Guide to the Human Genome
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Name: ZNF853 Sequence: fasta or formatted (659aa) NCBI GI: 221139761
Description:

zinc finger protein 853

Referenced in:

Protein Composition and Structure
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         45           2
 C cysteine            1.7         11           1
 D aspartate           1.4          9           1
 E glutamate          10.9         72           5
 F phenylalanine       1.1          7           1
 G glycine             6.5         43           4
 H histidine           3.0         20           2
 I isoleucine          0.8          5           1
 K lysine              1.5         10           1
 L leucine            12.7         84           4
 M methionine          0.8          5           1
 N asparagine          0.6          4           1
 P proline             6.7         44           3
 Q glutamine          26.4        174           7
 R arginine            6.4         42           5
 S serine              3.9         26           2
 T threonine           3.2         21           1
 V valine              4.9         32           3
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 853 
ZNF500                0.155   zinc finger protein 500 
ZNF551                0.133   zinc finger protein 551 
ZNF79                 0.131   zinc finger protein 79 
PRDM9                 0.131   PR domain containing 9 
LOC100287429          0.130   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.130   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.130   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.130   zinc finger protein 84 
ZNF84                 0.130   zinc finger protein 84 
ZNF16                 0.129   zinc finger protein 16 
ZNF16                 0.129   zinc finger protein 16 
ZNF436                0.129   zinc finger protein 436 
ZNF436                0.129   zinc finger protein 436 
ZNF251                0.129   zinc finger protein 251 
ZNF397                0.129   zinc finger protein 397 isoform 1 
ZNF167                0.129   zinc finger protein 167 isoform 1 
ZNF135                0.129   zinc finger protein 135 
LOC344065             0.129   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.129   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.129   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF3                  0.129   zinc finger protein 3 isoform 2 
ZNF34                 0.129   zinc finger protein 34 
ZNF483                0.128   zinc finger protein 483 isoform a 
ZNF792                0.127   zinc finger protein 792 
ZNF211                0.127   zinc finger protein 211 isoform 2 
ZNF211                0.127   zinc finger protein 211 isoform 1 
ZNF696                0.126   zinc finger protein 696 
ZNF771                0.126   zinc finger protein 771 
ZNF771                0.126   zinc finger protein 771 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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