LRRC16A 34389

Name: LRRC16A	Sequence: fasta or formatted (1326aa)		NCBI GI: 63054866
Description: leucine rich repeat containing 16A		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 79 2 C cysteine 1.6 21 1 D aspartate 5.2 69 2 E glutamate 7.8 104 2 F phenylalanine 2.5 33 2 G glycine 5.3 70 2 H histidine 2.3 30 2 I isoleucine 5.2 69 3 K lysine 8.1 107 3 L leucine 11.2 148 3 M methionine 2.4 32 2 N asparagine 4.3 57 2 P proline 5.1 67 2 Q glutamine 4.7 62 2 R arginine 5.2 69 2 S serine 10.9 145 4 T threonine 4.8 64 2 V valine 5.7 76 2 W tryptophan 0.7 9 1 Y tyrosine 1.1 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 16A LRRC16B 0.322 leucine rich repeat containing 16B RLTPR 0.229 RGD motif, leucine rich repeats, tropomodulin domain... NLRC3 0.024 NOD3 protein NOD1 0.017 nucleotide-binding oligomerization domain containing ... C14orf166B 0.015 hypothetical protein LOC145497 NLRP5 0.014 NACHT, LRR and PYD containing protein 5 NLRP13 0.012 NACHT, leucine rich repeat and PYD containing 13 [H... NLRP12 0.011 NLR family, pyrin domain containing 12 isoform 2 [Ho... NLRP3 0.011 NLR family, pyrin domain containing 3 isoform a [Ho... NLRP3 0.011 NLR family, pyrin domain containing 3 isoform a [Hom... NLRC5 0.011 nucleotide-binding oligomerization domains 27 [Homo... LRRC34 0.010 leucine rich repeat containing 34 NOD2 0.009 nucleotide-binding oligomerization domain containing... NLRP3 0.009 NLR family, pyrin domain containing 3 isoform d [Ho... SRRM2 0.009 splicing coactivator subunit SRm300 TCTE1 0.009 t-complex-associated testis expressed 1 USP31 0.009 ubiquitin specific peptidase 31 RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor RNH1 0.009 ribonuclease/angiogenin inhibitor LRRC45 0.009 leucine rich repeat containing 45 NLRP9 0.009 NLR family, pyrin domain containing 9 SFRS4 0.008 splicing factor, arginine/serine-rich 4 SNCAIP 0.008 synuclein alpha interacting protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.