Guide to the Human Genome
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Name: ZNRF4 Sequence: fasta or formatted (429aa) NCBI GI: 150170725
Description:

zinc and ring finger 4

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         42           2
 C cysteine            4.9         21           2
 D aspartate           4.7         20           2
 E glutamate           4.0         17           2
 F phenylalanine       2.6         11           2
 G glycine             4.4         19           1
 H histidine           4.2         18           1
 I isoleucine          3.3         14           1
 K lysine              2.6         11           1
 L leucine            11.0         47           3
 M methionine          1.2          5           1
 N asparagine          1.9          8           1
 P proline            10.0         43           3
 Q glutamine           3.7         16           1
 R arginine            7.2         31           2
 S serine              8.4         36           3
 T threonine           4.7         20           2
 V valine              8.4         36           2
 W tryptophan          1.6          7           1
 Y tyrosine            1.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc and ring finger 4 
RNF167                0.227   ring finger protein 167 
RNF13                 0.218   ring finger protein 13 
RNF13                 0.218   ring finger protein 13 
RNF130                0.056   ring finger protein 130 
RNF148                0.054   ring finger protein 148 
RNF150                0.051   ring finger protein 150 
RNF133                0.051   ring finger protein 133 
RNF149                0.048   ring finger protein 149 
RNF43                 0.046   ring finger protein 43 
RLIM                  0.045   ring finger protein, LIM domain interacting 
RLIM                  0.045   ring finger protein, LIM domain interacting 
ZNRF3                 0.044   zinc and ring finger 3 
RNF128                0.043   ring finger protein 128 isoform 2 
RNF128                0.041   ring finger protein 128 isoform 1 
RNF126                0.037   ring finger protein 126 
RNF6                  0.037   ring finger protein 6 
RNF6                  0.037   ring finger protein 6 
RNF6                  0.037   ring finger protein 6 
RNF38                 0.036   ring finger protein 38 isoform 2 
RNF38                 0.036   ring finger protein 38 isoform 2 
RNF38                 0.036   ring finger protein 38 isoform 3 
RNF38                 0.036   ring finger protein 38 isoform 2 
RNF38                 0.036   ring finger protein 38 isoform 1 
RNF44                 0.035   ring finger protein 44 
RNF24                 0.035   ring finger protein 24 isoform 2 
RNF24                 0.035   ring finger protein 24 isoform 1 
RNF24                 0.035   ring finger protein 24 isoform 1 
RNF215                0.035   ring finger protein 215 
RNF122                0.035   ring finger protein 122 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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