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Search of human proteins with 115298672
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115298672 neutrophil cytosolic factor 1 [Homo sapiens]
(390 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115298672 neutrophil cytosolic factor 1 [Homo sapiens] 798 0.0
gi|55749544 SH3 multiple domains 1 [Homo sapiens] 208 8e-54
gi|63055059 SH3 and PX domains 2B [Homo sapiens] 207 1e-53
gi|41281828 NADPH oxidase organizer 1 isoform c [Homo sapiens] 106 3e-23
gi|41281811 NADPH oxidase organizer 1 isoform b [Homo sapiens] 106 3e-23
gi|21389405 NADPH oxidase organizer 1 isoform a [Homo sapiens] 102 6e-22
gi|239752628 PREDICTED: hypothetical protein XP_002347816 [Homo ... 85 1e-16
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 73 4e-13
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 73 4e-13
gi|194294525 intersectin 2 isoform 2 [Homo sapiens] 73 4e-13
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 63 5e-10
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 63 5e-10
gi|47519798 neutrophil cytosolic factor 4 isoform 1 [Homo sapiens] 58 2e-08
gi|163644267 neutrophil cytosolic factor 4 isoform 2 [Homo sapiens] 58 2e-08
gi|20149528 proline-serine-threonine phosphatase interacting pro... 57 3e-08
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 55 8e-08
gi|89886447 nitric oxide synthase trafficker isoform 2 [Homo sap... 54 2e-07
gi|16418431 nitric oxide synthase trafficker isoform 1 [Homo sap... 54 2e-07
gi|11321634 CD2-associated protein [Homo sapiens] 51 2e-06
gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo ... 51 2e-06
gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo ... 51 2e-06
gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ... 51 2e-06
gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo ... 51 2e-06
gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo ... 51 2e-06
gi|224586844 sorbin and SH3 domain containing 2 isoform 3 [Homo ... 51 2e-06
gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo s... 51 2e-06
gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo ... 51 2e-06
gi|166064038 PAK-interacting exchange factor beta isoform a [Hom... 50 3e-06
gi|166064036 PAK-interacting exchange factor beta isoform d [Hom... 50 3e-06
gi|166064034 PAK-interacting exchange factor beta isoform c [Hom... 50 3e-06
>gi|115298672 neutrophil cytosolic factor 1 [Homo sapiens]
Length = 390
Score = 798 bits (2061), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPI 60
MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPI
Sbjct: 1 MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPI 60
Query: 61 EAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKV 120
EAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKV
Sbjct: 61 EAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKV 120
Query: 121 RPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALSTG 180
RPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALSTG
Sbjct: 121 RPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALSTG 180
Query: 181 DVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAV 240
DVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAV
Sbjct: 181 DVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAV 240
Query: 241 EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPP 300
EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPP
Sbjct: 241 EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPP 300
Query: 301 RRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSK 360
RRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSK
Sbjct: 301 RRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSK 360
Query: 361 PQPAVPPRPSADLILNRCSESTKRKLASAV 390
PQPAVPPRPSADLILNRCSESTKRKLASAV
Sbjct: 361 PQPAVPPRPSADLILNRCSESTKRKLASAV 390
>gi|55749544 SH3 multiple domains 1 [Homo sapiens]
Length = 1105
Score = 208 bits (529), Expect = 8e-54
Identities = 106/301 (35%), Positives = 171/301 (56%), Gaps = 12/301 (3%)
Query: 6 IRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAI 65
++ ++ EKR PS+HYVY+ V W D + + +YRR+++ ++ L + FPIE G
Sbjct: 6 VQDATVVDVEKRRNPSKHYVYIINVTWSDSTSQTIYRRYSKFFDLQMQLLDKFPIEGGQK 65
Query: 66 NPENRIIPHLPAPKWFDGQR---AAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKVRP 122
+P+ RIIP LP F A R + EYC L+ LP IS+C + FF+ RP
Sbjct: 66 DPKQRIIPFLPGKILFRRSHIRDVAVKRLKPIDEYCRALVRLPPHISQCDEVFRFFEARP 125
Query: 123 DDLKLPTDNQ-TKKPETYLMPKDGKSTATDITG------PIILQTYRAIANYEKTSGSEM 175
+D+ P ++ + K ++ + +S D+TG P+IL+ Y ++NY+K SE+
Sbjct: 126 EDVNPPKEDYGSSKRKSVWLSSWAESPKKDVTGADATAEPMILEQYVVVSNYKKQENSEL 185
Query: 176 ALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAG--EPYVA 233
+L G+VV+V+EK+ESGWWF ++GW+PA++LE + + D + G E YV
Sbjct: 186 SLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVT 245
Query: 234 IKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQ 293
++ YT+ DE+ +G VEVI K L+GWW IR G+ P+ YL+K+ D+ ++
Sbjct: 246 VQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDDLPTRKKN 305
Query: 294 I 294
+
Sbjct: 306 L 306
Score = 53.9 bits (128), Expect = 2e-07
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 160 TYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDET 219
+Y + Y+K SE++ G V+V+EK ESGWW+ + GW P+ +L DE
Sbjct: 816 SYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFGELEGWAPSHYL----VLDEN 871
Query: 220 EDPEPN 225
E P+P+
Sbjct: 872 EQPDPS 877
Score = 50.4 bits (119), Expect = 3e-06
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 119 KVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALS 178
++ P ++ + N +P G P + Y IA ++ ++
Sbjct: 383 RIAPQRAQISSPNLRTRPPPRRESSLGFQLPKPPEPPSVEVEYYTIAEFQSCISDGISFR 442
Query: 179 TGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPD 217
G EV++K+ GWW+ Q+ K GW PAS+++ P+
Sbjct: 443 GGQKAEVIDKNSGGWWYVQIGEKEGWAPASYIDKRKKPN 481
Score = 45.8 bits (107), Expect = 7e-05
Identities = 22/58 (37%), Positives = 40/58 (68%), Gaps = 11/58 (18%)
Query: 161 YRAIANYE---KTSGSEMALSTGDVVEVVEKSESGWWFCQ----MKAKRGWIPASFLE 211
Y +IA+YE +T+G + +S +EV+E++ +GWW+CQ +K +GW+P+++LE
Sbjct: 1049 YVSIADYEGDEETAGFQEGVS----MEVLERNPNGWWYCQILDGVKPFKGWVPSNYLE 1102
Score = 44.7 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 212 PLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDV 271
P + E E P +Y + AY V+ E+S G V+V+ K GWW +R ++
Sbjct: 803 PCPTKKEWEGPATSY-----MTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFGEL 857
Query: 272 TGYFPSMYL 280
G+ PS YL
Sbjct: 858 EGWAPSHYL 866
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 222 PEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
PEP Y I + + D +S G+ EVI K GWW ++ + G+ P+ Y+
Sbjct: 416 PEPPSVEVEYYTIAEFQSCISDGISFRGGQKAEVIDKNSGGWWYVQIGEKEGWAPASYID 475
Query: 282 KSGQ-DVSQAQRQIKR-GAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQA 339
K + ++S+ + R PP + + + SQD+ R+ +++ +
Sbjct: 476 KRKKPNLSRRTSTLTRPKVPPPAPPSKPKEAEEGPTGASESQDSPRK--LKYEEPEYDIP 533
Query: 340 RPG----PQSPGSPLEEERQTQRSKPQPAVPPRPSADLILNR 377
G P+ P+E+ +R +PA P RPS L R
Sbjct: 534 AFGFDSEPELSEEPVEDRASGER---RPAQPHRPSPASSLQR 572
Score = 38.9 bits (89), Expect = 0.008
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 198 MKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDE--VSLLEGEAVEV 255
+ A+R IP S + P P E N + YV+I Y EGDE EG ++EV
Sbjct: 1018 LPAQRNSIPVSPVRP--KPIEKSQFIHNNLKDVYVSIADY---EGDEETAGFQEGVSMEV 1072
Query: 256 IHKLLDGWWVIRKDD----VTGYFPSMYLQK 282
+ + +GWW + D G+ PS YL+K
Sbjct: 1073 LERNPNGWWYCQILDGVKPFKGWVPSNYLEK 1103
>gi|63055059 SH3 and PX domains 2B [Homo sapiens]
Length = 911
Score = 207 bits (527), Expect = 1e-53
Identities = 133/381 (34%), Positives = 196/381 (51%), Gaps = 37/381 (9%)
Query: 6 IRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAI 65
I + +L +KR VP++HYVY+ V W S + +YRR+++ ++ + + FP+E G
Sbjct: 7 IVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQK 66
Query: 66 NPENRIIPHLPAPKWFDGQR---AAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKVRP 122
+P+ RIIP LP F A R + EYC L+ LP IS+C +L FF+ RP
Sbjct: 67 DPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRP 126
Query: 123 DDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALSTGDV 182
+DL P + K ++ G T+ D P++L+ Y +ANY+K SE++LS G V
Sbjct: 127 EDLNPPKEEHIGKKKS-----GGDQTSVD---PMVLEQYVVVANYQKQESSEISLSVGQV 178
Query: 183 VEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEG 242
V+++EK+ESGWWF ++GW+PA+ LE D + +P E Y I YTA +
Sbjct: 179 VDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPE-EEEKYTVIYPYTARDQ 237
Query: 243 DEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK-SGQDVSQAQRQIKRGAPPR 301
DE++L G VEVI K L+GWW IR G+ P+ YL+K SG+ + K G P
Sbjct: 238 DEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPP-----KPG--PG 290
Query: 302 RSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQR--RRQARPGPQSPG---SPLEEERQT 356
S A + SR+ Q+A R QR R + RP P SP +R
Sbjct: 291 SPSHPGALDLDGVSRQ---QNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPKMRQRPP 347
Query: 357 QR---------SKPQPAVPPR 368
R + P+P +PP+
Sbjct: 348 PRRDMTIPRGLNLPKPPIPPQ 368
Score = 65.5 bits (158), Expect = 8e-11
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 25/225 (11%)
Query: 155 PIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLD 214
P + + Y IA ++ T ++ G VEV+EK+ SGWW+ Q++ K GW PA+F++
Sbjct: 367 PQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFIDKYK 426
Query: 215 SPDETEDPE---PNYAGEPYVAIKAYTAVEGDEVSLLEGEA---VEVIHKLLDG---W-- 263
P P + + A+E + S G + + H ++D W
Sbjct: 427 KTSNASRPNFLAPLPHEVTQLRLGEAAALENNTGSEATGPSRPLPDAPHGVMDSGLPWSK 486
Query: 264 -WVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSS-IRNAHSIHQRSRKRLSQ 321
W KD + M +++S + K PPR+ S I++ + +R R+R
Sbjct: 487 DWKGSKDVLRKASSDMSASAGYEEISDPDMEEKPSLPPRKESIIKSEGELLERERERQRT 546
Query: 322 DAYRRNSVRFLQQRRRQARPG---PQSPGSPLEEERQTQRSKPQP 363
+ R + + PG P P + R ++R +P+P
Sbjct: 547 EQLRGPTPK---------PPGVILPMMPAKHIPPARDSRRPEPKP 582
Score = 45.4 bits (106), Expect = 9e-05
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 222 PEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
P P E Y I + D +S G VEVI K L GWW I+ +D G+ P+ ++
Sbjct: 364 PIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFID 423
Query: 282 KSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRRRQARP 341
K + + ++ P H+ ++ RL + A N+ + +RP
Sbjct: 424 KYKKTSNASRPNFLAPLP------------HEVTQLRLGEAAALENNTG--SEATGPSRP 469
Query: 342 GPQSP 346
P +P
Sbjct: 470 LPDAP 474
Score = 45.4 bits (106), Expect = 9e-05
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 161 YRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQM----KAKRGWIPASFL 210
Y A+A++E + + G V EV EK+ SGWWFCQ+ + GWIP+++L
Sbjct: 855 YVAVADFEGDKDTS-SFQEGTVFEVREKNSSGWWFCQVLSGAPSWEGWIPSNYL 907
>gi|41281828 NADPH oxidase organizer 1 isoform c [Homo sapiens]
Length = 376
Score = 106 bits (265), Expect = 3e-23
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 62/376 (16%)
Query: 26 YMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDGQ- 84
+ F V+W D S+ V R + E + KTLKE FP+EAG + +R++P L D
Sbjct: 24 FAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEAGLLRRSDRVLPKLLGQASLDAPL 83
Query: 85 --RAAENRQG-----TLTEYCGTLMSLPTKISRCPHLLDFFKVRPDDLK--LPTDNQTKK 135
R +G L Y L++ +++R P + FF +P DL+ LP ++
Sbjct: 84 LGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAPQPLDLEPALPPGSRVIL 143
Query: 136 PETYLMPKDGKSTATDITGPIILQTYRAIANY--EKTSGSEMALSTGDVVEVVEKSESGW 193
P P + I + Q+ R + + + T + ++V+ + SGW
Sbjct: 144 PTPEEQPLSRAAGRLSIHS-LEAQSLRCLQPFCTQDTRDRPFQAQAQESLDVLLRHPSGW 202
Query: 194 WFCQMKAKR-GWIPASFLEPLDSPDETEDPEPNY--AGEPYVAIKAYTAVEGDEVSLLEG 250
W + + ++ W PA +LE +P + + P+ +G + A +AY + DE+S+ G
Sbjct: 203 WLVENEDRQTAWFPAPYLEEA-APGQGREGGPSLGSSGPQFCASRAYESSRADELSVPAG 261
Query: 251 EAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHS 310
V V+ GWW+ R D G P++ L+ G + + G P
Sbjct: 262 ARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGFRGGDDP---------- 311
Query: 311 IHQRSRKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPS 370
+AR P+ +Q + P P VP RPS
Sbjct: 312 -------------------------AGEARGFPE----------PSQATAPPPTVPTRPS 336
Query: 371 ADLILNRCSESTKRKL 386
I +RC T+R L
Sbjct: 337 PGAIQSRCCTVTRRAL 352
>gi|41281811 NADPH oxidase organizer 1 isoform b [Homo sapiens]
Length = 371
Score = 106 bits (265), Expect = 3e-23
Identities = 93/371 (25%), Positives = 153/371 (41%), Gaps = 57/371 (15%)
Query: 26 YMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPH-LPAPKWFDGQ 84
+ F V+W D S+ V R + E + KTLKE FP+EAG + +R++P L AP
Sbjct: 24 FAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEAGLLRRSDRVLPKLLDAPLLGRVG 83
Query: 85 RAAEN--RQGTLTEYCGTLMSLPTKISRCPHLLDFFKVRPDDLK--LPTDNQTKKPETYL 140
R + R L Y L++ +++R P + FF +P DL+ LP ++ P
Sbjct: 84 RTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAPQPLDLEPALPPGSRVILPTPEE 143
Query: 141 MPKDGKSTATDITGPIILQTYRAIANY--EKTSGSEMALSTGDVVEVVEKSESGWWFCQM 198
P + I + Q+ R + + + T + ++V+ + SGWW +
Sbjct: 144 QPLSRAAGRLSIHS-LEAQSLRCLQPFCTQDTRDRPFQAQAQESLDVLLRHPSGWWLVEN 202
Query: 199 KAKR-GWIPASFLEPLDSPDETEDPEPNY--AGEPYVAIKAYTAVEGDEVSLLEGEAVEV 255
+ ++ W PA +LE +P + + P+ +G + A +AY + DE+S+ G V V
Sbjct: 203 EDRQTAWFPAPYLEEA-APGQGREGGPSLGSSGPQFCASRAYESSRADELSVPAGARVRV 261
Query: 256 IHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRS 315
+ GWW+ R D G P++ L+ G + + G P
Sbjct: 262 LETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGFRGGDDP--------------- 306
Query: 316 RKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPSADLIL 375
+AR P+ +Q + P P VP RPS I
Sbjct: 307 --------------------AGEARGFPE----------PSQATAPPPTVPTRPSPGAIQ 336
Query: 376 NRCSESTKRKL 386
+RC T+R L
Sbjct: 337 SRCCTVTRRAL 347
>gi|21389405 NADPH oxidase organizer 1 isoform a [Homo sapiens]
Length = 370
Score = 102 bits (254), Expect = 6e-22
Identities = 93/371 (25%), Positives = 153/371 (41%), Gaps = 58/371 (15%)
Query: 26 YMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPHL-PAPKWFDGQ 84
+ F V+W D S+ V R + E + KTLKE FP+EAG + +R++P L AP
Sbjct: 24 FAFSVRWSDGSDTFVRRSWDEFRQL-KTLKETFPVEAGLLRRSDRVLPKLLDAPLLGRVG 82
Query: 85 RAAEN--RQGTLTEYCGTLMSLPTKISRCPHLLDFFKVRPDDLK--LPTDNQTKKPETYL 140
R + R L Y L++ +++R P + FF +P DL+ LP ++ P
Sbjct: 83 RTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAPQPLDLEPALPPGSRVILPTPEE 142
Query: 141 MPKDGKSTATDITGPIILQTYRAIANY--EKTSGSEMALSTGDVVEVVEKSESGWWFCQM 198
P + I + Q+ R + + + T + ++V+ + SGWW +
Sbjct: 143 QPLSRAAGRLSIHS-LEAQSLRCLQPFCTQDTRDRPFQAQAQESLDVLLRHPSGWWLVEN 201
Query: 199 KAKR-GWIPASFLEPLDSPDETEDPEPNY--AGEPYVAIKAYTAVEGDEVSLLEGEAVEV 255
+ ++ W PA +LE +P + + P+ +G + A +AY + DE+S+ G V V
Sbjct: 202 EDRQTAWFPAPYLEEA-APGQGREGGPSLGSSGPQFCASRAYESSRADELSVPAGARVRV 260
Query: 256 IHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRS 315
+ GWW+ R D G P++ L+ G + + G P
Sbjct: 261 LETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGFRGGDDP--------------- 305
Query: 316 RKRLSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPSADLIL 375
+AR P+ +Q + P P VP RPS I
Sbjct: 306 --------------------AGEARGFPE----------PSQATAPPPTVPTRPSPGAIQ 335
Query: 376 NRCSESTKRKL 386
+RC T+R L
Sbjct: 336 SRCCTVTRRAL 346
>gi|239752628 PREDICTED: hypothetical protein XP_002347816 [Homo
sapiens]
Length = 164
Score = 84.7 bits (208), Expect = 1e-16
Identities = 43/44 (97%), Positives = 43/44 (97%)
Query: 149 ATDITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKSESG 192
A DITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKSESG
Sbjct: 35 APDITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKSESG 78
Score = 31.2 bits (69), Expect = 1.7
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 12/104 (11%)
Query: 205 IPASFLEPLDSPDETEDPE----PNYAG----EPYVAIKAYTAVEGDEVSLLEGEAVEVI 256
+PA LE P P P+ G + Y AI Y G E++L G+ VEV+
Sbjct: 13 MPAPVLEAQMGPAMPTHPALPLAPDITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVV 72
Query: 257 HKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPP 300
K G + +TG P + Q Q + G P
Sbjct: 73 EKSESG----QTSHLTGLLPLVLRNPQPQAPCQGSGSLAPGRTP 112
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 73.2 bits (178), Expect = 4e-13
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPD-ETE 220
+A+ ++ + + S D++ V+E+ E+ WWF ++ RGW P S+++ + + + E
Sbjct: 877 QALCSWTAKKDNHLNFSKHDIITVLEQQEN-WWFGEVHGGRGWFPKSYVKIIPGSEVKRE 935
Query: 221 DPEPNYA-------------GEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDG-WWVI 266
+PE YA GE Y+A+ Y++VE +++ EGE + V K DG WW
Sbjct: 936 EPEALYAAVNKKPTSAAYSVGEEYIALYPYSSVEPGDLTFTEGEEILVTQK--DGEWWTG 993
Query: 267 RKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRS 315
D +G FPS Y++ Q+ + K GA ++ I S + S
Sbjct: 994 SIGDRSGIFPSNYVKPKDQESFGSAS--KSGASNKKPEIAQVTSAYVAS 1040
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 136 PETYLMPKDGKS------TATDITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKS 189
P Y+ PKD +S + P I Q A Y + +++L+ G ++ +++K+
Sbjct: 1003 PSNYVKPKDQESFGSASKSGASNKKPEIAQVTSA---YVASGSEQLSLAPGQLILILKKN 1059
Query: 190 ESGWWFCQMKAK-----RGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDE 244
SGWW +++A+ +GW PAS ++ L E P + + +A+ Y A DE
Sbjct: 1060 TSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERATPAFHPVCQ-VIAMYDYAANNEDE 1118
Query: 245 VSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
+S +G+ + V++K WW + VTG FPS Y++
Sbjct: 1119 LSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVK 1155
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 119 KVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALS 178
K++ ++ K + Q K +T + + TA+ +L YRA+ +E + EM+ +
Sbjct: 700 KIQEEERKAE-EKQRKDKDTLKAEEKKRETAS------VLVNYRALYPFEARNHDEMSFN 752
Query: 179 TGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKA 236
+GD+++V EK+ E GW + + GW P +++E + S + + P A P +
Sbjct: 753 SGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVSPKKALLPPTVSLS 812
Query: 237 YTAVEGDEVS 246
T+ + +S
Sbjct: 813 ATSTSSEPLS 822
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 73.2 bits (178), Expect = 4e-13
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPD-ETE 220
+A+ ++ + + S D++ V+E+ E+ WWF ++ RGW P S+++ + + + E
Sbjct: 904 QALCSWTAKKDNHLNFSKHDIITVLEQQEN-WWFGEVHGGRGWFPKSYVKIIPGSEVKRE 962
Query: 221 DPEPNYA-------------GEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDG-WWVI 266
+PE YA GE Y+A+ Y++VE +++ EGE + V K DG WW
Sbjct: 963 EPEALYAAVNKKPTSAAYSVGEEYIALYPYSSVEPGDLTFTEGEEILVTQK--DGEWWTG 1020
Query: 267 RKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRS 315
D +G FPS Y++ Q+ + K GA ++ I S + S
Sbjct: 1021 SIGDRSGIFPSNYVKPKDQESFGSAS--KSGASNKKPEIAQVTSAYVAS 1067
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 136 PETYLMPKDGKS------TATDITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKS 189
P Y+ PKD +S + P I Q A Y + +++L+ G ++ +++K+
Sbjct: 1030 PSNYVKPKDQESFGSASKSGASNKKPEIAQVTSA---YVASGSEQLSLAPGQLILILKKN 1086
Query: 190 ESGWWFCQMKAK-----RGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDE 244
SGWW +++A+ +GW PAS ++ L E P + + +A+ Y A DE
Sbjct: 1087 TSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERATPAFHPVCQ-VIAMYDYAANNEDE 1145
Query: 245 VSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
+S +G+ + V++K WW + VTG FPS Y++
Sbjct: 1146 LSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVK 1182
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 119 KVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALS 178
K++ ++ K + Q K +T + + TA+ +L YRA+ +E + EM+ +
Sbjct: 727 KIQEEERKAE-EKQRKDKDTLKAEEKKRETAS------VLVNYRALYPFEARNHDEMSFN 779
Query: 179 TGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKA 236
+GD+++V EK+ E GW + + GW P +++E + S + + P A P +
Sbjct: 780 SGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVSPKKALLPPTVSLS 839
Query: 237 YTAVEGDEVS 246
T+ + +S
Sbjct: 840 ATSTSSEPLS 849
>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
Length = 1249
Score = 73.2 bits (178), Expect = 4e-13
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPD-ETE 220
+A+ ++ + + S D++ V+E+ E+ WWF ++ RGW P S+++ + + + E
Sbjct: 904 QALCSWTAKKDNHLNFSKHDIITVLEQQEN-WWFGEVHGGRGWFPKSYVKIIPGSEVKRE 962
Query: 221 DPEPNYA-------------GEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDG-WWVI 266
+PE YA GE Y+A+ Y++VE +++ EGE + V K DG WW
Sbjct: 963 EPEALYAAVNKKPTSAAYSVGEEYIALYPYSSVEPGDLTFTEGEEILVTQK--DGEWWTG 1020
Query: 267 RKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRS 315
D +G FPS Y++ Q+ + K GA ++ I S + S
Sbjct: 1021 SIGDRSGIFPSNYVKPKDQESFGSAS--KSGASNKKPEIAQVTSAYVAS 1067
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 136 PETYLMPKDGKS------TATDITGPIILQTYRAIANYEKTSGSEMALSTGDVVEVVEKS 189
P Y+ PKD +S + P I Q A Y + +++L+ G ++ +++K+
Sbjct: 1030 PSNYVKPKDQESFGSASKSGASNKKPEIAQVTSA---YVASGSEQLSLAPGQLILILKKN 1086
Query: 190 ESGWWFCQMKAK-----RGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDE 244
SGWW +++A+ +GW PAS ++ L E P + + +A+ Y A DE
Sbjct: 1087 TSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERATPAFHPVCQ-VIAMYDYAANNEDE 1145
Query: 245 VSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
+S +G+ + V++K WW + VTG FPS Y++
Sbjct: 1146 LSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVK 1182
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 119 KVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALS 178
K++ ++ K + Q K +T + + TA+ +L YRA+ +E + EM+ +
Sbjct: 727 KIQEEERKAE-EKQRKDKDTLKAEEKKRETAS------VLVNYRALYPFEARNHDEMSFN 779
Query: 179 TGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKA 236
+GD+++V EK+ E GW + + GW P +++E + S + + P A P +
Sbjct: 780 SGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVSPKKALLPPTVSLS 839
Query: 237 YTAVEGDEVS 246
T+ + +S
Sbjct: 840 ATSTSSEPLS 849
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 62.8 bits (151), Expect = 5e-10
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 136 PETYLMPKDGKSTAT-DITGPIIL--QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESG 192
P Y+ KD + + T TG + + + IA+Y T ++ L+ G ++ + +K+ G
Sbjct: 1051 PSNYVRLKDSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGG 1110
Query: 193 WWFCQMKAKR-----GWIPASFLEPLD------SPDETEDPEPNYAGEPYVAIKAYTAVE 241
WW +++A+ GW PA++++ L +P E A + + YTA
Sbjct: 1111 WWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKSTALAAVCQVIGMYDYTAQN 1170
Query: 242 GDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
DE++ +G+ + V++K WW + G FPS Y++
Sbjct: 1171 DDELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVK 1210
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSP----- 216
+A+ + + + + DV+ V+E+ + WWF +++ ++GW P S+++ + P
Sbjct: 919 QALYPWRAKKDNHLNFNKNDVITVLEQQDM-WWFGEVQGQKGWFPKSYVKLISGPIRKST 977
Query: 217 ----DETEDP-----------EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLD 261
+E P +P +GE ++A+ Y + E +++ +G+ + V K D
Sbjct: 978 SMDSGSSESPASLKRVASPAAKPVVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKK--D 1035
Query: 262 G-WWVIRKDDVTGYFPSMYLQ 281
G WW D G FPS Y++
Sbjct: 1036 GDWWTGTVGDKAGVFPSNYVR 1056
Score = 53.9 bits (128), Expect = 2e-07
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 142 PKDGKSTATDITGPIIL-QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA 200
P K A+ P++ + + A+ YE + ++ GDV+ +V K + WW +
Sbjct: 987 PASLKRVASPAAKPVVSGEEFIAMYTYESSEQGDLTFQQGDVI-LVTKKDGDWWTGTVGD 1045
Query: 201 KRGWIPASFLEPLDSPDE-TEDPEPNYAGEPYVA--IKAYTAVEGDEVSLLEGEAVEVIH 257
K G P++++ DS T + +P +A I +YTA ++++L G+ + +
Sbjct: 1046 KAGVFPSNYVRLKDSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRK 1105
Query: 258 KLLDGWW-----VIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSI 305
K GWW K G+FP+ Y++ +S +I PP+ +++
Sbjct: 1106 KNPGGWWEGELQARGKKRQIGWFPANYVKL----LSPGTSKITPTEPPKSTAL 1154
Score = 43.5 bits (101), Expect = 3e-04
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 161 YRAIANYEKTSGSEMALSTGDVVEV----VEKS---ESGWWFCQMKAKRGWIPASFLEPL 213
YRA+ +E S E+ + GD+V V V++S E GW ++K K GW PA++ E +
Sbjct: 745 YRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANYAEKI 804
Query: 214 DSPDETEDPEP 224
E E P P
Sbjct: 805 ---PENEVPAP 812
Score = 33.1 bits (74), Expect = 0.44
Identities = 11/55 (20%), Positives = 29/55 (52%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE 220
+Y + E+A + G ++ V+ K + WW ++ + G P+++++ D ++
Sbjct: 1165 DYTAQNDDELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKLTTDMDPSQ 1219
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 62.8 bits (151), Expect = 5e-10
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 136 PETYLMPKDGKSTAT-DITGPIIL--QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESG 192
P Y+ KD + + T TG + + + IA+Y T ++ L+ G ++ + +K+ G
Sbjct: 1051 PSNYVRLKDSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGG 1110
Query: 193 WWFCQMKAKR-----GWIPASFLEPLD------SPDETEDPEPNYAGEPYVAIKAYTAVE 241
WW +++A+ GW PA++++ L +P E A + + YTA
Sbjct: 1111 WWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKSTALAAVCQVIGMYDYTAQN 1170
Query: 242 GDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 281
DE++ +G+ + V++K WW + G FPS Y++
Sbjct: 1171 DDELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVK 1210
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSP----- 216
+A+ + + + + DV+ V+E+ + WWF +++ ++GW P S+++ + P
Sbjct: 919 QALYPWRAKKDNHLNFNKNDVITVLEQQDM-WWFGEVQGQKGWFPKSYVKLISGPIRKST 977
Query: 217 ----DETEDP-----------EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLD 261
+E P +P +GE ++A+ Y + E +++ +G+ + V K D
Sbjct: 978 SMDSGSSESPASLKRVASPAAKPVVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKK--D 1035
Query: 262 G-WWVIRKDDVTGYFPSMYLQ 281
G WW D G FPS Y++
Sbjct: 1036 GDWWTGTVGDKAGVFPSNYVR 1056
Score = 53.9 bits (128), Expect = 2e-07
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 142 PKDGKSTATDITGPIIL-QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA 200
P K A+ P++ + + A+ YE + ++ GDV+ +V K + WW +
Sbjct: 987 PASLKRVASPAAKPVVSGEEFIAMYTYESSEQGDLTFQQGDVI-LVTKKDGDWWTGTVGD 1045
Query: 201 KRGWIPASFLEPLDSPDE-TEDPEPNYAGEPYVA--IKAYTAVEGDEVSLLEGEAVEVIH 257
K G P++++ DS T + +P +A I +YTA ++++L G+ + +
Sbjct: 1046 KAGVFPSNYVRLKDSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRK 1105
Query: 258 KLLDGWW-----VIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSI 305
K GWW K G+FP+ Y++ +S +I PP+ +++
Sbjct: 1106 KNPGGWWEGELQARGKKRQIGWFPANYVKL----LSPGTSKITPTEPPKSTAL 1154
Score = 43.5 bits (101), Expect = 3e-04
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 161 YRAIANYEKTSGSEMALSTGDVVEV----VEKS---ESGWWFCQMKAKRGWIPASFLEPL 213
YRA+ +E S E+ + GD+V V V++S E GW ++K K GW PA++ E +
Sbjct: 745 YRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANYAEKI 804
Query: 214 DSPDETEDPEP 224
E E P P
Sbjct: 805 ---PENEVPAP 812
Score = 33.1 bits (74), Expect = 0.44
Identities = 11/55 (20%), Positives = 29/55 (52%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE 220
+Y + E+A + G ++ V+ K + WW ++ + G P+++++ D ++
Sbjct: 1165 DYTAQNDDELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKLTTDMDPSQ 1219
>gi|47519798 neutrophil cytosolic factor 4 isoform 1 [Homo sapiens]
Length = 339
Score = 57.8 bits (138), Expect = 2e-08
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 15 EKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPH 74
EKR S H+V++ VK + S+ ++YRR+ + + L+E F ++ + + +P
Sbjct: 31 EKRGFTS-HFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEERFGPDSKS-SALACTLPT 88
Query: 75 LPAPKWFD-GQRAAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKVRP-DDLKLPTDNQ 132
LPA + Q AE R L Y +L+SLP + + FF P D ++P +
Sbjct: 89 LPAKVYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALR 148
Query: 133 TKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALS--TGDVVEVVEKSE 190
+P T + KS + + RA A ++ T S++ L+ GDV+ ++ +
Sbjct: 149 RLRPRT----RKVKSVSPQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRIN 204
Query: 191 SGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 222
W ++ G P SF++ L E +DP
Sbjct: 205 KDWLEGTVRGATGIFPLSFVKILKDFPEEDDP 236
>gi|163644267 neutrophil cytosolic factor 4 isoform 2 [Homo sapiens]
Length = 348
Score = 57.8 bits (138), Expect = 2e-08
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 15 EKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPH 74
EKR S H+V++ VK + S+ ++YRR+ + + L+E F ++ + + +P
Sbjct: 31 EKRGFTS-HFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEERFGPDSKS-SALACTLPT 88
Query: 75 LPAPKWFD-GQRAAENRQGTLTEYCGTLMSLPTKISRCPHLLDFFKVRP-DDLKLPTDNQ 132
LPA + Q AE R L Y +L+SLP + + FF P D ++P +
Sbjct: 89 LPAKVYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALR 148
Query: 133 TKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSGSEMALS--TGDVVEVVEKSE 190
+P T + KS + + RA A ++ T S++ L+ GDV+ ++ +
Sbjct: 149 RLRPRT----RKVKSVSPQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRIN 204
Query: 191 SGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 222
W ++ G P SF++ L E +DP
Sbjct: 205 KDWLEGTVRGATGIFPLSFVKILKDFPEEDDP 236
>gi|20149528 proline-serine-threonine phosphatase interacting
protein 1 [Homo sapiens]
Length = 416
Score = 57.0 bits (136), Expect = 3e-08
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPL 213
Q YRA+ +Y + E+ LS GD++EV+ + E GWW + +RG++P S+LE L
Sbjct: 362 QEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKL 416
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 224 PNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P + Y A+ YTA DE+ L G+ +EVI + DGWW + ++ G+ P YL+K
Sbjct: 357 PASPAQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEK 415
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 55.5 bits (132), Expect = 8e-08
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDS-------PDE 218
+Y E+ L G++VE++++ E GWW + + G P++F+E LDS PD
Sbjct: 93 SYSPEQADELKLQAGEIVEMIKEIEDGWWLGKKNGQLGAFPSNFVELLDSGPPSLGNPDM 152
Query: 219 TE----------------DPEPNYA-----GEPYVAIKAYTAVEGDEVSLLEGEAVEVIH 257
D P+Y E Y + Y DE++L G+ V+V+
Sbjct: 153 PSVSPGPQRPPKLSSLAYDSPPDYLQTVSHPEVYRVLFDYQPEAPDELALRRGDVVKVLS 212
Query: 258 KLLD--GWWVIRKDDVTGYFPSMYL 280
K + GWW G FP ++
Sbjct: 213 KTTEDKGWWEGECQGRRGVFPDNFV 237
Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 164 IANYEKTSGSEMALSTGDVVEVVEKSES-GWWFCQMKAKRGWIPASFL----EPLDSPDE 218
+A Y E++L+ GDVV V + GW + + G P + E L E
Sbjct: 6 LAGYRAQKEDELSLAPGDVVRQVRWVPARGWLRGEFGGRYGLFPERLVQEIPETLRGSGE 65
Query: 219 TEDPE-------PNYAGEPYVAIK---AYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRK 268
P P P K +Y+ + DE+ L GE VE+I ++ DGWW+ +K
Sbjct: 66 ARRPRCARRRGHPAKHPRPQRWCKVNFSYSPEQADELKLQAGEIVEMIKEIEDGWWLGKK 125
Query: 269 DDVTGYFPSMYLQ 281
+ G FPS +++
Sbjct: 126 NGQLGAFPSNFVE 138
Score = 48.9 bits (115), Expect = 8e-06
Identities = 46/211 (21%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPLDSP 216
+ YR + +Y+ + E+AL GDVV+V+ K+ + GWW + + +RG P +F+ P
Sbjct: 184 EVYRVLFDYQPEAPDELALRRGDVVKVLSKTTEDKGWWEGECQGRRGVFPDNFVLP---- 239
Query: 217 DETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFP 276
P P P + +A + L+ ++ + KL TG
Sbjct: 240 -----PPPIKKLVPRKVVSRESAPIKEPKKLMPKTSLPTVKKLATA--------TTGPSK 286
Query: 277 SMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQRR 336
+ + +D +Q+ R + P ++ S H RKR ++ SV ++
Sbjct: 287 AKTSRTPSRD---SQKLTSRDSGP-NGGFQSGGSYHP-GRKRSKTQTPQQRSVSSQEEEH 341
Query: 337 RQARPGPQSPGSPLEEERQTQRSKPQPAVPP 367
P +P+ ++ T P P P
Sbjct: 342 SSPVKAPSVKRTPMPDKTATPERPPAPENAP 372
>gi|89886447 nitric oxide synthase trafficker isoform 2 [Homo
sapiens]
Length = 506
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 113 HLLDFFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSG 172
H + K+ L +N K + G ST + + +A+ +++
Sbjct: 395 HTHSYVKISRPFLMKRLENIVSKASSGGQSNPGSSTPAPGAAQLSSRLCKALYSFQARQD 454
Query: 173 SEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDS 215
E+ L GD+V + EK E GWWF + K+G PA+++E L S
Sbjct: 455 DELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPS 497
Score = 36.6 bits (83), Expect = 0.040
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 233 AIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
A+ ++ A + DE++L +G+ V + K +GWW + G+FP+ Y+++
Sbjct: 445 ALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEE 494
>gi|16418431 nitric oxide synthase trafficker isoform 1 [Homo
sapiens]
Length = 428
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 113 HLLDFFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQTYRAIANYEKTSG 172
H + K+ L +N K + G ST + + +A+ +++
Sbjct: 317 HTHSYVKISRPFLMKRLENIVSKASSGGQSNPGSSTPAPGAAQLSSRLCKALYSFQARQD 376
Query: 173 SEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDS 215
E+ L GD+V + EK E GWWF + K+G PA+++E L S
Sbjct: 377 DELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPS 419
Score = 36.6 bits (83), Expect = 0.040
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 233 AIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
A+ ++ A + DE++L +G+ V + K +GWW + G+FP+ Y+++
Sbjct: 367 ALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEE 416
>gi|11321634 CD2-associated protein [Homo sapiens]
Length = 639
Score = 51.2 bits (121), Expect = 2e-06
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 92 GTLTEYCGTLMSLPTKISRCPHLLDFFKVRPDDLKLPT---DNQTKKPETYLM-----PK 143
G ++E ++ P KI R D FK L+ T + + KKPE L+ PK
Sbjct: 195 GNVSETASGSVTQPKKI-RGIGFGDIFKEGSVKLRTRTSSSETEEKKPEKPLILQSLGPK 253
Query: 144 DG--KSTATDITGPIILQTY-RAIANYEKTSGSEMALSTGDVVEVVEKS--ESGWWFCQM 198
+ T TD G I + Y R + YE T+ E+ G+++ ++ K E+GWW ++
Sbjct: 254 TQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLISKETGEAGWWRGEL 313
Query: 199 KAKRGWIPASFLEPL-----DSPDETEDPEPNYAGEP----YVAIKAYTAV---EGDEVS 246
K G P +F + D P + P P A P A K Y ++ E DE S
Sbjct: 314 NGKEGVFPDNFAVQINELDKDFPKPKKPPPPAKAPAPKPELIAAEKKYFSLKPEEKDEKS 373
Query: 247 LLE 249
LE
Sbjct: 374 TLE 376
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETED 221
+ + Y + E+ L GD++++ E+ E GWW + K G P++F++ L+ D+ E
Sbjct: 114 KVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVTDDGET 173
Query: 222 PEPNYAGEPYVA 233
E E +A
Sbjct: 174 HEAQDDSETVLA 185
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 39/156 (25%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEK-SESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPE- 223
+Y+ E+ + G+++ V+K E GW ++ +RG P +F++ + E +D
Sbjct: 9 DYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKRETEFKDDSL 68
Query: 224 ----------------------PNYAGEPYVAIK---------------AYTAVEGDEVS 246
P +P+ K Y DE+
Sbjct: 69 PIKRERHGNVASLVQRISTYGLPAGGIQPHPQTKNIKKKTKKRQCKVLFEYIPQNEDELE 128
Query: 247 LLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
L G+ +++ ++ +GWW ++ G FPS ++++
Sbjct: 129 LKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKE 164
Score = 33.9 bits (76), Expect = 0.26
Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 236 AYTAVEGDEVSLLEGEAVEVIHKLLD--GWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQ 293
AY DE++ EGE + +I K GWW + G FP + + ++ + +
Sbjct: 279 AYEGTNEDELTFKEGEIIHLISKETGEAGWWRGELNGKEGVFPDNFAVQI-NELDKDFPK 337
Query: 294 IKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQR-RRQARP--GPQSPGSPL 350
K+ PP ++ I +K S ++ L+Q+ + A P P+ P P
Sbjct: 338 PKKPPPPAKAPAPKPELI-AAEKKYFSLKPEEKDEKSTLEQKPSKPAAPQVPPKKPTPPT 396
Query: 351 EEERQTQRS------KPQPAVPPRP 369
+ + S +P+ VPP P
Sbjct: 397 KASNLLRSSGTVYPKRPEKPVPPPP 421
>gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo
sapiens]
Length = 492
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 261 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 320
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 321 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 380
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 381 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 423
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 340 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 399
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 400 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 459
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 460 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 491
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 436 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 492
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 259 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 311
>gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo
sapiens]
Length = 1004
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 773 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 832
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 833 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 892
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 893 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 935
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 852 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 911
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 912 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 971
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 972 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 1003
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 948 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 1004
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 771 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 823
>gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo
sapiens]
Length = 824
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 593 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 652
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 653 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 712
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 713 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 755
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 672 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 731
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 732 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 791
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 792 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 823
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 768 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 824
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 591 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 643
>gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo
sapiens]
Length = 661
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 430 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 489
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 490 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 549
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 550 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 592
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 509 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 568
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 569 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 628
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 629 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 660
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 605 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 661
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 428 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 480
>gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo
sapiens]
Length = 731
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 500 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 559
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 560 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 619
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 620 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 662
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 579 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 638
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 639 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 698
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 699 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 730
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 675 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 731
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 498 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 550
>gi|224586844 sorbin and SH3 domain containing 2 isoform 3 [Homo
sapiens]
Length = 644
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 413 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 472
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 473 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 532
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 533 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 575
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 492 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 551
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 552 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 611
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 612 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 643
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 588 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 644
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 411 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 463
>gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo
sapiens]
Length = 1100
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 869 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 928
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 929 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 988
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 989 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 1031
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 948 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 1007
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 1008 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 1067
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 1068 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 1099
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 1044 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 1100
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 867 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 919
>gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo
sapiens]
Length = 666
Score = 50.8 bits (120), Expect = 2e-06
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE- 220
+A+ +++ + E++ GD V ++ K + W+ + + G P S++E L P++ +
Sbjct: 435 KAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQP 494
Query: 221 --DPEPNYAGEPYVAIKAY--TAVEGDEVSLLEGEAVEVIHKLLDGWW--VIRKDDVTGY 274
P P GE AI Y A E+SL +G+ V ++ ++ W+ I + G
Sbjct: 495 ARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGI 554
Query: 275 FPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR 318
FP Y++ ++ A+ P SS R HS+ +R
Sbjct: 555 FPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR-IHSLSSNKPQR 597
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 166 NYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKA--KRGWIPASFLEPLD-----SPDE 218
N+ + E++L GD V ++++ + W+ ++ ++G P S++E + + D
Sbjct: 514 NFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY 573
Query: 219 TEDPEPNY--------------------------AGEPYVAIKAYTAVEGDEVSLLEGEA 252
+ P P+ GEP+ A+ YT DE+ L E +
Sbjct: 574 PDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDV 633
Query: 253 VEVIHKLLDGWWV--IRKDDVTGYFPSMYLQK 282
++V+ K DGW+V R+ G FP Y+++
Sbjct: 634 IDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 665
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 159 QTYRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKR--GWIPASFLEPL 213
+ ++A+ NY + E+ L DV++V+EK + GW+ + + G P ++++ L
Sbjct: 610 EPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL 666
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 230 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK 282
P A+ + A E+S +G+ V ++ K+ W+ G FP Y++K
Sbjct: 433 PAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEK 485
>gi|166064038 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 50.4 bits (119), Expect = 3e-06
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETED 221
RA N+++T+ E++ S GDV+ V E GWW + + GW P++++ + + ++
Sbjct: 12 RAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVS 71
Query: 222 PEPNYAGEP 230
P+ P
Sbjct: 72 PKSGTLKSP 80
Score = 33.9 bits (76), Expect = 0.26
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 243 DEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK---SGQDVSQAQRQIKRGAP 299
DE+S +G+ + V GWW + TG+FPS Y+++ S + VS +K +P
Sbjct: 23 DELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLK--SP 80
Query: 300 PR 301
P+
Sbjct: 81 PK 82
>gi|166064036 PAK-interacting exchange factor beta isoform d [Homo
sapiens]
Length = 753
Score = 50.4 bits (119), Expect = 3e-06
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETED 221
RA N+++T+ E++ S GDV+ V E GWW + + GW P++++ + + ++
Sbjct: 140 RAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVS 199
Query: 222 PEPNYAGEP 230
P+ P
Sbjct: 200 PKSGTLKSP 208
Score = 33.9 bits (76), Expect = 0.26
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 243 DEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK---SGQDVSQAQRQIKRGAP 299
DE+S +G+ + V GWW + TG+FPS Y+++ S + VS +K +P
Sbjct: 151 DELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLK--SP 208
Query: 300 PR 301
P+
Sbjct: 209 PK 210
>gi|166064034 PAK-interacting exchange factor beta isoform c [Homo
sapiens]
Length = 803
Score = 50.4 bits (119), Expect = 3e-06
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 162 RAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETED 221
RA N+++T+ E++ S GDV+ V E GWW + + GW P++++ + + ++
Sbjct: 190 RAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVS 249
Query: 222 PEPNYAGEP 230
P+ P
Sbjct: 250 PKSGTLKSP 258
Score = 33.9 bits (76), Expect = 0.26
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 243 DEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQK---SGQDVSQAQRQIKRGAP 299
DE+S +G+ + V GWW + TG+FPS Y+++ S + VS +K +P
Sbjct: 201 DELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLK--SP 258
Query: 300 PR 301
P+
Sbjct: 259 PK 260
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,372,023
Number of Sequences: 37866
Number of extensions: 810629
Number of successful extensions: 5245
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 4438
Number of HSP's gapped (non-prelim): 837
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.