Guide to the Human Genome
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Name: RNF111 Sequence: fasta or formatted (986aa) NCBI GI: 37595553
Description:

ring finger protein 111

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         66           5
 C cysteine            2.3         23           2
 D aspartate           3.5         35           2
 E glutamate           6.5         64           2
 F phenylalanine       1.7         17           1
 G glycine             5.2         51           2
 H histidine           7.2         71           7
 I isoleucine          3.4         34           1
 K lysine              3.2         32           2
 L leucine             5.9         58           2
 M methionine          1.9         19           2
 N asparagine          3.2         32           2
 P proline             9.9         98           4
 Q glutamine           6.1         60           2
 R arginine            5.7         56           3
 S serine             13.8        136           6
 T threonine           6.0         59           2
 V valine              5.4         53           3
 W tryptophan          0.5          5           1
 Y tyrosine            1.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 111 
RNF165                0.116   ring finger protein 165 
C18orf25              0.047   ARKadia-like 1 isoform b 
C18orf25              0.037   ARKadia-like 1 isoform a 
RERE                  0.026   atrophin-1 like protein isoform b 
RERE                  0.026   atrophin-1 like protein isoform a 
RERE                  0.026   atrophin-1 like protein isoform a 
RNF38                 0.025   ring finger protein 38 isoform 2 
RNF38                 0.025   ring finger protein 38 isoform 2 
RNF38                 0.025   ring finger protein 38 isoform 3 
RNF38                 0.025   ring finger protein 38 isoform 2 
RNF38                 0.025   ring finger protein 38 isoform 1 
MLL5                  0.024   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.024   myeloid/lymphoid or mixed-lineage leukemia 5 
RNF44                 0.023   ring finger protein 44 
RNF149                0.022   ring finger protein 149 
BRD4                  0.021   bromodomain-containing protein 4 isoform long 
RBM33                 0.021   RNA binding motif protein 33 
SYNJ1                 0.019   synaptojanin 1 isoform c 
RNF150                0.018   ring finger protein 150 
RLIM                  0.018   ring finger protein, LIM domain interacting 
RLIM                  0.018   ring finger protein, LIM domain interacting 
ATN1                  0.018   atrophin-1 
ATN1                  0.018   atrophin-1 
DSPP                  0.017   dentin sialophosphoprotein preproprotein 
CBLL1                 0.017   Cas-Br-M (murine) ecotropic retroviral transforming...
RNF11                 0.017   ring finger protein 11 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC729792             0.017   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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