Guide to the Human Genome
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Name: SHBG Sequence: fasta or formatted (287aa) NCBI GI: 226371613
Description:

sex hormone-binding globulin isoform 4 precursor

Referenced in:

Liver

Other entries for this name:
alt prot [384aa] sex hormone-binding globulin isoform 2 precursor
alt prot [293aa] sex hormone-binding globulin isoform 3 precursor
alt prot [402aa] sex hormone-binding globulin isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         17           1
 C cysteine            1.4          4           1
 D aspartate           6.6         19           2
 E glutamate           5.2         15           2
 F phenylalanine       2.8          8           1
 G glycine             8.4         24           2
 H histidine           3.5         10           1
 I isoleucine          3.1          9           1
 K lysine              2.1          6           1
 L leucine            14.3         41          10
 M methionine          1.7          5           1
 N asparagine          3.1          9           1
 P proline             7.7         22           2
 Q glutamine           4.5         13           1
 R arginine            7.3         21           2
 S serine              8.4         24           3
 T threonine           5.6         16           1
 V valine              5.2         15           1
 W tryptophan          2.8          8           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sex hormone-binding globulin isoform 4 precursor [H... 
SHBG                  0.813   sex hormone-binding globulin isoform 3 precursor [H...
SHBG                  0.813   sex hormone-binding globulin isoform 1 precursor [Hom...
SHBG                  0.727   sex hormone-binding globulin isoform 2 precursor [H...
GAS6                  0.111   growth arrest-specific 6 isoform 2 
GAS6                  0.111   growth arrest-specific 6 isoform 1 precursor 
GAS6                  0.106   growth arrest-specific 6 isoform 3 
PROS1                 0.097   protein S, alpha preproprotein 
CNTNAP2               0.049   cell recognition molecule Caspr2 precursor 
LAMA2                 0.040   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.040   laminin alpha 2 subunit isoform a precursor 
LAMA4                 0.039   laminin, alpha 4 isoform 2 precursor 
LAMA4                 0.039   laminin, alpha 4 isoform 1 precursor 
LAMA4                 0.039   laminin, alpha 4 isoform 2 precursor 
LOC389722             0.039   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.039   PREDICTED: hypothetical protein LOC389722 isoform 1...
CNTNAP3               0.039   cell recognition molecule CASPR3 
CNTNAP4               0.035   cell recognition protein CASPR4 isoform 2 
CNTNAP4               0.035   cell recognition protein CASPR4 isoform 1 
LAMA5                 0.033   laminin alpha 5 
LAMA3                 0.032   laminin alpha 3 subunit isoform 1 
LAMA3                 0.032   laminin alpha 3 subunit isoform 4 
LAMA3                 0.032   laminin alpha 3 subunit isoform 3 
LAMA3                 0.032   laminin alpha 3 subunit isoform 2 
AGRN                  0.030   agrin 
HSPG2                 0.030   heparan sulfate proteoglycan 2 
CNTNAP1               0.030   contactin associated protein 1 precursor 
CNTNAP5               0.026   contactin associated protein-like 5 
EGFLAM                0.025   EGF-like, fibronectin type III and laminin G domains...
EGFLAM                0.025   EGF-like, fibronectin type III and laminin G domains...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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