RNFT1 344

Name: RNFT1	Sequence: fasta or formatted (435aa)		NCBI GI: 109134327
Description: PTD016 protein		Referenced in: Ring Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 19 2 C cysteine 3.7 16 1 D aspartate 2.8 12 2 E glutamate 4.6 20 2 F phenylalanine 6.4 28 3 G glycine 5.7 25 1 H histidine 4.1 18 1 I isoleucine 6.9 30 1 K lysine 4.4 19 2 L leucine 12.4 54 2 M methionine 1.8 8 1 N asparagine 2.3 10 1 P proline 4.4 19 2 Q glutamine 4.1 18 1 R arginine 5.3 23 2 S serine 11.0 48 3 T threonine 5.1 22 2 V valine 4.6 20 1 W tryptophan 2.1 9 1 Y tyrosine 3.9 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PTD016 protein RNFT2 0.332 transmembrane protein 118 isoform 1 RNFT2 0.252 transmembrane protein 118 isoform 2 RNF151 0.038 ring finger protein 151 RNF41 0.031 ring finger protein 41 isoform 1 RNF41 0.031 ring finger protein 41 isoform 1 PEX10 0.030 peroxisome biogenesis factor 10 isoform 1 PEX10 0.030 peroxisome biogenesis factor 10 isoform 2 AMFR 0.026 autocrine motility factor receptor RNF145 0.026 ring finger protein 145 RNF219 0.025 ring finger protein 219 SYVN1 0.025 synoviolin 1 isoform b SYVN1 0.025 synoviolin 1 isoform a RNF213 0.025 ring finger protein 213 RNF141 0.024 ring finger protein 141 RNF139 0.024 ring finger protein 139 TRIM39 0.024 tripartite motif-containing 39 isoform 2 TRIM39 0.024 tripartite motif-containing 39 isoform 1 TRIM65 0.024 tripartite motif-containing 65 TRIM62 0.023 tripartite motif-containing 62 TRIM77 0.022 PREDICTED: tripartite motif-containing 77 TRIM77 0.022 PREDICTED: tripartite motif-containing 77 LOC100289112 0.022 PREDICTED: hypothetical protein XP_002343148 RNF8 0.022 ring finger protein 8 isoform 1 TRIM77 0.022 tripartite motif-containing 77 LONRF1 0.022 LON peptidase N-terminal domain and ring finger 1 [H... RNF32 0.021 ring finger protein 32 LONRF3 0.019 LON peptidase N-terminal domain and ring finger 3 is... LONRF3 0.019 LON peptidase N-terminal domain and ring finger 3 is... RNF113A 0.019 ring finger protein 113A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.