APH1A 2016

Name: APH1A	Sequence: fasta or formatted (247aa)		NCBI GI: 117606357
Description: anterior pharynx defective 1 homolog A isoform 2		Referenced in: Notch Pathway
Other entries for this name: alt prot [265aa] anterior pharynx defective 1 homolog A isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 27 2 C cysteine 1.2 3 1 D aspartate 3.6 9 1 E glutamate 2.0 5 1 F phenylalanine 8.5 21 2 G glycine 9.3 23 2 H histidine 1.6 4 1 I isoleucine 6.9 17 2 K lysine 1.6 4 2 L leucine 15.0 37 3 M methionine 1.2 3 1 N asparagine 0.8 2 1 P proline 2.8 7 1 Q glutamine 1.6 4 1 R arginine 4.5 11 3 S serine 8.5 21 1 T threonine 4.0 10 1 V valine 9.7 24 2 W tryptophan 2.4 6 1 Y tyrosine 3.6 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 anterior pharynx defective 1 homolog A isoform 2 [H... APH1A 0.991 anterior pharynx defective 1 homolog A isoform 1 [H... APH1B 0.594 presenilin stabilization factor-like isoform 1 [Homo... APH1B 0.419 presenilin stabilization factor-like isoform 2 [Hom... PTPN21 0.011 protein tyrosine phosphatase, non-receptor type 21 ... SLC6A6 0.011 solute carrier family 6 (neurotransmitter transport... SLC6A6 0.011 solute carrier family 6 (neurotransmitter transporte... RNF26 0.009 ring finger protein 26 BRI3BP 0.009 BRI3-binding protein SLC7A2 0.006 solute carrier family 7, member 2 isoform 1 SLC7A2 0.006 solute carrier family 7, member 2 isoform 2 ABCC11 0.006 ATP-binding cassette, sub-family C, member 11 isofor... ABCC11 0.006 ATP-binding cassette, sub-family C, member 11 isofor... ABCC11 0.006 ATP-binding cassette, sub-family C, member 11 isofor... LOC100292887 0.006 PREDICTED: hypothetical protein LOC100288650 0.006 PREDICTED: hypothetical protein XP_002343505 GPR88 0.006 G-protein coupled receptor 88 ATG9B 0.006 ATG9 autophagy related 9 homolog B BTAF1 0.006 BTAF1 RNA polymerase II, B-TFIID transcription facto... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.