Guide to the Human Genome
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Name: STAT5A Sequence: fasta or formatted (794aa) NCBI GI: 21618342
Description:

signal transducer and activator of transcription 5A

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         57           2
 C cysteine            1.3         10           2
 D aspartate           5.0         40           2
 E glutamate           6.9         55           2
 F phenylalanine       3.9         31           1
 G glycine             4.7         37           2
 H histidine           2.5         20           2
 I isoleucine          4.7         37           2
 K lysine              5.3         42           2
 L leucine            11.3         90           2
 M methionine          1.6         13           1
 N asparagine          4.5         36           2
 P proline             4.9         39           2
 Q glutamine           9.4         75           2
 R arginine            5.2         41           2
 S serine              6.0         48           3
 T threonine           4.7         37           2
 V valine              6.4         51           3
 W tryptophan          2.0         16           1
 Y tyrosine            2.4         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal transducer and activator of transcription 5A ... 
STAT5B                0.914   signal transducer and activator of transcription 5B ...
STAT6                 0.272   signal transducer and activator of transcription 6 [...
STAT3                 0.183   signal transducer and activator of transcription 3 i...
STAT3                 0.183   signal transducer and activator of transcription 3 i...
STAT3                 0.183   signal transducer and activator of transcription 3 i...
STAT4                 0.169   signal transducer and activator of transcription 4 [H...
STAT1                 0.166   signal transducer and activator of transcription 1 is...
STAT1                 0.166   signal transducer and activator of transcription 1 i...
STAT2                 0.120   signal transducer and activator of transcription 2 [H...
ZNF853                0.020   zinc finger protein 853 
GOLGB1                0.015   golgi autoantigen, golgin subfamily b, macrogolgin ...
CLIP1                 0.012   restin isoform b 
CLIP1                 0.012   restin isoform a 
RNF20                 0.012   ring finger protein 20 
CEP110                0.011   centrosomal protein 110kDa 
GOLGA6D               0.011   golgi autoantigen, golgin subfamily a, 6D 
FOXP2                 0.011   forkhead box P2 isoform I 
FOXP2                 0.011   forkhead box P2 isoform III 
FOXP2                 0.011   forkhead box P2 isoform II 
GOLGA6C               0.011   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA4                0.011   golgi autoantigen, golgin subfamily a, 4 
CENPF                 0.011   centromere protein F 
GOLGA6B               0.011   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6                0.011   golgi autoantigen, golgin subfamily a, 6 
C9orf93               0.011   hypothetical protein LOC203238 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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