 FQSSYIREQYVLTHCSASPEP-GPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAW 714
S PE GP S S ESP P G +P P +
Sbjct: 231 ---------------SHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTS 275
Query: 715 GEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPG---------RANQ 765
EP P P+ +P P+K + R A G PPG A+
Sbjct: 276 PEPRK----PSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASS 331
Query: 766 VPGRPRKPSLGAILDGP-------SPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLF 818
P +P KP+ ++ GP SP P + S S +P W P +
Sbjct: 332 GPWKPAKPA-PSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESW 390
Query: 819 TAVPPSGELAPPAVPPQ 835
+ PP P + P+
Sbjct: 391 KSGPPELRKTAPTLSPE 407
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 48.1 bits (113), Expect = 5e-05
Identities = 56/186 (30%), Positives = 70/186 (37%), Gaps = 24/186 (12%)
Query: 672 ASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSR-SC-PLPA-- 727
A+PEP P G Q PG P PL P + P GS SC P+PA
Sbjct: 85 AAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAA 144
Query: 728 -----PTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRA-NQVPGRPRKPSLGAILDG 781
P PAP A + G AA AG PG PG+P P L+G
Sbjct: 145 AVAAGPEPAP----AGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNG 200
Query: 782 P-----SPEPGQQLGQGLDDSGNLLSPAP---MDWDMLMEPPFLFTAVPPS-GELAPPAV 832
S +++ L P P ++ PPF+ A PP+ +PPA
Sbjct: 201 SAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAA 260
Query: 833 P-PQAP 837
P P AP
Sbjct: 261 PAPAAP 266
Score = 47.0 bits (110), Expect = 1e-04
Identities = 97/418 (23%), Positives = 132/418 (31%), Gaps = 110/418 (26%)
Query: 571 PPGGQ-EPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSE 629
PP + P + S GS P P A AA P P G ++P G ++A
Sbjct: 121 PPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAAR----------- 169
Query: 630 QSTDALTDPVTDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGS 689
P PGP P P PGPG
Sbjct: 170 ------AGPGPGPGPGP--------------------------GPGPGPGKPA------- 190
Query: 690 QGPGSPE---GSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQ 746
GPG+ + GSA L +++ + PLP P AP V V
Sbjct: 191 -GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPA-APGTVIQTPPFV---- 244
Query: 747 HRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPM 806
++PP A P P P+ A P P P PAP
Sbjct: 245 --------GAAAPPAPA--APSPPAAPAPAAPAAAPPPPP----------------PAPA 278
Query: 807 DWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGP 866
L PP A PP+ A PAVPP A + G G+ GP
Sbjct: 279 ---TLARPPG-HPAGPPT---AAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGP 331
Query: 867 GDGSQPPSPPVREAAWDQALHRLTAASVVRDNEQLALRGGAETTADRGHARRCWLRALQT 926
G + P+P V+ + + + A+ + LA G A T A +
Sbjct: 332 GAAAAAPAPGVKAESPKRVVQAAPPAA-----QTLAASGPASTAAS---------MVIGP 377
Query: 927 SKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPASHSHLDAAPLPTVV 984
+ + PS P T + GA + + TP A+ S + A PTV+
Sbjct: 378 TMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSR---TPTATTSGIRATLTPTVL 432
Score = 35.8 bits (81), Expect = 0.26
Identities = 79/345 (22%), Positives = 106/345 (30%), Gaps = 70/345 (20%)
Query: 748 RAALAGRS-----LSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLS 802
RAA AG SP G A P P + + GA P P P G+ G
Sbjct: 51 RAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGA---APEPPPA---GRARPGGGGPQR 104
Query: 803 PAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVG--- 859
P P + P PP+ +L PP P+ G C P V G
Sbjct: 105 PGPPSPRRPLVPA---GPAPPAAKLRPP---PEGSA------GSCAPVPAAAAVAAGPEP 152
Query: 860 -------------LETLWGPGDGSQP---PSPPVREAAWDQALHRLTAASVVRDNEQLAL 903
L GPG G P P P + A A L ++ + ++ A
Sbjct: 153 APAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAA- 211
Query: 904 RGGAETTADRGHARRCWL-------RALQT-----SKVSSAPSCFTCPVAVDATTREVLP 951
A + + G A L +QT + AP+ + P A P
Sbjct: 212 -APAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 952 GALQVCSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGNSKRALG 1011
+ A PPG P + A P P + G +PA A A G
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA----------PAAG 320
Query: 1012 DPA----TPTEGPRRPPPRPPCRLSMGRRHKLCSPDPGQANNSEG 1052
PA P G P P + +R +P Q + G
Sbjct: 321 GPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASG 365
Score = 33.1 bits (74), Expect = 1.7
Identities = 45/158 (28%), Positives = 55/158 (34%), Gaps = 41/158 (25%)
Query: 22 ACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVSGFEAEAAGRRVSFQLQSRRRS 81
A A P V+A R Q P P A+ SG + AA + +Q S
Sbjct: 333 AAAAAPAPGVKAESPKRVVQAAP-------PAAQTLAASGPASTAASMVIGPTMQGALPS 385
Query: 82 QAACCRALGPGLGTPTPRRCAQGHLVLDLAQARSTLVLPTGIIAAAGTMTVTLHSSRELP 141
AA P GTPT LP G AAG +T +L SR
Sbjct: 386 PAA---VPPPAPGTPTG--------------------LPKG---AAGAVTQSL--SRTPT 417
Query: 142 SRPDGVLHVALPTVLTPLAPPGPPGPPR------PPGL 173
+ G+ PTVL P P P P PPG+
Sbjct: 418 ATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGM 455
Score = 32.7 bits (73), Expect = 2.2
Identities = 49/174 (28%), Positives = 55/174 (31%), Gaps = 36/174 (20%)
Query: 90 GPGLGTPTPRRCAQ---GHLVL-----------DLAQARSTLVLPTGIIAAAGTMTVTL- 134
GPG G P AQ G L L +LP AA GT+ T
Sbjct: 183 GPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPP 242
Query: 135 HSSRELPSRPDGVLHVALPTVLTPLAPPGPPGP-----PRPPGLCDDSPTSCFGVGSLQE 189
P P A P P A P PP P RPPG PT+ V
Sbjct: 243 FVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVP---- 298
Query: 190 EGLAWEELAAPRDVFSGPARCPAPYTFSFEMLVTGPCLLAGLESPSHALRADAP 243
AA +G A PAP GP ++G P A A AP
Sbjct: 299 -----PPAAAQNGGSAGAAPAPAP-------AAGGPAGVSGQPGPGAAAAAPAP 340
>gi|27735129 hypothetical protein LOC148345 [Homo sapiens]
Length = 656
Score = 47.8 bits (112), Expect = 7e-05
Identities = 91/329 (27%), Positives = 116/329 (35%), Gaps = 78/329 (23%)
Query: 588 PSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPS 647
P P EA P T SEP V +SPW R + ALT PV+ +PS
Sbjct: 298 PPPGEAGIPGHPTPPATLPSEP-----VEGVQASPWRPRPVLPTHPALTLPVSSDASSPS 352
Query: 648 DTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQ 707
A E +++ S + G G+ + P ++ PGSP
Sbjct: 353 PPA------PRPERPESLLVSGPSVTLTEGLGTVRPEQDP-AKSPGSP-----------L 394
Query: 708 GCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEV--LGRQHRAALAGRSLSS--PPGRA 763
R L+ G+ A AP P + G S E L R RA LA L S PG
Sbjct: 395 LLRGLSSGDVA--------APEPIMGEPGQASEEFQPLARPWRATLAAEELVSHRSPGEP 446
Query: 764 NQV-------------PGRPRKPSLGAILDGPSPEPGQQL-GQGLD---------DSGNL 800
+ PG PR+ + G +D S EP Q + G GL + ++
Sbjct: 447 QETCSGTEVERPRQTGPGLPREGARGH-MDLSSSEPSQDIEGPGLSILPARDATFSTPSV 505
Query: 801 LSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVG--- 857
P P W L P L T +P AP AV P P +R P VG
Sbjct: 506 RQPDPSAW--LSSGPEL-TGMPRVRLAAPLAVLPMEPLPPEPVRPAALLTPEASSVGGPD 562
Query: 858 ------------VGLETLWGPGDGSQPPS 874
VG E WG S PPS
Sbjct: 563 QARYLESAPGWPVGQEE-WGVAHTSSPPS 590
Score = 35.4 bits (80), Expect = 0.34
Identities = 66/237 (27%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 7 PSSWTPLPLTDSWVRACANG---PCLSVRARLTYRNPQPQP-VDGVFVYPLAEAEVVSGF 62
P WT +S+ + +G P + R T P P P V P A ++V +
Sbjct: 187 PVLWT----VESFFQCVGSGTEPPASTAALRTTPSPPSPGPETPPAGVPPAASSQVWAA- 241
Query: 63 EAEAAGRRVSFQLQSRRRSQAACCRALGPGLGTPTPRRCAQ--GHLVLDLAQARSTLVLP 120
AA +S L R S A + LGP L T P R Q ++ + QA+ P
Sbjct: 242 -GPAAQEWLSRDLL-HRPSDALAKKGLGPFLQTAKPARRGQTSASILPRVVQAQRGPQPP 299
Query: 121 TGIIAAAG--TMTVTLHSS-----RELPSRPDGVL--HVALP-TVLTPLAPPGPPG--PP 168
G G T TL S + P RP VL H AL V + + P PP P
Sbjct: 300 PGEAGIPGHPTPPATLPSEPVEGVQASPWRPRPVLPTHPALTLPVSSDASSPSPPAPRPE 359
Query: 169 RPPGLCDDSP--TSCFGVGSLQEE--------------GLAWEELAAPRDVFSGPAR 209
RP L P T G+G+++ E GL+ ++AAP + P +
Sbjct: 360 RPESLLVSGPSVTLTEGLGTVRPEQDPAKSPGSPLLLRGLSSGDVAAPEPIMGEPGQ 416
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 47.8 bits (112), Expect = 7e-05
Identities = 47/161 (29%), Positives = 57/161 (35%), Gaps = 13/161 (8%)
Query: 674 PEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPF 733
P P PG+ P P P G+A PPS + G P S P P P P
Sbjct: 246 PVPPPGALPPGIPPAMPPPPMPPGAAGHGPPS---AGTPGAGHPGHGHSHPHPFP-PGGM 301
Query: 734 KVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQG 793
+S L H G + PPG Q P RP + P P P +G
Sbjct: 302 PHPGMSQMQLA-HHGPHGLGHPHAGPPGSGGQPPPRPPPG-----MPHPGPPPMGMPPRG 355
Query: 794 LDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPP 834
+ P PM + PP L +PP G PP PP
Sbjct: 356 PPFGSPMGHPGPMPPHGMRGPPPL---MPPHGYTGPPRPPP 393
Score = 32.7 bits (73), Expect = 2.2
Identities = 58/240 (24%), Positives = 71/240 (29%), Gaps = 55/240 (22%)
Query: 571 PPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVS---AELSSPWAARD 627
PPG PG FP P P A PG P P+ G +P A
Sbjct: 234 PPGMPPPG-------SFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHP 286
Query: 628 SEQSTDALTDPVTDPG--PNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSE 685
+ P PG P+P S ++ + H P GP +G +
Sbjct: 287 GHGHSHPHPFP---PGGMPHPG----------MSQMQLAHHGPHGLGHPHAGPPGSG-GQ 332
Query: 686 SPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGR 745
P PG P P PP R +G P G P P P
Sbjct: 333 PPPRPPPGMPH---PGPPPMGMPPRGPPFGSPMGH-----PGPMPP-------------- 370
Query: 746 QHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAP 805
+ G PP + G PR P G GP P P + G L P P
Sbjct: 371 ---HGMRGPPPLMPP---HGYTGPPRPPPYG-YQRGPLPPPRPTPRPPVPPRGPLRGPLP 423
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 47.4 bits (111), Expect = 9e-05
Identities = 66/240 (27%), Positives = 83/240 (34%), Gaps = 51/240 (21%)
Query: 671 SASPEPGPGSTGSSESPGSQGPGSP----EGSAPLEPPSQQGCRSLAWGE---------- 716
S +P PG + SP P +P + + PLEP R +A
Sbjct: 1108 SRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1167
Query: 717 PAGSRSCPLPAPTPAPFK-VGALSTEVLGRQHRAALA----------GRSLSSP------ 759
P+G+RS PAPT F +GA + + R+ A GRS SP
Sbjct: 1168 PSGARS---PAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPSPQAGLAG 1224
Query: 760 PGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFT 819
PG A RP P ++ P G+ +S + S L EP
Sbjct: 1225 PGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQA 1284
Query: 820 AVPPSGELAPPAVPPQAPRCHVVI-RGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVR 878
A PP L PPA Q P V G QP LET PP PP R
Sbjct: 1285 AFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQP-------NLET---------PPQPPPR 1328
Score = 39.3 bits (90), Expect = 0.024
Identities = 57/231 (24%), Positives = 83/231 (35%), Gaps = 35/231 (15%)
Query: 944 ATTREVLPGALQVCSSE-----PAEPPGTPPASHSHLDAAPLPTVVY--SKGLQRG-SPA 995
A E+LP LQ SS P+ P T P + P+P++ S+ R P
Sbjct: 1059 AEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPP 1118
Query: 996 GAWDSDQNGNSKRALG--DPATPTEGPRRPPPR---PPCRLSMGRRHKLCSPDPGQANNS 1050
A S + L DPA P E R PPPR PP R + +R P P S
Sbjct: 1119 SAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR-----PPPPSGARS 1173
Query: 1051 EGSDHDYLPLVRLQEAPGSFRLDAPFCAAVRISQERLCRASPFAVHRASLSPTSASLPWA 1110
+ +PG R +E SP + ++ + S
Sbjct: 1174 PAPTRKEFGGIGAPPSPGVAR------------REMEAPKSPGTTRKDNIGRSQPSPQAG 1221
Query: 1111 LLGPGVGQGDSATASCSPSPS--SGSEGPGQVDSGR---GSDTEASEGAEG 1156
L GPG +A + P S + + +GR S ++ SE ++G
Sbjct: 1222 LAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKG 1272
Score = 32.3 bits (72), Expect = 2.9
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 126 AAGTMTVTLHSSRELPSR-PDGVLHVALPTVLTPLAPPGPPGPP-RPP---GLCDDSPT- 179
+A + + + LP + P L P P+APP P PP RPP G +PT
Sbjct: 1119 SAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTR 1178
Query: 180 -SCFGVGSLQEEGLAWEELAAPR 201
G+G+ G+A E+ AP+
Sbjct: 1179 KEFGGIGAPPSPGVARREMEAPK 1201
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 47.4 bits (111), Expect = 9e-05
Identities = 66/240 (27%), Positives = 83/240 (34%), Gaps = 51/240 (21%)
Query: 671 SASPEPGPGSTGSSESPGSQGPGSP----EGSAPLEPPSQQGCRSLAWGE---------- 716
S +P PG + SP P +P + + PLEP R +A
Sbjct: 1108 SRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1167
Query: 717 PAGSRSCPLPAPTPAPFK-VGALSTEVLGRQHRAALA----------GRSLSSP------ 759
P+G+RS PAPT F +GA + + R+ A GRS SP
Sbjct: 1168 PSGARS---PAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPSPQAGLAG 1224
Query: 760 PGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFT 819
PG A RP P ++ P G+ +S + S L EP
Sbjct: 1225 PGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQA 1284
Query: 820 AVPPSGELAPPAVPPQAPRCHVVI-RGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPVR 878
A PP L PPA Q P V G QP LET PP PP R
Sbjct: 1285 AFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQP-------NLET---------PPQPPPR 1328
Score = 39.3 bits (90), Expect = 0.024
Identities = 57/231 (24%), Positives = 83/231 (35%), Gaps = 35/231 (15%)
Query: 944 ATTREVLPGALQVCSSE-----PAEPPGTPPASHSHLDAAPLPTVVY--SKGLQRG-SPA 995
A E+LP LQ SS P+ P T P + P+P++ S+ R P
Sbjct: 1059 AEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPP 1118
Query: 996 GAWDSDQNGNSKRALG--DPATPTEGPRRPPPR---PPCRLSMGRRHKLCSPDPGQANNS 1050
A S + L DPA P E R PPPR PP R + +R P P S
Sbjct: 1119 SAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR-----PPPPSGARS 1173
Query: 1051 EGSDHDYLPLVRLQEAPGSFRLDAPFCAAVRISQERLCRASPFAVHRASLSPTSASLPWA 1110
+ +PG R +E SP + ++ + S
Sbjct: 1174 PAPTRKEFGGIGAPPSPGVAR------------REMEAPKSPGTTRKDNIGRSQPSPQAG 1221
Query: 1111 LLGPGVGQGDSATASCSPSPS--SGSEGPGQVDSGR---GSDTEASEGAEG 1156
L GPG +A + P S + + +GR S ++ SE ++G
Sbjct: 1222 LAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKG 1272
Score = 32.3 bits (72), Expect = 2.9
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 126 AAGTMTVTLHSSRELPSR-PDGVLHVALPTVLTPLAPPGPPGPP-RPP---GLCDDSPT- 179
+A + + + LP + P L P P+APP P PP RPP G +PT
Sbjct: 1119 SAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTR 1178
Query: 180 -SCFGVGSLQEEGLAWEELAAPR 201
G+G+ G+A E+ AP+
Sbjct: 1179 KEFGGIGAPPSPGVARREMEAPK 1201
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 47.4 bits (111), Expect = 9e-05
Identities = 85/346 (24%), Positives = 116/346 (33%), Gaps = 63/346 (18%)
Query: 517 RKALEPALSDISVDWFVPDTVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQE 576
R L P+ PD P E+ A P LG S + D PP
Sbjct: 337 RLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQ-SQSQADERAGTPPPAP- 394
Query: 577 PGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALT 636
P P AP P + PL +A P + +S+
Sbjct: 395 -----------PLPPPAPPLPPPAPPLPPAAPPLPCAQKAAH--PPAGFTKTPKSSSPAL 441
Query: 637 DPVTDPGPNPSDTAI-----WRRIFQSSYIREQYVLTHCSASPE-------PGPGSTGSS 684
P +P P+P +TA WR Q +R + C + E PGP S
Sbjct: 442 KPKPNP-PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQS 500
Query: 685 ESPGSQGPGSPEGSAPLEPPSQQ----------GCRSLAWGEPAGSRSCP----LPAPTP 730
+ G +GP PE L P++ G SL E A S + P +P +P
Sbjct: 501 KE-GKKGPRLPEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSP 559
Query: 731 APFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQL 790
P RQ R L R S+ A KPS+G++ P E G+
Sbjct: 560 TPSV----------RQIRNELEARLSSAAEKEA--------KPSIGSLPPKPRLEGGRIC 601
Query: 791 GQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQA 836
G DD L P + T++ P L PA+PP+A
Sbjct: 602 ENGADDD-KLSKPVAKNLPPQSTTLLPTTSLQPKAMLG-PAIPPKA 645
Score = 42.4 bits (98), Expect = 0.003
Identities = 55/226 (24%), Positives = 80/226 (35%), Gaps = 41/226 (18%)
Query: 921 LRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPASHSHLDAAPL 980
L AL S+PS T P + +P A + P PP PA P
Sbjct: 194 LEALSPPHTLSSPSIPTPP--------DFIPPAPPLAFLAPPPPPVPAPAP-------PA 238
Query: 981 PTVVYSKGLQRGSPAGA--WDSDQNGNSKRALGDPATPTEGPRRPP-----PRPPCRLSM 1033
P ++ G + P G W SD N ++A A+P P P P P L+
Sbjct: 239 PASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTF 298
Query: 1034 GRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAP---------GSFRLDAPFCAAVRISQ 1084
R K+ P P + ++ +P+ QEAP RL P +R +
Sbjct: 299 PRSFKVPPPTPVRTSS--------IPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPAS 350
Query: 1085 ERLCRASPFAVHRASLSPTSASLPWALLGPGVGQGDSATASCSPSP 1130
+ +P L T+ + P LG Q D + P+P
Sbjct: 351 QVYPDRAPEPDCPGELKATAPASP--RLGQSQSQADERAGTPPPAP 394
Score = 36.2 bits (82), Expect = 0.20
Identities = 59/232 (25%), Positives = 73/232 (31%), Gaps = 49/232 (21%)
Query: 580 QSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPV 639
Q + G P+P A E TGTS L G + SS R + D L P
Sbjct: 87 QENHGLAVPTPSVPDDFADK--EVTGTSS-LVNGNLRL-YSSVGDLRPGQYGQDLLIPP- 141
Query: 640 TDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSA 699
PGP P Q + SP P P ST P P P A
Sbjct: 142 PPPGPAPGPP--------------QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMA 187
Query: 700 P--------LEPPSQQGCRSLAW------GEPAGSRSCPLPAPTPAPFKVGALSTEVLGR 745
P L PP S+ P + P P P PAP S +G
Sbjct: 188 PPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGT 247
Query: 746 -----------QHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEP 786
+ AL GR + + P P+ +L GP+PEP
Sbjct: 248 RLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSAL-----GPNPEP 294
Score = 32.7 bits (73), Expect = 2.2
Identities = 48/204 (23%), Positives = 67/204 (32%), Gaps = 21/204 (10%)
Query: 585 SVFPSPEEAPSAA-SPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPG 643
++ P+ P A P P T EP ++ W A + + T G
Sbjct: 624 TLLPTTSLQPKAMLGPAIPPKATPEP-----AIPPKATLWPATPPKATLGPATPLKATSG 678
Query: 644 PNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEP 703
P A S+ + A + GP G E P SQ +P +
Sbjct: 679 PTTPLKATSGPAIASTATTLPTTTSQLMAEKDSGPA--GQPEKPASQEVSTPSQARGEGS 736
Query: 704 PSQ------QGCRSLAWGEPAGSRSCPLPAPTPAPFKV----GALSTEVLGRQHRAALAG 753
PS+ QG RS A P ++ P P +K +LS EV A G
Sbjct: 737 PSEATRLPTQGARSSAAFPP---KTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGG 793
Query: 754 RSLSSPPGRANQVPGRPRKPSLGA 777
+ P + PG P KP A
Sbjct: 794 AAGPGEPVEVKEPPGLPAKPPASA 817
Score = 31.6 bits (70), Expect = 4.9
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 27/118 (22%)
Query: 724 PLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPS 783
P P P PAP +S G L SPP A P P L +L+ P
Sbjct: 140 PPPPPGPAPGPPQDISEPP---------GGSPLPSPPSTA------PPPPPL--LLEPPP 182
Query: 784 PE----PGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAP 837
P P + + L L SP+ + PP PP LAPP P AP
Sbjct: 183 PPSMAPPPPPVLEALSPPHTLSSPS------IPTPPDFIPPAPPLAFLAPPPPPVPAP 234
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 47.4 bits (111), Expect = 9e-05
Identities = 85/346 (24%), Positives = 116/346 (33%), Gaps = 63/346 (18%)
Query: 517 RKALEPALSDISVDWFVPDTVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQE 576
R L P+ PD P E+ A P LG S + D PP
Sbjct: 337 RLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQ-SQSQADERAGTPPPAP- 394
Query: 577 PGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALT 636
P P AP P + PL +A P + +S+
Sbjct: 395 -----------PLPPPAPPLPPPAPPLPPAAPPLPCAQKAAH--PPAGFTKTPKSSSPAL 441
Query: 637 DPVTDPGPNPSDTAI-----WRRIFQSSYIREQYVLTHCSASPE-------PGPGSTGSS 684
P +P P+P +TA WR Q +R + C + E PGP S
Sbjct: 442 KPKPNP-PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQS 500
Query: 685 ESPGSQGPGSPEGSAPLEPPSQQ----------GCRSLAWGEPAGSRSCP----LPAPTP 730
+ G +GP PE L P++ G SL E A S + P +P +P
Sbjct: 501 KE-GKKGPRLPEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSP 559
Query: 731 APFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQL 790
P RQ R L R S+ A KPS+G++ P E G+
Sbjct: 560 TPSV----------RQIRNELEARLSSAAEKEA--------KPSIGSLPPKPRLEGGRIC 601
Query: 791 GQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQA 836
G DD L P + T++ P L PA+PP+A
Sbjct: 602 ENGADDD-KLSKPVAKNLPPQSTTLLPTTSLQPKAMLG-PAIPPKA 645
Score = 42.4 bits (98), Expect = 0.003
Identities = 55/226 (24%), Positives = 80/226 (35%), Gaps = 41/226 (18%)
Query: 921 LRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPASHSHLDAAPL 980
L AL S+PS T P + +P A + P PP PA P
Sbjct: 194 LEALSPPHTLSSPSIPTPP--------DFIPPAPPLAFLAPPPPPVPAPAP-------PA 238
Query: 981 PTVVYSKGLQRGSPAGA--WDSDQNGNSKRALGDPATPTEGPRRPP-----PRPPCRLSM 1033
P ++ G + P G W SD N ++A A+P P P P P L+
Sbjct: 239 PASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTF 298
Query: 1034 GRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAP---------GSFRLDAPFCAAVRISQ 1084
R K+ P P + ++ +P+ QEAP RL P +R +
Sbjct: 299 PRSFKVPPPTPVRTSS--------IPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPAS 350
Query: 1085 ERLCRASPFAVHRASLSPTSASLPWALLGPGVGQGDSATASCSPSP 1130
+ +P L T+ + P LG Q D + P+P
Sbjct: 351 QVYPDRAPEPDCPGELKATAPASP--RLGQSQSQADERAGTPPPAP 394
Score = 36.2 bits (82), Expect = 0.20
Identities = 59/232 (25%), Positives = 73/232 (31%), Gaps = 49/232 (21%)
Query: 580 QSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPV 639
Q + G P+P A E TGTS L G + SS R + D L P
Sbjct: 87 QENHGLAVPTPSVPDDFADK--EVTGTSS-LVNGNLRL-YSSVGDLRPGQYGQDLLIPP- 141
Query: 640 TDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSA 699
PGP P Q + SP P P ST P P P A
Sbjct: 142 PPPGPAPGPP--------------QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMA 187
Query: 700 P--------LEPPSQQGCRSLAW------GEPAGSRSCPLPAPTPAPFKVGALSTEVLGR 745
P L PP S+ P + P P P PAP S +G
Sbjct: 188 PPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGT 247
Query: 746 -----------QHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEP 786
+ AL GR + + P P+ +L GP+PEP
Sbjct: 248 RLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSAL-----GPNPEP 294
Score = 32.7 bits (73), Expect = 2.2
Identities = 48/204 (23%), Positives = 67/204 (32%), Gaps = 21/204 (10%)
Query: 585 SVFPSPEEAPSAA-SPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPG 643
++ P+ P A P P T EP ++ W A + + T G
Sbjct: 624 TLLPTTSLQPKAMLGPAIPPKATPEP-----AIPPKATLWPATPPKATLGPATPLKATSG 678
Query: 644 PNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEP 703
P A S+ + A + GP G E P SQ +P +
Sbjct: 679 PTTPLKATSGPAIASTATTLPTTTSQLMAEKDSGPA--GQPEKPASQEVSTPSQARGEGS 736
Query: 704 PSQ------QGCRSLAWGEPAGSRSCPLPAPTPAPFKV----GALSTEVLGRQHRAALAG 753
PS+ QG RS A P ++ P P +K +LS EV A G
Sbjct: 737 PSEATRLPTQGARSSAAFPP---KTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGG 793
Query: 754 RSLSSPPGRANQVPGRPRKPSLGA 777
+ P + PG P KP A
Sbjct: 794 AAGPGEPVEVKEPPGLPAKPPASA 817
Score = 31.6 bits (70), Expect = 4.9
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 27/118 (22%)
Query: 724 PLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPS 783
P P P PAP +S G L SPP A P P L +L+ P
Sbjct: 140 PPPPPGPAPGPPQDISEPP---------GGSPLPSPPSTA------PPPPPL--LLEPPP 182
Query: 784 PE----PGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAP 837
P P + + L L SP+ + PP PP LAPP P AP
Sbjct: 183 PPSMAPPPPPVLEALSPPHTLSSPS------IPTPPDFIPPAPPLAFLAPPPPPVPAP 234
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 47.4 bits (111), Expect = 9e-05
Identities = 85/346 (24%), Positives = 116/346 (33%), Gaps = 63/346 (18%)
Query: 517 RKALEPALSDISVDWFVPDTVEALLTPREIPALYPGDQLLGYCSLFRVDGFRSRPPGGQE 576
R L P+ PD P E+ A P LG S + D PP
Sbjct: 337 RLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQ-SQSQADERAGTPPPAP- 394
Query: 577 PGWQSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALT 636
P P AP P + PL +A P + +S+
Sbjct: 395 -----------PLPPPAPPLPPPAPPLPPAAPPLPCAQKAAH--PPAGFTKTPKSSSPAL 441
Query: 637 DPVTDPGPNPSDTAI-----WRRIFQSSYIREQYVLTHCSASPE-------PGPGSTGSS 684
P +P P+P +TA WR Q +R + C + E PGP S
Sbjct: 442 KPKPNP-PSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQS 500
Query: 685 ESPGSQGPGSPEGSAPLEPPSQQ----------GCRSLAWGEPAGSRSCP----LPAPTP 730
+ G +GP PE L P++ G SL E A S + P +P +P
Sbjct: 501 KE-GKKGPRLPEKETLLSLPAKDTPPGVPEKSLGGSSLTETEAAPSLTLPSVDYIPQDSP 559
Query: 731 APFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQL 790
P RQ R L R S+ A KPS+G++ P E G+
Sbjct: 560 TPSV----------RQIRNELEARLSSAAEKEA--------KPSIGSLPPKPRLEGGRIC 601
Query: 791 GQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQA 836
G DD L P + T++ P L PA+PP+A
Sbjct: 602 ENGADDD-KLSKPVAKNLPPQSTTLLPTTSLQPKAMLG-PAIPPKA 645
Score = 42.4 bits (98), Expect = 0.003
Identities = 55/226 (24%), Positives = 80/226 (35%), Gaps = 41/226 (18%)
Query: 921 LRALQTSKVSSAPSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPASHSHLDAAPL 980
L AL S+PS T P + +P A + P PP PA P
Sbjct: 194 LEALSPPHTLSSPSIPTPP--------DFIPPAPPLAFLAPPPPPVPAPAP-------PA 238
Query: 981 PTVVYSKGLQRGSPAGA--WDSDQNGNSKRALGDPATPTEGPRRPP-----PRPPCRLSM 1033
P ++ G + P G W SD N ++A A+P P P P P L+
Sbjct: 239 PASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTF 298
Query: 1034 GRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAP---------GSFRLDAPFCAAVRISQ 1084
R K+ P P + ++ +P+ QEAP RL P +R +
Sbjct: 299 PRSFKVPPPTPVRTSS--------IPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPAS 350
Query: 1085 ERLCRASPFAVHRASLSPTSASLPWALLGPGVGQGDSATASCSPSP 1130
+ +P L T+ + P LG Q D + P+P
Sbjct: 351 QVYPDRAPEPDCPGELKATAPASP--RLGQSQSQADERAGTPPPAP 394
Score = 36.2 bits (82), Expect = 0.20
Identities = 59/232 (25%), Positives = 73/232 (31%), Gaps = 49/232 (21%)
Query: 580 QSSGGSVFPSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPV 639
Q + G P+P A E TGTS L G + SS R + D L P
Sbjct: 87 QENHGLAVPTPSVPDDFADK--EVTGTSS-LVNGNLRL-YSSVGDLRPGQYGQDLLIPP- 141
Query: 640 TDPGPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSA 699
PGP P Q + SP P P ST P P P A
Sbjct: 142 PPPGPAPGPP--------------QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMA 187
Query: 700 P--------LEPPSQQGCRSLAW------GEPAGSRSCPLPAPTPAPFKVGALSTEVLGR 745
P L PP S+ P + P P P PAP S +G
Sbjct: 188 PPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGT 247
Query: 746 -----------QHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEP 786
+ AL GR + + P P+ +L GP+PEP
Sbjct: 248 RLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSAL-----GPNPEP 294
Score = 32.7 bits (73), Expect = 2.2
Identities = 48/204 (23%), Positives = 67/204 (32%), Gaps = 21/204 (10%)
Query: 585 SVFPSPEEAPSAA-SPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPG 643
++ P+ P A P P T EP ++ W A + + T G
Sbjct: 624 TLLPTTSLQPKAMLGPAIPPKATPEP-----AIPPKATLWPATPPKATLGPATPLKATSG 678
Query: 644 PNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEP 703
P A S+ + A + GP G E P SQ +P +
Sbjct: 679 PTTPLKATSGPAIASTATTLPTTTSQLMAEKDSGPA--GQPEKPASQEVSTPSQARGEGS 736
Query: 704 PSQ------QGCRSLAWGEPAGSRSCPLPAPTPAPFKV----GALSTEVLGRQHRAALAG 753
PS+ QG RS A P ++ P P +K +LS EV A G
Sbjct: 737 PSEATRLPTQGARSSAAFPP---KTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGG 793
Query: 754 RSLSSPPGRANQVPGRPRKPSLGA 777
+ P + PG P KP A
Sbjct: 794 AAGPGEPVEVKEPPGLPAKPPASA 817
Score = 31.6 bits (70), Expect = 4.9
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 27/118 (22%)
Query: 724 PLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPS 783
P P P PAP +S G L SPP A P P L +L+ P
Sbjct: 140 PPPPPGPAPGPPQDISEPP---------GGSPLPSPPSTA------PPPPPL--LLEPPP 182
Query: 784 PE----PGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAP 837
P P + + L L SP+ + PP PP LAPP P AP
Sbjct: 183 PPSMAPPPPPVLEALSPPHTLSSPS------IPTPPDFIPPAPPLAFLAPPPPPVPAP 234
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 47.4 bits (111), Expect = 9e-05
Identities = 66/241 (27%), Positives = 78/241 (32%), Gaps = 41/241 (17%)
Query: 663 EQYVLTHCSASPEPGPGSTGSSESPGS--QGPGSPEGSAPLEPPSQQGCRSLAWGEPAGS 720
E+ + H S G G++ SS S Q P EG P P S G P+
Sbjct: 1018 EELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQ 1077
Query: 721 RS-------CPLPAPTPA---------PFKVGALSTEVLGRQHRAALAGRSLSSP----- 759
S PLP PA P + A T Q +GRS SP
Sbjct: 1078 SSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAGLA 1137
Query: 760 -PGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLF 818
PG A RP P ++ P G+ +S + S L EP
Sbjct: 1138 GPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQ 1197
Query: 819 TAVPPSGELAPPAVPPQAPRCHVVI-RGLCGEQPMCWEVGVGLETLWGPGDGSQPPSPPV 877
A PP L PPA Q P V G QP LET PP PP
Sbjct: 1198 AAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQP-------NLET---------PPQPPP 1241
Query: 878 R 878
R
Sbjct: 1242 R 1242
Score = 36.6 bits (83), Expect = 0.15
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 944 ATTREVLPGALQVCSSE-----PAEPPGTPPASHSHLDAAPLPTVVY--SKGLQRG-SPA 995
A E+LP LQ SS P+ P T P + P+P++ S+ R P
Sbjct: 1015 AEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPP 1074
Query: 996 GAWDSDQNGNSKRALG--DPATPTEGPRRPPPRP 1027
A S + L DPA P E R PPPRP
Sbjct: 1075 SAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRP 1108
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 47.4 bits (111), Expect = 9e-05
Identities = 87/319 (27%), Positives = 109/319 (34%), Gaps = 43/319 (13%)
Query: 592 EAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTD----ALTDPVTDPG-PNP 646
EA A SPG P G P G E P A + Q D AL P + G P P
Sbjct: 606 EAGPAGSPG--PPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGP 663
Query: 647 SDTAIWRRIFQSSYIREQYVLTHCSASPEPG-PGSTGS---SESPGSQGPGSP---EGSA 699
+ + ++ + +PG PG+TG S PG QGP P +G
Sbjct: 664 PGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDG 723
Query: 700 PLEPPSQQGCRSLAWGEPA--GSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAG-RSL 756
PS QG + G P G + P P K G + G Q L G +
Sbjct: 724 CTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPG--QPGLPGVQGPPGLKGVQGE 781
Query: 757 SSPPGRANQVP-GRPRKPSLGAI--LDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLME 813
PPGR Q P G P P L I L GP PG + G SP +
Sbjct: 782 PGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGP-----TGEKGAQGSPGVKGATGPVG 836
Query: 814 PPFLFTAVPPS--------------GELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVG 859
PP + PP GE P + C +G M G+
Sbjct: 837 PPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLW 896
Query: 860 LETLWGPGDGSQP--PSPP 876
+ + W PG P P PP
Sbjct: 897 MGSSWQPGPQGPPGIPGPP 915
Score = 40.8 bits (94), Expect = 0.008
Identities = 56/216 (25%), Positives = 71/216 (32%), Gaps = 38/216 (17%)
Query: 674 PEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPF 733
P PG G SPG GP + +GS + PS G P GS P P P
Sbjct: 1163 PPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPS---------GLP-GSPGPPGPPGIQGPA 1212
Query: 734 KVGALSTEVLGRQHRAALAG-------RSLSSPPGRANQVPGRPRKPSLGAILDGPSPEP 786
+ L G+ + L G L PPG + G P P P P P
Sbjct: 1213 GLDGLD----GKDGKPGLRGDPGPAGPPGLMGPPGFKGKT-GHPGLPGPKGDCGKPGP-P 1266
Query: 787 GQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPSGELAPPAVPPQAPRCHVVIRGL 846
G G + + P P G + PP P Q + GL
Sbjct: 1267 GSTGRPGAEGEPGAMGPQGRP--------------GPPGHVGPPGPPGQPGPAGISAVGL 1312
Query: 847 CGEQPMCWEVGV-GLETLWGPGDGSQPPSPPVREAA 881
G++ E G+ GL GP PP P + A
Sbjct: 1313 KGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGA 1348
Score = 36.6 bits (83), Expect = 0.15
Identities = 64/236 (27%), Positives = 86/236 (36%), Gaps = 51/236 (21%)
Query: 676 PGP-GSTGSSESPGSQGPGSPEGSAPLE----------PPSQQGCRSLAW--GEPAGSRS 722
PGP G GSS PG +GPG G ++ P +G ++ G+P
Sbjct: 473 PGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGE 532
Query: 723 CPLPAPTPAPFKVGALSTE----------VLGRQHRAALAGRS--LSSP-------PGRA 763
P P + + E V+G QH + G S + SP PGRA
Sbjct: 533 PGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRA 592
Query: 764 NQVPG-RPRKPSLGAILDGPSPEPGQQLG-QGLDDS-GNLLSPAPMDWDMLMEPPFLFTA 820
VPG + K + G SP P +G G+ + G P P L + A
Sbjct: 593 G-VPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPA-LSNLQDGDVRVVA 650
Query: 821 VP-PSGELAPPAVPPQAPRCHVVIRGLCGEQPMCWEVGVGLETLWGPGDGSQPPSP 875
+P PSGE P P GL G+Q E G+ + GD P P
Sbjct: 651 LPGPSGEKGEPGPPG---------FGLPGKQGKAGERGLKGQ----KGDAGNPGDP 693
Score = 35.8 bits (81), Expect = 0.26
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 679 GSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGAL 738
G G + SPG GP P G + + C +L+ + R LP P+ + G
Sbjct: 605 GEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPP 664
Query: 739 STEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQ 789
+ G+Q +A R L G A PG P P G S EPG Q
Sbjct: 665 GFGLPGKQGKA--GERGLKGQKGDAGN-PGDPGTPGTTG-RPGLSGEPGVQ 711
Score = 32.0 bits (71), Expect = 3.8
Identities = 56/204 (27%), Positives = 70/204 (34%), Gaps = 49/204 (24%)
Query: 670 CSASP----EPG-PGSTGSSESPGSQGPGSPEGSAPLEP------------PSQQGCRSL 712
C SP PG PG G PG +G P G P+ P P QG R L
Sbjct: 1016 CVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPG--PIGPPGFPGAVGSPGLPGLQGERGL 1073
Query: 713 AW-----GEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVP 767
GEP P T P G + G + AG P + +P
Sbjct: 1074 TGLTGDKGEPGPPGQPGYPGATGPPGLPG-----IKGERGYTGSAGEKGEPGPPGSEGLP 1128
Query: 768 GRPRKPSLGAILDGPSPEPGQQLGQGLDDSGNLLSPAPMDWDMLMEPPFLFTAVPPS--G 825
G P GP+ G++ QG +SG D +P F PP G
Sbjct: 1129 GPP----------GPAGPRGERGPQG--NSGE-----KGDQGFQGQPGFPGPPGPPGFPG 1171
Query: 826 ELAPPAVP-PQAPRCHVVIRGLCG 848
++ P P PQA + IRG G
Sbjct: 1172 KVGSPGPPGPQAEKGSEGIRGPSG 1195
Score = 32.0 bits (71), Expect = 3.8
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 153 PTVLTPLAPPGPPG---PPRPPGLCDDSPTSCFGVGSLQEEGLAWEELAAPRDVFSGPAR 209
P + P PGPPG PP PPG P VG + G E A GP
Sbjct: 1278 PGAMGPQGRPGPPGHVGPPGPPG--QPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPG 1335
Query: 210 CPAP 213
P P
Sbjct: 1336 HPGP 1339
Score = 30.8 bits (68), Expect = 8.4
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 158 PLAPPGPPGPPRPPGL 173
P PPG PGPP PPG+
Sbjct: 905 PQGPPGIPGPPGPPGV 920
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 47.4 bits (111), Expect = 9e-05
Identities = 55/219 (25%), Positives = 79/219 (36%), Gaps = 20/219 (9%)
Query: 568 RSRPPGGQEPGWQSSGGSVFPSPEEAPSAASPGTEP--TGTSEPLGTGTVSAELSSPWAA 625
RSR + +G S P+ +P +EP T T P T + + SSP+
Sbjct: 278 RSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYED 337
Query: 626 RDSEQSTDALTDPVTDP-----GPNPSDTAIWRRIFQSSYIREQYVLTHCSASPEPGPGS 680
+D ++ + T P P GP P + + L S EP
Sbjct: 338 KDKDKKEKSATRPSPSPERSSTGPEPPAPT---PLLAERHGGSPQPLATTPLSQEPVNPP 394
Query: 681 TGSSESPGSQGPGSPE-----GSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKV 735
+ +S + P SPE S+ PPS Q + + S P PAP P +
Sbjct: 395 SEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSR--HASSSPESPKPAPAPGSHRE 452
Query: 736 GALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPS 774
+ S R H A +S S P R GR R P+
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHSHTPSRR---MGRSRSPA 488
Score = 42.4 bits (98), Expect = 0.003
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 672 ASPEPG-------PGSTGSSESPGSQGPGSPEGSA-----PLEPPSQQGCRSLAWGEPAG 719
+SPEP P + S S +GP SPEGS+ P PP + R G
Sbjct: 1620 SSPEPKAPAPRALPRRSRSGSSSKGRGP-SPEGSSSTESSPEHPPKSRTAR-------RG 1671
Query: 720 SRSCPLP---APTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRK-PSL 775
SRS P P + TP P + + S+ L R+ R + RS SS P ++ P R R+ PS+
Sbjct: 1672 SRSSPEPKTKSRTP-PRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSV 1730
Query: 776 GAILDGPSPEPGQQ 789
SPEP ++
Sbjct: 1731 S------SPEPAEK 1738
Score = 36.6 bits (83), Expect = 0.15
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 33/190 (17%)
Query: 588 PSPEEAPSAASPGTEPTGTSEPLGTGTVSAELSSPWAARDSEQSTDALTDPVTDPGPNPS 647
P+P+EA P EPT + + S+ SS ++ S S+ + + + + S
Sbjct: 2584 PAPKEAVREGRP-PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
Query: 648 DTAIWRRIFQSSYIREQYVLTHCSASP---EPGPGSTGSSESPGSQGPGSPEGSAPLEP- 703
++ S+SP +PGP + SP PG +P +P
Sbjct: 2643 SSS--------------------SSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPI 2682
Query: 704 PSQQGCRSLAWGEPAGSRSCPLPAPTPAPFKVGALSTEVLGRQHRAALAGRSLSSPPGRA 763
S + RSL++ R P+P P+P + S+E R R G S S R
Sbjct: 2683 DSLRDSRSLSYSPVERRR----PSPQPSPRDQQSSSSE---RGSRRGQRGDSRSPSHKRR 2735
Query: 764 NQVPG-RPRK 772
+ P RP +
Sbjct: 2736 RETPSPRPMR 2745
Score = 33.1 bits (74), Expect = 1.7
Identities = 48/218 (22%), Positives = 81/218 (37%), Gaps = 19/218 (8%)
Query: 958 SSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRGSPAGAWDSDQNGN-SKRALGDPATP 1016
SS P + P+ SH ++P P V ++GS ++Q+ +R+ + +
Sbjct: 819 SSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPD 878
Query: 1017 TEGPRRPPPRPPCRLSMGRRHKLCSPDPGQANNSEGSDHDYLPLV--RLQEAPGSFRLDA 1074
E R P R C S R K +P P Q+ + S + + Q + +
Sbjct: 879 PELKSRTPSRHSCSGSSPPRVKSSTP-PRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPS 937
Query: 1075 PFCAAVRISQERLCRASPFAVHRASLSP----TSASLPWALLGPGVGQGDSATASCSPSP 1130
P R + R SP + + L P + +S P + P S + S SP P
Sbjct: 938 PSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYP 997
Query: 1131 S-----------SGSEGPGQVDSGRGSDTEASEGAEGL 1157
SGS+ P + + S ++ G+ L
Sbjct: 998 KVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSL 1035
Score = 32.0 bits (71), Expect = 3.8
Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 31/178 (17%)
Query: 570 RPPGGQEPGWQSSGGSVFPSPEEAPSAASPG------------TEPTGTSEPLGTGTVSA 617
R P Q+ S+ P ++ P + P T P S+ L +G V+
Sbjct: 2423 RAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVAT 2482
Query: 618 ELSSPWAARDSEQSTDALTDPVTDPGPNPSDTAIWR-----RIFQSSYIREQYVLTHCSA 672
SS + S A P +D G P+ T + + + R + S+
Sbjct: 2483 TTSSA-GDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSS 2541
Query: 673 SPEPGPGSTGSSESPGSQGPGSPEGSAPLEPPSQQGCRSLAWGEPAGSRSCPLPAPTP 730
S S+ SS S GS S S P++P + P P P P
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE-------------VALKRVPSPTPAP 2586
>gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo
sapiens]
Length = 1724
Score = 46.6 bits (109), Expect = 1e-04
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 22/238 (9%)
Query: 335 LSFCPDLSSKPGHLGTATRELLFLLDSSS-------VAHKDAIVLAVKSLPPQTLINLAV 387
L F PDL L + + E++ LD SS + K + A+ + + +N+
Sbjct: 858 LVFQPDLDVDLPDLASES-EVIICLDCSSSMEGVTFLQAKQIALHALSLVGEKQKVNIIQ 916
Query: 388 FGTLVQPLFPESRPCSDDAVQLICESIETLQVPSGPPDVLAALDWAVGQPQHRAYPRQ-- 445
FGT + LF S P + + E I + G D W + YP +
Sbjct: 917 FGTGYKELF--SYPKHITSNTMAAEFIMSATPTMGNTDF-----WKTLRYLSLLYPARGS 969
Query: 446 LFLLTAASPMAATTHRTLELMRWHRGTARCFSFGLGPTCHQ-LLQGLSALSRG--QAYFL 502
+L + TL+L++ R R F+ G+G T ++ +L+ LS G + +
Sbjct: 970 RNILLVSDGHLQDESLTLQLVKRSRPHTRLFACGIGSTANRHVLRILSQCGAGVFEYFNA 1029
Query: 503 RPGQRLQPMLVQALRKALEPALSDISVDW--FVPDTVEALLTPREIPALYPGDQLLGY 558
+ + + + + P+ +SV W PD EAL P ++P+L+ D+LL Y
Sbjct: 1030 KSKHSWRKQIEDQMTRLCSPSCHSVSVKWQQLNPDVPEALQAPAQVPSLFLNDRLLVY 1087
Score = 37.7 bits (86), Expect = 0.069
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 13 LPLTDSWVRACANGPCLSVRARLTYRNPQPQPVDGVFVYPLAEAEVVSGFEAEAAGRRVS 72
+PL D ++ V TY N P++ +++PL + V GFEA G+ +
Sbjct: 621 VPLEDVHIKGRIIDTVAQVIVFQTYTNKSHVPIEAKYIFPLDDKAAVCGFEAFINGKHIV 680
Query: 73 FQLQSRRRSQAACCRALGPGLG 94
+++ + +Q A+ G G
Sbjct: 681 GEIKEKEEAQQEYLEAVTQGHG 702
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,082,592
Number of Sequences: 37866
Number of extensions: 4128943
Number of successful extensions: 38749
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 991
Number of HSP's that attempted gapping in prelim test: 25039
Number of HSP's gapped (non-prelim): 13095
length of query: 1242
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1128
effective length of database: 13,930,794
effective search space: 15713935632
effective search space used: 15713935632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.