Guide to the Human Genome
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Name: SLC9A5 Sequence: fasta or formatted (896aa) NCBI GI: 4759144
Description:

solute carrier family 9 (sodium/hydrogen exchanger), isoform 5

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         75           2
 C cysteine            1.6         14           1
 D aspartate           4.0         36           2
 E glutamate           6.0         54           6
 F phenylalanine       4.6         41           2
 G glycine             6.4         57           2
 H histidine           2.7         24           2
 I isoleucine          4.4         39           2
 K lysine              4.8         43           2
 L leucine            12.6        113           2
 M methionine          1.6         14           1
 N asparagine          2.1         19           1
 P proline             5.2         47           3
 Q glutamine           3.7         33           3
 R arginine            5.2         47           3
 S serine              8.0         72           2
 T threonine           5.7         51           2
 V valine              9.0         81           3
 W tryptophan          1.7         15           1
 Y tyrosine            2.3         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 9 (sodium/hydrogen exchanger), ... 
SLC9A3                0.427   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A2                0.286   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A1                0.264   solute carrier family 9, isoform A1 
SLC9A4                0.249   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A8                0.113   sodium/hydrogen exchanger 8 
SLC9A9                0.111   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A7                0.095   solute carrier family 9, member 7 
SLC9A6                0.094   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A6                0.094   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A10               0.015   sperm-specific sodium proton exchanger 
PLEKHG5               0.011   pleckstrin homology domain containing family G membe...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
ZC3H18                0.009   zinc finger CCCH-type containing 18 
G3BP2                 0.007   Ras-GTPase activating protein SH3 domain-binding pro...
FAM9A                 0.007   family with sequence similarity 9, member A 
ATP6V0B               0.007   ATPase, H+ transporting, lysosomal 21kDa, V0 subunit ...
NKTR                  0.007   natural killer-tumor recognition sequence 
PRPF38B               0.006   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
MICAL3                0.006   microtubule associated monoxygenase, calponin and L...
IGF2R                 0.006   insulin-like growth factor 2 receptor precursor [Ho...
ATP6V0B               0.006   ATPase, H+ transporting, lysosomal 21kDa, V0 subunit...
GAK                   0.006   cyclin G associated kinase 
BCOR                  0.006   BCL-6 interacting corepressor isoform a 
BCOR                  0.006   BCL-6 interacting corepressor isoform c 
BCOR                  0.006   BCL-6 interacting corepressor isoform b 
BCOR                  0.006   BCL-6 interacting corepressor isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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