Guide to the Human Genome
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Name: RNF141 Sequence: fasta or formatted (230aa) NCBI GI: 21361493
Description:

ring finger protein 141

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         17           2
 C cysteine            4.3         10           2
 D aspartate           6.1         14           2
 E glutamate           7.4         17           3
 F phenylalanine       2.2          5           1
 G glycine             4.8         11           1
 H histidine           2.2          5           1
 I isoleucine          5.2         12           1
 K lysine              5.2         12           1
 L leucine             7.4         17           2
 M methionine          3.0          7           1
 N asparagine          3.9          9           1
 P proline             3.5          8           1
 Q glutamine           6.5         15           2
 R arginine            4.3         10           1
 S serine             10.0         23           3
 T threonine           4.8         11           1
 V valine              8.3         19           3
 W tryptophan          1.7          4           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 141 
RNF149                0.059   ring finger protein 149 
RNF8                  0.056   ring finger protein 8 isoform 1 
RNFT2                 0.056   transmembrane protein 118 isoform 1 
RNF150                0.052   ring finger protein 150 
RNF130                0.052   ring finger protein 130 
RNF38                 0.052   ring finger protein 38 isoform 2 
RNF38                 0.052   ring finger protein 38 isoform 2 
RNF38                 0.052   ring finger protein 38 isoform 3 
RNF38                 0.052   ring finger protein 38 isoform 2 
RNF38                 0.052   ring finger protein 38 isoform 1 
RNF126                0.052   ring finger protein 126 
ZNRF3                 0.050   zinc and ring finger 3 
RNF111                0.050   ring finger protein 111 
RNF165                0.050   ring finger protein 165 
ZNRF4                 0.050   zinc and ring finger 4 
DZIP3                 0.047   DAZ interacting protein 3, zinc finger 
RNFT1                 0.047   PTD016 protein 
RNF24                 0.047   ring finger protein 24 isoform 2 
RNF24                 0.047   ring finger protein 24 isoform 1 
RNF24                 0.047   ring finger protein 24 isoform 1 
RNF44                 0.047   ring finger protein 44 
RNF43                 0.045   ring finger protein 43 
CHFR                  0.045   checkpoint with forkhead and ring finger domains is...
CHFR                  0.045   checkpoint with forkhead and ring finger domains is...
CHFR                  0.045   checkpoint with forkhead and ring finger domains is...
CHFR                  0.045   checkpoint with forkhead and ring finger domains is...
CHFR                  0.045   checkpoint with forkhead and ring finger domains is...
AMFR                  0.045   autocrine motility factor receptor 
TOPORS                0.045   topoisomerase I binding, arginine/serine-rich 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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