Guide to the Human Genome
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Name: FOXP2 Sequence: fasta or formatted (740aa) NCBI GI: 149999352
Description:

forkhead box P2 isoform II

Referenced in:

Protein Composition and Structure
FOX Family

Other entries for this name:
alt prot [715aa] forkhead box P2 isoform I
alt prot [623aa] forkhead box P2 isoform III
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         44           2
 C cysteine            1.2          9           1
 D aspartate           3.1         23           2
 E glutamate           5.8         43           3
 F phenylalanine       1.5         11           1
 G glycine             4.5         33           2
 H histidine           3.6         27           2
 I isoleucine          3.8         28           1
 K lysine              3.5         26           2
 L leucine            10.1         75           3
 M methionine          2.6         19           2
 N asparagine          4.2         31           2
 P proline             6.2         46           2
 Q glutamine          17.2        127          40
 R arginine            3.5         26           3
 S serine             10.5         78           3
 T threonine           5.7         42           2
 V valine              5.0         37           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P2 isoform II 
FOXP2                 0.951   forkhead box P2 isoform I 
FOXP2                 0.844   forkhead box P2 isoform III 
FOXP1                 0.558   forkhead box P1 isoform 1 
FOXP4                 0.473   forkhead box P4 isoform 1 
FOXP4                 0.466   forkhead box P4 isoform 2 
FOXP4                 0.457   forkhead box P4 isoform 3 
FOXP3                 0.136   forkhead box P3 isoform b 
FOXP3                 0.136   forkhead box P3 isoform a 
MLL2                  0.068   myeloid/lymphoid or mixed-lineage leukemia 2 
MED12                 0.067   mediator complex subunit 12 
ZNF853                0.066   zinc finger protein 853 
MAML2                 0.065   mastermind-like 2 
MED15                 0.060   mediator complex subunit 15 isoform a 
MED15                 0.060   mediator complex subunit 15 isoform b 
PAXIP1                0.048   PAX interacting protein 1 
TOX3                  0.048   TOX high mobility group box family member 3 isoform...
TOX3                  0.048   TOX high mobility group box family member 3 isoform...
FOXJ1                 0.046   forkhead box J1 
TBP                   0.044   TATA box binding protein 
FOXJ3                 0.044   forkhead box J3 
FOXA3                 0.043   forkhead box A3 
FOXK2                 0.040   forkhead box K2 
FOXC2                 0.040   forkhead box C2 
BMP2K                 0.040   BMP-2 inducible kinase isoform a 
BMP2K                 0.040   BMP-2 inducible kinase isoform b 
TCHH                  0.040   trichohyalin 
FOXN2                 0.039   T-cell leukemia virus enhancer factor 
FOXN3                 0.038   checkpoint suppressor 1 isoform 1 
FOXN3                 0.038   checkpoint suppressor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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