COL9A1 35359

Name: COL9A1	Sequence: fasta or formatted (921aa)		NCBI GI: 73486666
Description: alpha 1 type IX collagen isoform 1 precursor		Referenced in: Collagen
Other entries for this name: alt prot [678aa] alpha 1 type IX collagen isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 47 2 C cysteine 1.2 11 1 D aspartate 4.2 39 2 E glutamate 5.1 47 2 F phenylalanine 2.4 22 3 G glycine 23.6 217 2 H histidine 0.9 8 1 I isoleucine 3.9 36 1 K lysine 4.6 42 2 L leucine 6.2 57 1 M methionine 1.3 12 1 N asparagine 2.2 20 2 P proline 16.6 153 2 Q glutamine 4.2 39 2 R arginine 5.9 54 2 S serine 4.6 42 2 T threonine 2.8 26 2 V valine 4.0 37 2 W tryptophan 0.7 6 1 Y tyrosine 0.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.720 alpha 1 type IX collagen isoform 2 precursor COL9A2 0.383 alpha 2 type IX collagen COL9A3 0.329 alpha 3 type IX collagen COL22A1 0.304 collagen, type XXII, alpha 1 COL4A5 0.275 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.275 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.274 type IV collagen alpha 5 isoform 2 precursor LOC100293055 0.271 PREDICTED: similar to COL22A1 protein COL3A1 0.269 collagen type III alpha 1 preproprotein COL11A2 0.269 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL19A1 0.269 alpha 1 type XIX collagen precursor COL1A1 0.265 alpha 1 type I collagen preproprotein COL11A2 0.265 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL5A2 0.263 alpha 2 type V collagen preproprotein COL2A1 0.263 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.263 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.261 alpha 1 type V collagen preproprotein COL27A1 0.260 collagen, type XXVII, alpha 1 COL4A1 0.256 alpha 1 type IV collagen preproprotein COL5A3 0.256 collagen, type V, alpha 3 preproprotein COL7A1 0.253 alpha 1 type VII collagen precursor COL11A1 0.253 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.253 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.253 alpha 1 type XI collagen isoform A preproprotein [Ho... COL16A1 0.253 alpha 1 type XVI collagen precursor COL11A2 0.253 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL4A3 0.251 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.251 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.251 alpha 3 type IV collagen isoform 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.