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Search of human proteins with 19913377
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19913377 G6B protein isoform G6b-C precursor [Homo sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19913377 G6B protein isoform G6b-C precursor [Homo sapiens] 451 e-127
gi|19913381 G6B protein isoform G6b-E precursor [Homo sapiens] 393 e-110
gi|19913375 G6B protein isoform G6b-B precursor [Homo sapiens] 390 e-109
gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens] 288 2e-78
gi|19913373 G6B protein isoform G6b-A precursor [Homo sapiens] 288 2e-78
gi|19913379 G6B protein isoform G6b-D precursor [Homo sapiens] 288 3e-78
gi|56711322 ring finger protein 43 [Homo sapiens] 33 0.14
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 32 0.54
gi|148886654 polydom [Homo sapiens] 30 1.2
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 30 1.6
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 30 1.6
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 30 1.6
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 30 1.6
gi|32490572 erythrocyte membrane protein band 4.1-like 3 [Homo s... 30 2.1
gi|239753349 PREDICTED: hypothetical protein LOC285141 [Homo sap... 30 2.1
gi|239747917 PREDICTED: hypothetical protein LOC285141 [Homo sap... 30 2.1
gi|239741811 PREDICTED: hypothetical protein LOC285141 [Homo sap... 30 2.1
gi|206725526 signal-induced proliferation-associated protein 1 [... 30 2.1
gi|206725523 signal-induced proliferation-associated protein 1 [... 30 2.1
gi|4759144 solute carrier family 9 (sodium/hydrogen exchanger), ... 29 2.7
gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 29 2.7
gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 29 2.7
gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 29 2.7
gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 29 2.7
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 29 2.7
gi|156151443 alpha-kinase 1 [Homo sapiens] 29 2.7
gi|156151441 alpha-kinase 1 [Homo sapiens] 29 2.7
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 29 3.5
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 29 3.5
gi|63054866 leucine rich repeat containing 16A [Homo sapiens] 28 4.6
>gi|19913377 G6B protein isoform G6b-C precursor [Homo sapiens]
Length = 217
Score = 451 bits (1159), Expect = e-127
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
Query: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
Query: 121 HVLGDRTYCKAPGPTHGACPRNRFDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLD 180
HVLGDRTYCKAPGPTHGACPRNRFDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLD
Sbjct: 121 HVLGDRTYCKAPGPTHGACPRNRFDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLD 180
Query: 181 QEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 217
QEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV
Sbjct: 181 QEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 217
>gi|19913381 G6B protein isoform G6b-E precursor [Homo sapiens]
Length = 197
Score = 393 bits (1009), Expect = e-110
Identities = 197/217 (90%), Positives = 197/217 (90%), Gaps = 20/217 (9%)
Query: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
Query: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
Query: 121 HVLGDRTYCKAPGPTHGACPRNRFDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLD 180
HVLGDRTYCKAPGPTH APLVKTEPQRPVKEEEPKIPGDLD
Sbjct: 121 HVLGDRTYCKAPGPTH--------------------APLVKTEPQRPVKEEEPKIPGDLD 160
Query: 181 QEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 217
QEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV
Sbjct: 161 QEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 197
>gi|19913375 G6B protein isoform G6b-B precursor [Homo sapiens]
Length = 241
Score = 390 bits (1003), Expect = e-109
Identities = 202/241 (83%), Positives = 203/241 (84%), Gaps = 24/241 (9%)
Query: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
Query: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
Query: 121 HVLGDRTYCKAPGPTHGACPRNRFDHSLDL------------------LCP------PHI 156
HVLGDRTYCKAPGPTHG+ L L P P
Sbjct: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180
Query: 157 APLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVV 216
APLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVV
Sbjct: 181 APLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVV 240
Query: 217 V 217
V
Sbjct: 241 V 241
>gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens]
Length = 222
Score = 288 bits (738), Expect = 2e-78
Identities = 137/138 (99%), Positives = 138/138 (100%)
Query: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
Query: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
Query: 121 HVLGDRTYCKAPGPTHGA 138
HVLGDRTYCKAPGPTHG+
Sbjct: 121 HVLGDRTYCKAPGPTHGS 138
>gi|19913373 G6B protein isoform G6b-A precursor [Homo sapiens]
Length = 237
Score = 288 bits (738), Expect = 2e-78
Identities = 137/138 (99%), Positives = 138/138 (100%)
Query: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
Query: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
Query: 121 HVLGDRTYCKAPGPTHGA 138
HVLGDRTYCKAPGPTHG+
Sbjct: 121 HVLGDRTYCKAPGPTHGS 138
>gi|19913379 G6B protein isoform G6b-D precursor [Homo sapiens]
Length = 193
Score = 288 bits (736), Expect = 3e-78
Identities = 137/140 (97%), Positives = 137/140 (97%)
Query: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1 MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
Query: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61 RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
Query: 121 HVLGDRTYCKAPGPTHGACP 140
HVLGDRTYCKAPGPTH P
Sbjct: 121 HVLGDRTYCKAPGPTHALSP 140
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 33.5 bits (75), Expect = 0.14
Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 30/189 (15%)
Query: 25 GRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPLQPFV-GR 83
G D V ++C +S ++ V S C LS P+++ S G P +QP V R
Sbjct: 473 GSSSDSV-VNCTDIS--LQGVHGSSSTFCSSLSSDFDPLVYCSPKGDPQRVDMQPSVTSR 529
Query: 84 LRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGACPRNR 143
RSLDS + E +S S + + RH + + + + PGP G P++R
Sbjct: 530 PRSLDSVVPTGETQVS---SHVHYHRHRHHHYKKRF------QWHGRKPGPETGV-PQSR 579
Query: 144 FDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLST 203
P+ +T+PQ + ++ PS L + R
Sbjct: 580 -------------PPIPRTQPQPEPPSPDQQVTRSNSAAPS---GRLSNPQCPRALPEPA 623
Query: 204 ADPADASTI 212
P DAS+I
Sbjct: 624 PGPVDASSI 632
>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
sapiens]
Length = 1781
Score = 31.6 bits (70), Expect = 0.54
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Query: 51 PACKGLSKGRRPILWASSSGTPT-------VPPLQP 79
PA G SKG RP L++S S TPT PP QP
Sbjct: 1367 PAVAGQSKGYRPKLYSSGSSTPTGLAGGSRDPPRQP 1402
>gi|148886654 polydom [Homo sapiens]
Length = 3571
Score = 30.4 bits (67), Expect = 1.2
Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 42/130 (32%)
Query: 21 ASLDGRPGDRVNLSCGG----VSHPIRWV-----WAPSFPACKGLSKGRRPILWASSSGT 71
AS D +PG +VNL C V +P+++ W P C+ +S G
Sbjct: 1644 ASEDLKPGSKVNLFCDPGFQLVGNPVQYCLNQGQWTQPLPHCERISCG------------ 1691
Query: 72 PTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGD-RTYCK 130
VPP P S D AG + T+ C + ++LGD R +C
Sbjct: 1692 --VPP--PLENGFHSADD--------FYAGSTVTYQCNNGY--------YLLGDSRMFCT 1731
Query: 131 APGPTHGACP 140
G +G P
Sbjct: 1732 DNGSWNGVSP 1741
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 30.0 bits (66), Expect = 1.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 34 SCGGVSHPIRWVWAPSF--PACKGLSKGRRPILWASSSGTPTVPPLQP 79
S GG S P W+W P+ P+ G S R P+L + P+ P P
Sbjct: 555 SAGGKSSPEPWLWPPTMVPPSISGHS--RAPVLELEKAEGPSARPATP 600
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 153 PPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLL 186
PP +AP P + +P+IP + D+EPS L
Sbjct: 680 PPEMAPSSAPPSTPPTHKAKPQIPAERDREPSKL 713
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 153 PPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLL 186
PP +AP P + +P+IP + D+EPS L
Sbjct: 680 PPEMAPSSAPPSTPPTHKAKPQIPAERDREPSKL 713
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 153 PPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLL 186
PP +AP P + +P+IP + D+EPS L
Sbjct: 680 PPEMAPSSAPPSTPPTHKAKPQIPAERDREPSKL 713
>gi|32490572 erythrocyte membrane protein band 4.1-like 3 [Homo
sapiens]
Length = 1087
Score = 29.6 bits (65), Expect = 2.1
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 15/57 (26%)
Query: 130 KAPGPTHGACPRNRFDHSLDLLCPP--HIAPLVKTEPQRPVKEEEPKIPGDLDQEPS 184
K+PG +CP L PP H AP TE +R KE + K+PG EPS
Sbjct: 502 KSPGLGTDSCP----------LSPPSTHCAPTSPTELRRRCKENDCKLPG---YEPS 545
>gi|239753349 PREDICTED: hypothetical protein LOC285141 [Homo
sapiens]
Length = 327
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 26 RPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
RPG RV CG + W+WAP A +G +GR
Sbjct: 99 RPGARV---CGPLYRTWFWLWAPGPVAARGRREGR 130
>gi|239747917 PREDICTED: hypothetical protein LOC285141 [Homo
sapiens]
Length = 327
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 26 RPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
RPG RV CG + W+WAP A +G +GR
Sbjct: 99 RPGARV---CGPLYRTWFWLWAPGPVAARGRREGR 130
>gi|239741811 PREDICTED: hypothetical protein LOC285141 [Homo
sapiens]
Length = 327
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 26 RPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
RPG RV CG + W+WAP A +G +GR
Sbjct: 99 RPGARV---CGPLYRTWFWLWAPGPVAARGRREGR 130
>gi|206725526 signal-induced proliferation-associated protein 1
[Homo sapiens]
Length = 1042
Score = 29.6 bits (65), Expect = 2.1
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 81 VGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGDR-TYCKAPGPTHGAC 139
V RL+ + G EL L G G D V HV +R T+ + G GA
Sbjct: 673 VARLQLVSRGCETRELALPRDGQGRL---GFEVDAEGFVTHV--ERFTFAETAGLRPGAR 727
Query: 140 PRNRFDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPR 199
+L L P A L+++ P+ V +P D P +++L L+L P
Sbjct: 728 LLRVCGQTLPSLRPEAAAQLLRSAPKVCVTV----LPPDESGRPRRSFSELYTLSLQEPS 783
Query: 200 RLSTADP 206
R DP
Sbjct: 784 RRGAPDP 790
>gi|206725523 signal-induced proliferation-associated protein 1
[Homo sapiens]
Length = 1042
Score = 29.6 bits (65), Expect = 2.1
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 81 VGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGDR-TYCKAPGPTHGAC 139
V RL+ + G EL L G G D V HV +R T+ + G GA
Sbjct: 673 VARLQLVSRGCETRELALPRDGQGRL---GFEVDAEGFVTHV--ERFTFAETAGLRPGAR 727
Query: 140 PRNRFDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPR 199
+L L P A L+++ P+ V +P D P +++L L+L P
Sbjct: 728 LLRVCGQTLPSLRPEAAAQLLRSAPKVCVTV----LPPDESGRPRRSFSELYTLSLQEPS 783
Query: 200 RLSTADP 206
R DP
Sbjct: 784 RRGAPDP 790
>gi|4759144 solute carrier family 9 (sodium/hydrogen exchanger),
isoform 5 [Homo sapiens]
Length = 896
Score = 29.3 bits (64), Expect = 2.7
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 142 NRFDHSLDLLCPP--HIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLA-LSRP 198
N+ SL+ L P + AP++ P P EEP++P L +P +A LA R
Sbjct: 792 NQSISSLESLASPPCNQAPILTCLPPHPRGTEEPQVPLHLPSDPRSSFAFPPSLAKAGRS 851
Query: 199 RRLSTAD 205
R S+AD
Sbjct: 852 RSESSAD 858
>gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]
Length = 531
Score = 29.3 bits (64), Expect = 2.7
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 133 GPTHGACPRNRFDHSLDLLC----PPHIAP-LVKTEPQRPVKEE-EPKIPGDLDQEPSLL 186
G + +CP DH LD P AP P P+ EE E K+ D+D P L
Sbjct: 401 GLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLG 460
Query: 187 YADLDHLALSRPRRLSTADPADAST 211
A+L S P T + ++S+
Sbjct: 461 GAELALRESSSPESFITEEVDESSS 485
>gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]
Length = 552
Score = 29.3 bits (64), Expect = 2.7
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 133 GPTHGACPRNRFDHSLDLLC----PPHIAP-LVKTEPQRPVKEE-EPKIPGDLDQEPSLL 186
G + +CP DH LD P AP P P+ EE E K+ D+D P L
Sbjct: 422 GLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLG 481
Query: 187 YADLDHLALSRPRRLSTADPADAST 211
A+L S P T + ++S+
Sbjct: 482 GAELALRESSSPESFITEEVDESSS 506
>gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
Length = 555
Score = 29.3 bits (64), Expect = 2.7
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 133 GPTHGACPRNRFDHSLDLLC----PPHIAP-LVKTEPQRPVKEE-EPKIPGDLDQEPSLL 186
G + +CP DH LD P AP P P+ EE E K+ D+D P L
Sbjct: 401 GLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLG 460
Query: 187 YADLDHLALSRPRRLSTADPADAST 211
A+L S P T + ++S+
Sbjct: 461 GAELALRESSSPESFITEEVDESSS 485
>gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]
Length = 576
Score = 29.3 bits (64), Expect = 2.7
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 133 GPTHGACPRNRFDHSLDLLC----PPHIAP-LVKTEPQRPVKEE-EPKIPGDLDQEPSLL 186
G + +CP DH LD P AP P P+ EE E K+ D+D P L
Sbjct: 422 GLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLG 481
Query: 187 YADLDHLALSRPRRLSTADPADAST 211
A+L S P T + ++S+
Sbjct: 482 GAELALRESSSPESFITEEVDESSS 506
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 29.3 bits (64), Expect = 2.7
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 152 CPPHIAPLVKTEPQRPVKEEEPKIP----GDLDQEPSLL 186
CPPHI P K P+ P P P GDL P L
Sbjct: 1255 CPPHILPPEKRPPEPPGPPPPPPPPPLVEGDLSSAPQEL 1293
>gi|156151443 alpha-kinase 1 [Homo sapiens]
Length = 1244
Score = 29.3 bits (64), Expect = 2.7
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 26 RPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTV 74
+PG+ +N S S + W+ +P+F + G S+G P + +SSG+ V
Sbjct: 913 QPGNMLNCSQNSSSSSVWWLKSPAFSS--GSSEGDSPWSYLNSSGSSWV 959
>gi|156151441 alpha-kinase 1 [Homo sapiens]
Length = 1244
Score = 29.3 bits (64), Expect = 2.7
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 26 RPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTV 74
+PG+ +N S S + W+ +P+F + G S+G P + +SSG+ V
Sbjct: 913 QPGNMLNCSQNSSSSSVWWLKSPAFSS--GSSEGDSPWSYLNSSGSSWV 959
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 28.9 bits (63), Expect = 3.5
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 24/83 (28%)
Query: 154 PHIAPLVKTEPQRP-------------VKEEEPKIPGDLDQEPS--------LLYADLDH 192
P + P +T+PQ P V E PK P +L+ EP L D+D
Sbjct: 422 PQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELEPEPEIEGLLTPVLEAGDVDE 481
Query: 193 LALSR---PRRLSTADPADASTI 212
++R P RL A P +A ++
Sbjct: 482 GPVARPLSPTRLQPALPPEAQSV 504
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 28.9 bits (63), Expect = 3.5
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 24/83 (28%)
Query: 154 PHIAPLVKTEPQRP-------------VKEEEPKIPGDLDQEPS--------LLYADLDH 192
P + P +T+PQ P V E PK P +L+ EP L D+D
Sbjct: 422 PQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELEPEPEIEGLLTPVLEAGDVDE 481
Query: 193 LALSR---PRRLSTADPADASTI 212
++R P RL A P +A ++
Sbjct: 482 GPVARPLSPTRLQPALPPEAQSV 504
>gi|63054866 leucine rich repeat containing 16A [Homo sapiens]
Length = 1326
Score = 28.5 bits (62), Expect = 4.6
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 144 FDHSLDLLCPPHIAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLST 203
F+ DL P+ +P P +E + G + + PS L+H RP+R
Sbjct: 936 FEMEFDLDKALEEVPIHIEDPPFPSLRQEKRSSGFISELPSEEGKKLEHFTKLRPKRNKK 995
Query: 204 ADPADASTIYAVVV 217
P A+ A +V
Sbjct: 996 QQPTQAAVCAANIV 1009
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,544,714
Number of Sequences: 37866
Number of extensions: 560122
Number of successful extensions: 1610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1589
Number of HSP's gapped (non-prelim): 49
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.