Guide to the Human Genome
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Name: STAT5B Sequence: fasta or formatted (787aa) NCBI GI: 21618344
Description:

signal transducer and activator of transcription 5B

Referenced in:

Growth Hormone and Related Hormones
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         55           2
 C cysteine            1.1          9           2
 D aspartate           5.0         39           2
 E glutamate           7.1         56           2
 F phenylalanine       3.8         30           1
 G glycine             5.0         39           3
 H histidine           2.4         19           1
 I isoleucine          4.8         38           2
 K lysine              5.2         41           2
 L leucine            10.7         84           2
 M methionine          2.0         16           1
 N asparagine          5.0         39           2
 P proline             4.7         37           2
 Q glutamine           9.5         75           2
 R arginine            4.8         38           2
 S serine              6.0         47           3
 T threonine           4.8         38           2
 V valine              6.4         50           3
 W tryptophan          2.0         16           1
 Y tyrosine            2.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal transducer and activator of transcription 5B ... 
STAT5A                0.921   signal transducer and activator of transcription 5A ...
STAT6                 0.274   signal transducer and activator of transcription 6 [...
STAT3                 0.186   signal transducer and activator of transcription 3 i...
STAT3                 0.186   signal transducer and activator of transcription 3 i...
STAT3                 0.186   signal transducer and activator of transcription 3 i...
STAT4                 0.182   signal transducer and activator of transcription 4 [H...
STAT1                 0.175   signal transducer and activator of transcription 1 is...
STAT1                 0.175   signal transducer and activator of transcription 1 i...
STAT2                 0.125   signal transducer and activator of transcription 2 [H...
ZNF853                0.019   zinc finger protein 853 
GOLGB1                0.014   golgi autoantigen, golgin subfamily b, macrogolgin ...
RNF20                 0.011   ring finger protein 20 
GOLGA4                0.010   golgi autoantigen, golgin subfamily a, 4 
LOC400352             0.010   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.010   PREDICTED: similar to Putative golgin subfamily A m...
CEP135                0.010   centrosome protein 4 
CEP110                0.010   centrosomal protein 110kDa 
GOLGA6                0.010   golgi autoantigen, golgin subfamily a, 6 
C9orf93               0.010   hypothetical protein LOC203238 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.010   GRB10 interacting GYF protein 2 isoform b 
DST                   0.010   dystonin isoform 1e precursor 
PCNT                  0.010   pericentrin 
CEP250                0.009   centrosomal protein 2 
BZRAP1                0.009   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.009   peripheral benzodiazepine receptor-associated prote...
EVI5L                 0.009   ecotropic viral integration site 5-like isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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