COL9A2 1370

Name: COL9A2	Sequence: fasta or formatted (689aa)		NCBI GI: 11386161
Description: alpha 2 type IX collagen		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 42 3 C cysteine 0.6 4 1 D aspartate 3.5 24 1 E glutamate 4.5 31 2 F phenylalanine 0.6 4 1 G glycine 29.5 203 2 H histidine 1.2 8 1 I isoleucine 3.3 23 1 K lysine 5.5 38 1 L leucine 4.1 28 2 M methionine 1.6 11 2 N asparagine 0.9 6 1 P proline 20.0 138 2 Q glutamine 4.9 34 2 R arginine 3.9 27 1 S serine 2.6 18 1 T threonine 2.2 15 1 V valine 4.2 29 3 W tryptophan 0.0 0 0 Y tyrosine 0.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 2 type IX collagen COL9A1 0.512 alpha 1 type IX collagen isoform 2 precursor COL9A1 0.507 alpha 1 type IX collagen isoform 1 precursor COL9A3 0.441 alpha 3 type IX collagen LOC100293055 0.373 PREDICTED: similar to COL22A1 protein COL22A1 0.371 collagen, type XXII, alpha 1 COL5A1 0.361 alpha 1 type V collagen preproprotein COL4A5 0.356 type IV collagen alpha 5 isoform 2 precursor COL5A2 0.356 alpha 2 type V collagen preproprotein COL4A5 0.354 type IV collagen alpha 5 isoform 3 precursor COL1A1 0.354 alpha 1 type I collagen preproprotein COL4A5 0.352 type IV collagen alpha 5 isoform 1 precursor COL3A1 0.350 collagen type III alpha 1 preproprotein COL5A3 0.350 collagen, type V, alpha 3 preproprotein COL11A1 0.350 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.350 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.350 alpha 1 type XI collagen isoform A preproprotein [Ho... COL2A1 0.348 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.348 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL27A1 0.341 collagen, type XXVII, alpha 1 COL4A1 0.339 alpha 1 type IV collagen preproprotein COL1A2 0.335 alpha 2 type I collagen COL11A2 0.334 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.334 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.334 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL16A1 0.330 alpha 1 type XVI collagen precursor COL4A4 0.328 alpha 4 type IV collagen precursor COL7A1 0.327 alpha 1 type VII collagen precursor COL24A1 0.324 collagen, type XXIV, alpha 1 COL4A3 0.322 alpha 3 type IV collagen isoform 5 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.