Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FOXP2 Sequence: fasta or formatted (715aa) NCBI GI: 17017963
Description:

forkhead box P2 isoform I

Referenced in:

FOX Family

Other entries for this name:
alt prot [740aa] forkhead box P2 isoform II
alt prot [623aa] forkhead box P2 isoform III
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         43           2
 C cysteine            1.0          7           1
 D aspartate           3.1         22           2
 E glutamate           5.7         41           3
 F phenylalanine       1.4         10           1
 G glycine             4.2         30           2
 H histidine           3.4         24           2
 I isoleucine          3.8         27           1
 K lysine              3.5         25           2
 L leucine            10.1         72           3
 M methionine          2.7         19           2
 N asparagine          4.2         30           2
 P proline             6.2         44           2
 Q glutamine          17.8        127          40
 R arginine            3.6         26           3
 S serine             10.6         76           3
 T threonine           5.6         40           2
 V valine              5.2         37           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P2 isoform I 
FOXP2                 0.990   forkhead box P2 isoform II 
FOXP2                 0.878   forkhead box P2 isoform III 
FOXP1                 0.591   forkhead box P1 isoform 1 
FOXP4                 0.483   forkhead box P4 isoform 3 
FOXP4                 0.482   forkhead box P4 isoform 1 
FOXP4                 0.475   forkhead box P4 isoform 2 
FOXP3                 0.142   forkhead box P3 isoform b 
FOXP3                 0.142   forkhead box P3 isoform a 
ZNF853                0.073   zinc finger protein 853 
MLL2                  0.072   myeloid/lymphoid or mixed-lineage leukemia 2 
MED12                 0.069   mediator complex subunit 12 
MAML2                 0.064   mastermind-like 2 
MED15                 0.064   mediator complex subunit 15 isoform a 
MED15                 0.064   mediator complex subunit 15 isoform b 
PAXIP1                0.053   PAX interacting protein 1 
TOX3                  0.051   TOX high mobility group box family member 3 isoform...
TOX3                  0.051   TOX high mobility group box family member 3 isoform...
FOXJ1                 0.048   forkhead box J1 
TBP                   0.045   TATA box binding protein 
FOXJ3                 0.045   forkhead box J3 
FOXA3                 0.045   forkhead box A3 
FOXK2                 0.042   forkhead box K2 
BMP2K                 0.041   BMP-2 inducible kinase isoform a 
BMP2K                 0.041   BMP-2 inducible kinase isoform b 
FOXC2                 0.041   forkhead box C2 
TCHH                  0.041   trichohyalin 
FOXN2                 0.040   T-cell leukemia virus enhancer factor 
FOXN3                 0.040   checkpoint suppressor 1 isoform 1 
FOXN3                 0.040   checkpoint suppressor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press