Guide to the Human Genome
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Name: NOSTRIN Sequence: fasta or formatted (506aa) NCBI GI: 89886447
Description:

nitric oxide synthase trafficker isoform 2

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [428aa] nitric oxide synthase trafficker isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         35           2
 C cysteine            1.8          9           1
 D aspartate           3.8         19           2
 E glutamate           9.3         47           2
 F phenylalanine       2.4         12           1
 G glycine             3.4         17           2
 H histidine           2.0         10           1
 I isoleucine          4.2         21           2
 K lysine             11.9         60           3
 L leucine            11.3         57           2
 M methionine          2.2         11           1
 N asparagine          6.1         31           2
 P proline             2.8         14           1
 Q glutamine           5.7         29           2
 R arginine            3.8         19           2
 S serine             10.3         52           2
 T threonine           5.1         26           2
 V valine              3.0         15           1
 W tryptophan          1.4          7           2
 Y tyrosine            3.0         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nitric oxide synthase trafficker isoform 2 
NOSTRIN               0.840   nitric oxide synthase trafficker isoform 1 
ITSN2                 0.059   intersectin 2 isoform 3 
ITSN2                 0.052   intersectin 2 isoform 1 
ITSN2                 0.052   intersectin 2 isoform 2 
GAS7                  0.048   growth arrest-specific 7 isoform d 
GAS7                  0.048   growth arrest-specific 7 isoform c 
GAS7                  0.048   growth arrest-specific 7 isoform b 
GAS7                  0.048   growth arrest-specific 7 isoform a 
SH3GL1                0.045   SH3-domain GRB2-like 1 
ITSN1                 0.045   intersectin 1 isoform ITSN-s 
ITSN1                 0.045   intersectin 1 isoform ITSN-l 
CD2AP                 0.041   CD2-associated protein 
SH3GL2                0.041   SH3-domain GRB2-like 2 
SH3KBP1               0.040   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.040   SH3-domain kinase binding protein 1 isoform a 
PSTPIP2               0.038   proline-serine-threonine phosphatase interacting pr...
ARHGEF6               0.038   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
VAV1                  0.036   vav 1 guanine nucleotide exchange factor 
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform b [Homo...
ARHGEF7               0.035   PAK-interacting exchange factor beta isoform a 
SORBS3                0.035   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.035   sorbin and SH3 domain containing 3 isoform 2 
KIAA1804              0.035   mixed lineage kinase 4 
MYO1E                 0.035   myosin IE 
C1orf113              0.034   SH3 domain-containing protein C1orf113 isoform 1 [H...
SH3D19                0.034   SH3 domain containing 19 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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