Guide to the Human Genome
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Name: SHBG Sequence: fasta or formatted (293aa) NCBI GI: 226371777
Description:

sex hormone-binding globulin isoform 3 precursor

Referenced in:

Liver

Other entries for this name:
alt prot [287aa] sex hormone-binding globulin isoform 4 precursor
alt prot [384aa] sex hormone-binding globulin isoform 2 precursor
alt prot [402aa] sex hormone-binding globulin isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         20           2
 C cysteine            0.7          2           1
 D aspartate           6.1         18           2
 E glutamate           5.5         16           2
 F phenylalanine       3.1          9           1
 G glycine             7.8         23           2
 H histidine           3.4         10           1
 I isoleucine          3.1          9           1
 K lysine              2.7          8           1
 L leucine            16.4         48          10
 M methionine          1.7          5           1
 N asparagine          2.4          7           1
 P proline             9.2         27           2
 Q glutamine           4.4         13           1
 R arginine            6.5         19           2
 S serine              7.2         21           3
 T threonine           5.1         15           1
 V valine              4.8         14           1
 W tryptophan          2.7          8           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sex hormone-binding globulin isoform 3 precursor [H... 
SHBG                  0.971   sex hormone-binding globulin isoform 1 precursor [Hom...
SHBG                  0.886   sex hormone-binding globulin isoform 2 precursor [H...
SHBG                  0.801   sex hormone-binding globulin isoform 4 precursor [H...
GAS6                  0.121   growth arrest-specific 6 isoform 2 
GAS6                  0.121   growth arrest-specific 6 isoform 1 precursor 
PROS1                 0.120   protein S, alpha preproprotein 
GAS6                  0.116   growth arrest-specific 6 isoform 3 
CNTNAP2               0.049   cell recognition molecule Caspr2 precursor 
LAMA5                 0.042   laminin alpha 5 
LAMA2                 0.040   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.040   laminin alpha 2 subunit isoform a precursor 
LAMA4                 0.038   laminin, alpha 4 isoform 2 precursor 
LAMA4                 0.038   laminin, alpha 4 isoform 1 precursor 
LAMA4                 0.038   laminin, alpha 4 isoform 2 precursor 
LOC389722             0.038   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.038   PREDICTED: hypothetical protein LOC389722 isoform 1...
CNTNAP3               0.038   cell recognition molecule CASPR3 
CNTNAP4               0.035   cell recognition protein CASPR4 isoform 2 
CNTNAP4               0.035   cell recognition protein CASPR4 isoform 1 
LAMA3                 0.031   laminin alpha 3 subunit isoform 1 
LAMA3                 0.031   laminin alpha 3 subunit isoform 4 
LAMA3                 0.031   laminin alpha 3 subunit isoform 3 
LAMA3                 0.031   laminin alpha 3 subunit isoform 2 
AGRN                  0.029   agrin 
HSPG2                 0.029   heparan sulfate proteoglycan 2 
CNTNAP1               0.029   contactin associated protein 1 precursor 
CNTNAP5               0.026   contactin associated protein-like 5 
EGFLAM                0.024   EGF-like, fibronectin type III and laminin G domains...
EGFLAM                0.024   EGF-like, fibronectin type III and laminin G domains...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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