Guide to the Human Genome
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Name: STAT6 Sequence: fasta or formatted (847aa) NCBI GI: 23397678
Description:

signal transducer and activator of transcription 6

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         50           2
 C cysteine            1.5         13           2
 D aspartate           4.0         34           1
 E glutamate           7.1         60           2
 F phenylalanine       4.1         35           1
 G glycine             7.3         62           3
 H histidine           2.5         21           1
 I isoleucine          4.0         34           2
 K lysine              4.8         41           2
 L leucine            13.0        110           3
 M methionine          2.7         23           1
 N asparagine          2.6         22           2
 P proline             7.8         66           2
 Q glutamine           7.3         62           3
 R arginine            4.5         38           2
 S serine              7.8         66           2
 T threonine           4.5         38           2
 V valine              5.5         47           2
 W tryptophan          1.5         13           1
 Y tyrosine            1.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal transducer and activator of transcription 6 [... 
STAT5B                0.254   signal transducer and activator of transcription 5B ...
STAT5A                0.254   signal transducer and activator of transcription 5A ...
STAT4                 0.108   signal transducer and activator of transcription 4 [H...
STAT3                 0.098   signal transducer and activator of transcription 3 i...
STAT3                 0.098   signal transducer and activator of transcription 3 i...
STAT3                 0.098   signal transducer and activator of transcription 3 i...
STAT1                 0.090   signal transducer and activator of transcription 1 is...
STAT1                 0.090   signal transducer and activator of transcription 1 i...
STAT2                 0.089   signal transducer and activator of transcription 2 [H...
WIPF3                 0.009   WAS/WASL interacting protein family, member 3 [Homo...
ARID1A                0.009   AT rich interactive domain 1A isoform a 
ARID1A                0.009   AT rich interactive domain 1A isoform b 
LOC729569             0.007   PREDICTED: hypothetical protein 
GPR64                 0.007   G protein-coupled receptor 64 isoform 3 
GPR64                 0.007   G protein-coupled receptor 64 isoform 2 
GPR64                 0.007   G protein-coupled receptor 64 isoform 1 
GPR64                 0.007   G protein-coupled receptor 64 isoform 4 
ARID2                 0.007   AT rich interactive domain 2 (ARID, RFX-like) 
WNK1                  0.007   WNK lysine deficient protein kinase 1 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
GLI3                  0.007   GLI-Kruppel family member GLI3 
FYCO1                 0.007   FYVE and coiled-coil domain containing 1 
YLPM1                 0.007   YLP motif containing 1 
EP300                 0.007   E1A binding protein p300 
NDC80                 0.007   kinetochore associated 2 
RUSC1                 0.006   RUN and SH3 domain containing 1 isoform b 
RUSC1                 0.006   RUN and SH3 domain containing 1 isoform a 
FLJ22184              0.006   PREDICTED: hypothetical protein FLJ22184 
TRERF1                0.006   transcriptional regulating factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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