Guide to the Human Genome
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Name: SHBG Sequence: fasta or formatted (402aa) NCBI GI: 7382460
Description:

sex hormone-binding globulin isoform 1 precursor

Referenced in:

Liver

Other entries for this name:
alt prot [287aa] sex hormone-binding globulin isoform 4 precursor
alt prot [384aa] sex hormone-binding globulin isoform 2 precursor
alt prot [293aa] sex hormone-binding globulin isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         27           2
 C cysteine            1.0          4           1
 D aspartate           5.7         23           2
 E glutamate           4.2         17           2
 F phenylalanine       2.5         10           1
 G glycine             9.0         36           2
 H histidine           3.2         13           1
 I isoleucine          2.5         10           1
 K lysine              3.0         12           1
 L leucine            17.4         70          10
 M methionine          1.7          7           1
 N asparagine          2.7         11           1
 P proline             8.7         35           2
 Q glutamine           5.0         20           1
 R arginine            5.7         23           2
 S serine              8.7         35           3
 T threonine           4.2         17           1
 V valine              5.0         20           2
 W tryptophan          2.7         11           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sex hormone-binding globulin isoform 1 precursor [Hom... 
SHBG                  0.938   sex hormone-binding globulin isoform 2 precursor [H...
SHBG                  0.704   sex hormone-binding globulin isoform 3 precursor [H...
SHBG                  0.580   sex hormone-binding globulin isoform 4 precursor [H...
PROS1                 0.103   protein S, alpha preproprotein 
GAS6                  0.088   growth arrest-specific 6 isoform 2 
GAS6                  0.088   growth arrest-specific 6 isoform 1 precursor 
GAS6                  0.084   growth arrest-specific 6 isoform 3 
LAMA5                 0.040   laminin alpha 5 
CNTNAP2               0.035   cell recognition molecule Caspr2 precursor 
LAMA4                 0.031   laminin, alpha 4 isoform 2 precursor 
LAMA4                 0.031   laminin, alpha 4 isoform 1 precursor 
LAMA4                 0.031   laminin, alpha 4 isoform 2 precursor 
LAMA2                 0.029   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.029   laminin alpha 2 subunit isoform a precursor 
LOC389722             0.028   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.028   PREDICTED: hypothetical protein LOC389722 isoform 1...
CNTNAP3               0.028   cell recognition molecule CASPR3 
CNTNAP4               0.025   cell recognition protein CASPR4 isoform 2 
CNTNAP4               0.025   cell recognition protein CASPR4 isoform 1 
LAMA3                 0.023   laminin alpha 3 subunit isoform 1 
LAMA3                 0.023   laminin alpha 3 subunit isoform 4 
LAMA3                 0.023   laminin alpha 3 subunit isoform 3 
LAMA3                 0.023   laminin alpha 3 subunit isoform 2 
AGRN                  0.021   agrin 
HSPG2                 0.021   heparan sulfate proteoglycan 2 
CNTNAP1               0.021   contactin associated protein 1 precursor 
CNTNAP5               0.019   contactin associated protein-like 5 
LAMA1                 0.018   laminin, alpha 1 precursor 
EGFLAM                0.018   EGF-like, fibronectin type III and laminin G domains...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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