Search of human proteins with 19923665

Search of human proteins with 19923665

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19923665 BRI3-binding protein [Homo sapiens]
         (251 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19923665 BRI3-binding protein [Homo sapiens]                       494   e-140
gi|13129092 transmembrane protein 109 [Homo sapiens]                   51   8e-07
gi|227430327 calsequestrin 1 [Homo sapiens]                            39   0.006
gi|117414150 transmembrane 7 superfamily member 2 [Homo sapiens]       32   0.40 
gi|194328809 latent transforming growth factor beta binding prot...    32   0.68 
gi|18497288 latent transforming growth factor beta binding prote...    32   0.68 
gi|150170672 thrombospondin, type I, domain containing 7A [Homo ...    31   1.2  
gi|187960059 syndecan 3 [Homo sapiens]                                 30   1.5  
gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer...    30   2.0  
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot...    30   2.0  
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       30   2.6  
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]       30   2.6  
gi|33942072 trinucleotide repeat containing 5 [Homo sapiens]           30   2.6  
gi|117606362 anterior pharynx defective 1 homolog A isoform 1 [H...    29   3.4  
gi|117606357 anterior pharynx defective 1 homolog A isoform 2 [H...    29   3.4  
gi|39930569 abhydrolase domain containing 15 [Homo sapiens]            29   3.4  
gi|14211919 solute carrier family 9, member 7 [Homo sapiens]           29   3.4  
gi|27436988 potassium voltage-gated channel, subfamily G, member...    29   3.4  
gi|4504237 semaphorin 7A isoform 1 preproprotein [Homo sapiens]        29   4.4  
gi|225637520 semaphorin 7A isoform 2 preproprotein [Homo sapiens]      29   4.4  
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    29   4.4  
gi|168229159 bone marrow stromal cell antigen 1 precursor [Homo ...    29   4.4  
gi|16933557 dachsous 1 precursor [Homo sapiens]                        29   4.4  
gi|5032013 kinesin family member 20A [Homo sapiens]                    28   5.8  
gi|112734867 retinitis pigmentosa GTPase regulator interacting p...    28   5.8  
gi|59709427 XK, Kell blood group complex subunit-related family,...    28   5.8  
gi|226371777 sex hormone-binding globulin isoform 3 precursor [H...    28   7.6  
gi|226371775 sex hormone-binding globulin isoform 2 precursor [H...    28   7.6  
gi|7382460 sex hormone-binding globulin isoform 1 precursor [Hom...    28   7.6  
gi|226371613 sex hormone-binding globulin isoform 4 precursor [H...    28   7.6  

>gi|19923665 BRI3-binding protein [Homo sapiens]
          Length = 251

 Score =  494 bits (1273), Expect = e-140
 Identities = 251/251 (100%), Positives = 251/251 (100%)

Query: 1   MGARASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSL 60
           MGARASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSL
Sbjct: 1   MGARASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSL 60

Query: 61  FGEDNVRAAQKFLARLTERFVLGVDMFVETLWKVWTELLDVLGLDVSNLSQYFSPASVSS 120
           FGEDNVRAAQKFLARLTERFVLGVDMFVETLWKVWTELLDVLGLDVSNLSQYFSPASVSS
Sbjct: 61  FGEDNVRAAQKFLARLTERFVLGVDMFVETLWKVWTELLDVLGLDVSNLSQYFSPASVSS 120

Query: 121 SPARALLLVGVVLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCVYILHKYEGE 180
           SPARALLLVGVVLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCVYILHKYEGE
Sbjct: 121 SPARALLLVGVVLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCVYILHKYEGE 180

Query: 181 PENAVLPLCFVVAVYFMTGPMGFYWRSSPSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNR 240
           PENAVLPLCFVVAVYFMTGPMGFYWRSSPSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNR
Sbjct: 181 PENAVLPLCFVVAVYFMTGPMGFYWRSSPSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNR 240

Query: 241 VLESLDRSKDK 251
           VLESLDRSKDK
Sbjct: 241 VLESLDRSKDK 251


>gi|13129092 transmembrane protein 109 [Homo sapiens]
          Length = 243

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 22/239 (9%)

Query: 7   GGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSV----SSLFG 62
           G  + +A L++L+ L+LL   LA   +     G  ++ +    +    +SV     +  G
Sbjct: 11  GKHVFKAILMVLVALILLHSALAQSRRDFAPPGQQKREAPVDVLTQIGRSVRGTLDAWIG 70

Query: 63  EDNVRAAQKFLARLTERFVLGVDMFVETLWKVWTELLDVLGLDVSNLSQYFSPASVSSSP 122
            + +    +  +++       + +    L  +  +LL+ LGL    L+Q      +S   
Sbjct: 71  PETMHLVSESSSQVLWAISSAISVAFFALSGIAAQLLNALGLAGDYLAQGLK---LSPGQ 127

Query: 123 ARALLLVGV-VLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCVYILHKYEGEP 181
            +  LL G   L+ YW LSL LG   ++L    GR  W +++V+F    V ++       
Sbjct: 128 VQTFLLWGAGALVVYWLLSLLLGLVLALL----GRILWGLKLVIFLAGFVALMRSVPDPS 183

Query: 182 ENAVLPLCFVVAVYFMTGPMGFYWRSSPSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNR 240
             A+L L  ++    ++   G          S  S   +E K+  LE+QV  L  R  R
Sbjct: 184 TRALLLLALLILYALLSRLTG----------SRASGAQLEAKVRGLERQVEELRWRQRR 232


>gi|227430327 calsequestrin 1 [Homo sapiens]
          Length = 396

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/68 (36%), Positives = 34/68 (50%)

Query: 1  MGARASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSL 60
          M A    GP A  GL L LLLLL+LG    G QG  G    E +   R +N  +++  ++
Sbjct: 1  MSATDRMGPRAVPGLRLALLLLLVLGTPKSGVQGQEGLDFPEYDGVDRVINVNAKNYKNV 60

Query: 61 FGEDNVRA 68
          F +  V A
Sbjct: 61 FKKYEVLA 68


>gi|117414150 transmembrane 7 superfamily member 2 [Homo sapiens]
          Length = 418

 Score = 32.3 bits (72), Expect = 0.40
 Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 20/133 (15%)

Query: 101 VLGLDVSNLSQYFSPASVSSSPARALLLVGVVLLAY-----WFLSLTLGFTFSVLH---- 151
           ++G  + NL+     A +  SP+ A+ LV    L Y     W     L  T  + H    
Sbjct: 198 LIGWVLINLALLMKEAELRGSPSLAMWLVNGFQLLYVGDALWHEEAVL-TTMDITHDGFG 256

Query: 152 --VVFGRFFWIVRVVLFSMSCVYILHKYEGEPENAVLPLCFVVAVYFMTGPMGFYWRSSP 209
             + FG   W+     +S+   ++LH     P+   LP+  V+ +   TG   F   +S 
Sbjct: 257 FMLAFGDMAWV--PFTYSLQAQFLLH----HPQPLGLPMASVICLINATGYYIFRGANSQ 310

Query: 210 SGP--SNPSNPSV 220
                 NPS+P V
Sbjct: 311 KNTFRKNPSDPRV 323


>gi|194328809 latent transforming growth factor beta binding
          protein 3 isoform 1 [Homo sapiens]
          Length = 1303

 Score = 31.6 bits (70), Expect = 0.68
 Identities = 26/51 (50%), Positives = 28/51 (54%), Gaps = 12/51 (23%)

Query: 2  GARASGGPLA-------RAGLL--LLLLLLLLLGL---LAPGAQGARGRGG 40
          G R + G LA        AGLL  LLLLLLLLLGL   +  G  G RG GG
Sbjct: 3  GPRGAAGGLAPEMRGAGAAGLLALLLLLLLLLLGLGGRVEGGPAGERGAGG 53


>gi|18497288 latent transforming growth factor beta binding
          protein 3 isoform 2 [Homo sapiens]
          Length = 1256

 Score = 31.6 bits (70), Expect = 0.68
 Identities = 26/51 (50%), Positives = 28/51 (54%), Gaps = 12/51 (23%)

Query: 2  GARASGGPLA-------RAGLL--LLLLLLLLLGL---LAPGAQGARGRGG 40
          G R + G LA        AGLL  LLLLLLLLLGL   +  G  G RG GG
Sbjct: 3  GPRGAAGGLAPEMRGAGAAGLLALLLLLLLLLLGLGGRVEGGPAGERGAGG 53


>gi|150170672 thrombospondin, type I, domain containing 7A [Homo
          sapiens]
          Length = 1657

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 7/46 (15%)

Query: 2  GARASGGPLARAGLLLLLLL-----LLLLGLLAPGAQGARGRGGAE 42
          G+R + GP  R G+L LL L     LLLL LL PGA  A  +G AE
Sbjct: 11 GSRGAAGP--RRGVLQLLPLPLPLPLLLLLLLRPGAGRAAAQGEAE 54


>gi|187960059 syndecan 3 [Homo sapiens]
          Length = 442

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 21/32 (65%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 2  GARASGGPLARAGLLLLLLLLLLLGLLAPGAQ 33
          GA A+ GP AR GLLL  LLLLLL   A GAQ
Sbjct: 18 GAGAAAGPGAR-GLLLPPLLLLLLAGRAAGAQ 48


>gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase
           2 [Homo sapiens]
          Length = 530

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 22/96 (22%)

Query: 3   ARASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSLFG 62
           A     P A AG+          G+ AP   G RG GG         V T  +S SS FG
Sbjct: 131 AAVGAAPAAAAGMA---------GVAAPPGNGTRGTGGVGDKRQLVYVFTTWRSGSSFFG 181

Query: 63  EDNVRAAQKFLARLTERFVLGVDMFVETLWKVWTEL 98
           E           +  E F L      E +W VW +L
Sbjct: 182 E--------LFNQNPEVFFL-----YEPVWHVWQKL 204


>gi|38683827 ADAM metallopeptidase with thrombospondin type 1
          motif, 7 preproprotein [Homo sapiens]
          Length = 1686

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 20/33 (60%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 7  GGPLARAGLLLLLLLLLLLGLLAPGAQG-ARGR 38
          GGP  R+   LL  LLLLL  LAPGA G A GR
Sbjct: 3  GGPSPRSPAPLLRPLLLLLCALAPGAPGPAPGR 35


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 208 SPSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNRVLESLDRSKD 250
           SP+G S        +KL+ L K +  L   +N++ ++ DR KD
Sbjct: 520 SPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKD 562


>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
          Length = 748

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 208 SPSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNRVLESLDRSKD 250
           SP+G S        +KL+ L K +  L   +N++ ++ DR KD
Sbjct: 480 SPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKD 522


>gi|33942072 trinucleotide repeat containing 5 [Homo sapiens]
          Length = 278

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 17/33 (51%), Positives = 21/33 (63%)

Query: 16 LLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRR 48
          LLLL LLLLL LL P  +    + GAE+N + R
Sbjct: 12 LLLLPLLLLLLLLLPAPELGPSQAGAEENDWVR 44


>gi|117606362 anterior pharynx defective 1 homolog A isoform 1 [Homo
           sapiens]
          Length = 265

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)

Query: 112 YFSPASVSSSPARALLLVGVVLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCV 171
           +F    V+  PA AL L+ V            G    V+ +V G FFW+V ++L S+   
Sbjct: 6   FFGCTFVAFGPAFALFLITVA-----------GDPLRVIILVAGAFFWLVSLLLASVVWF 54

Query: 172 YILH 175
            ++H
Sbjct: 55  ILVH 58


>gi|117606357 anterior pharynx defective 1 homolog A isoform 2 [Homo
           sapiens]
          Length = 247

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)

Query: 112 YFSPASVSSSPARALLLVGVVLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCV 171
           +F    V+  PA AL L+ V            G    V+ +V G FFW+V ++L S+   
Sbjct: 6   FFGCTFVAFGPAFALFLITVA-----------GDPLRVIILVAGAFFWLVSLLLASVVWF 54

Query: 172 YILH 175
            ++H
Sbjct: 55  ILVH 58


>gi|39930569 abhydrolase domain containing 15 [Homo sapiens]
          Length = 468

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 13 AGLLLLLLLLLLLGLLAPGAQGARGRGGAEK 43
          A L L+L +L LLGLL P  +G  GR   E+
Sbjct: 6  AALALILAVLALLGLLGPRLRGPWGRAVGER 36


>gi|14211919 solute carrier family 9, member 7 [Homo sapiens]
          Length = 725

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 21/123 (17%)

Query: 4   RASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSLFGE 63
           RA+G P  R   LLLL LLL  GL    A  A   G A ++S     +   +  +    E
Sbjct: 13  RATGAPPPR---LLLLPLLLGWGLRVAAAASASSSGAAAEDS-----SAMEELATEKEAE 64

Query: 64  DNVRAAQKFLARLTERFVLGVDMFVETLWKV---------WTELLDVLGLDVSNLSQYFS 114
           ++ R  Q  ++ LT  F+L + + + T+W            T L  + GL V  + +Y +
Sbjct: 65  ESHR--QDSVSLLT--FILLLTLTILTIWLFKHRRVRFLHETGLAMIYGLIVGVILRYGT 120

Query: 115 PAS 117
           PA+
Sbjct: 121 PAT 123


>gi|27436988 potassium voltage-gated channel, subfamily G, member 1
           [Homo sapiens]
          Length = 513

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 124 RALLLVGVVLLAYWFLSL-TLGFTFSVLHVVFGRF--FWIVRVVLFSMSCVYILHKYEGE 180
           RAL ++ V+ LA   L L TLG T       FG    F  V + LF+     I ++    
Sbjct: 346 RALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFLCVAIALFAPLLYVIENEMADS 405

Query: 181 PENAVLPLCFVVAVYFMT 198
           PE   +P C+  AV  MT
Sbjct: 406 PEFTSIPACYWWAVITMT 423


>gi|4504237 semaphorin 7A isoform 1 preproprotein [Homo sapiens]
          Length = 666

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 17/27 (62%), Positives = 17/27 (62%)

Query: 8  GPLARAGLLLLLLLLLLLGLLAPGAQG 34
          GP AR GL L L LLLLL   A  AQG
Sbjct: 20 GPPARLGLPLRLRLLLLLWAAAASAQG 46


>gi|225637520 semaphorin 7A isoform 2 preproprotein [Homo sapiens]
          Length = 652

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 17/27 (62%), Positives = 17/27 (62%)

Query: 8  GPLARAGLLLLLLLLLLLGLLAPGAQG 34
          GP AR GL L L LLLLL   A  AQG
Sbjct: 20 GPPARLGLPLRLRLLLLLWAAAASAQG 46


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 31   GAQGARGRGGAEKNSYRRTVNTF-------SQSVSSLFGEDNVRAAQKFLARLTERFVLG 83
            GA G RGRG A   S   ++ T        S S      +D+       L   T++FVL 
Sbjct: 1317 GAHGGRGRGRARLKSTASSIETLVVADIDSSPSKEEEEEDDDTMQNTVVLFSNTDKFVLM 1376

Query: 84   VDMFVETLWKVWTELLDVLGLDVSNLSQYFSPASVSSSPARALLLVG 130
             DM V  +   +    +   L  S  SQ + P  V+S   + +LL G
Sbjct: 1377 QDMCV--VCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKG 1421


>gi|168229159 bone marrow stromal cell antigen 1 precursor [Homo
          sapiens]
          Length = 318

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 20/35 (57%), Positives = 21/35 (60%)

Query: 5  ASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRG 39
          A+ G  A   L LLL LLLLL LLA G   AR RG
Sbjct: 2  AAQGCAASRLLQLLLQLLLLLLLLAAGGARARWRG 36


>gi|16933557 dachsous 1 precursor [Homo sapiens]
          Length = 3298

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 16/23 (69%), Positives = 16/23 (69%)

Query: 15 LLLLLLLLLLLGLLAPGAQGARG 37
          L LLLLLLLLLG   PGA G  G
Sbjct: 23 LPLLLLLLLLLGAGVPGAWGQAG 45



 Score = 28.5 bits (62), Expect = 5.8
 Identities = 16/26 (61%), Positives = 18/26 (69%)

Query: 16 LLLLLLLLLLGLLAPGAQGARGRGGA 41
          LLL LLLLLL LL  G  GA G+ G+
Sbjct: 21 LLLPLLLLLLLLLGAGVPGAWGQAGS 46


>gi|5032013 kinesin family member 20A [Homo sapiens]
          Length = 890

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 209 PSGPSNPSNPSVEEKLEHLEKQVRLLNIRLNRVLESLDRSK 249
           P   + P    V++KLE  +K +RLL   L ++ ESL  ++
Sbjct: 719 PPPSAKPFTIDVDKKLEEGQKNIRLLRTELQKLGESLQSAE 759


>gi|112734867 retinitis pigmentosa GTPase regulator interacting
           protein 1 [Homo sapiens]
          Length = 1286

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 13/30 (43%), Positives = 22/30 (73%)

Query: 221 EEKLEHLEKQVRLLNIRLNRVLESLDRSKD 250
           +E++E LEK+ +LLN   +++LES+  S D
Sbjct: 361 QERVEDLEKERKLLNDNYDKLLESMLDSSD 390


>gi|59709427 XK, Kell blood group complex subunit-related family,
           member 4 [Homo sapiens]
          Length = 650

 Score = 28.5 bits (62), Expect = 5.8
 Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 127 LLVGVVLLAYWFLSLTLGFTFSVLHVVFGRFFWIVRVVLFSMSCVYILHKYEGEPENAVL 186
           ++VG++ +  WF ++  G T   L +    +++++ +   ++S ++ L+K     +   +
Sbjct: 435 MVVGIIYIFSWF-NVKEGRTRCRLFI----YYFVILLENTALSALWYLYKAPQIADAFAI 489

Query: 187 PLCFVVAVYFMTG---PMGFYWRSSPSGPSNPSNPS 219
           P   VV   F+TG    + +Y    P+GP    +PS
Sbjct: 490 PALCVVFSSFLTGVVFMLMYYAFFHPNGPRFGQSPS 525


>gi|226371777 sex hormone-binding globulin isoform 3 precursor
          [Homo sapiens]
          Length = 293

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 15/19 (78%), Positives = 16/19 (84%)

Query: 6  SGGPLARAGLLLLLLLLLL 24
          S GPLA + LLLLLLLLLL
Sbjct: 3  SRGPLATSRLLLLLLLLLL 21


>gi|226371775 sex hormone-binding globulin isoform 2 precursor
          [Homo sapiens]
          Length = 384

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 15/19 (78%), Positives = 16/19 (84%)

Query: 6  SGGPLARAGLLLLLLLLLL 24
          S GPLA + LLLLLLLLLL
Sbjct: 3  SRGPLATSRLLLLLLLLLL 21


>gi|7382460 sex hormone-binding globulin isoform 1 precursor [Homo
          sapiens]
          Length = 402

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 15/19 (78%), Positives = 16/19 (84%)

Query: 6  SGGPLARAGLLLLLLLLLL 24
          S GPLA + LLLLLLLLLL
Sbjct: 3  SRGPLATSRLLLLLLLLLL 21


>gi|226371613 sex hormone-binding globulin isoform 4 precursor
          [Homo sapiens]
          Length = 287

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 15/19 (78%), Positives = 16/19 (84%)

Query: 6  SGGPLARAGLLLLLLLLLL 24
          S GPLA + LLLLLLLLLL
Sbjct: 3  SRGPLATSRLLLLLLLLLL 21


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,540,886
Number of Sequences: 37866
Number of extensions: 426773
Number of successful extensions: 2846
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2781
Number of HSP's gapped (non-prelim): 52
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.