Guide to the Human Genome
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Name: DZIP3 Sequence: fasta or formatted (1208aa) NCBI GI: 7662244
Description:

DAZ interacting protein 3, zinc finger

Referenced in:

Ring Finger Proteins
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         57           2
 C cysteine            2.2         27           2
 D aspartate           5.0         61           2
 E glutamate           8.4        101           7
 F phenylalanine       3.7         45           2
 G glycine             3.9         47           2
 H histidine           2.3         28           1
 I isoleucine          6.4         77           4
 K lysine              8.7        105           4
 L leucine            10.8        131           3
 M methionine          2.5         30           2
 N asparagine          5.0         61           2
 P proline             6.0         73           5
 Q glutamine           6.1         74           2
 R arginine            4.1         49           2
 S serine              6.9         83           2
 T threonine           4.5         54           2
 V valine              4.8         58           2
 W tryptophan          1.2         14           1
 Y tyrosine            2.7         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DAZ interacting protein 3, zinc finger 
RNF214                0.040   ring finger protein 214 
RNF214                0.040   ring finger protein 214 
TTC3                  0.040   tetratricopeptide repeat domain 3 
TTC3                  0.040   tetratricopeptide repeat domain 3 
SYVN1                 0.015   synoviolin 1 isoform b 
SYVN1                 0.015   synoviolin 1 isoform a 
ZNRF3                 0.014   zinc and ring finger 3 
RNF150                0.014   ring finger protein 150 
RNF44                 0.014   ring finger protein 44 
MYH15                 0.014   myosin, heavy polypeptide 15 
RNF149                0.013   ring finger protein 149 
RNF133                0.013   ring finger protein 133 
RNF38                 0.013   ring finger protein 38 isoform 2 
RNF38                 0.013   ring finger protein 38 isoform 2 
RNF38                 0.013   ring finger protein 38 isoform 3 
RNF38                 0.013   ring finger protein 38 isoform 2 
RNF38                 0.013   ring finger protein 38 isoform 1 
RNF215                0.013   ring finger protein 215 
RNF145                0.013   ring finger protein 145 
RNF148                0.012   ring finger protein 148 
FAM184A               0.012   hypothetical protein LOC79632 isoform 2 
FAM184A               0.012   hypothetical protein LOC79632 isoform 1 
RNF130                0.012   ring finger protein 130 
PPFIA1                0.012   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.012   PTPRF interacting protein alpha 1 isoform b 
AMFR                  0.012   autocrine motility factor receptor 
LOC100290625          0.011   PREDICTED: hypothetical protein XP_002347002 
LOC100289630          0.011   PREDICTED: hypothetical protein XP_002342853 
RNF165                0.011   ring finger protein 165 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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