Guide to the Human Genome
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Name: SLC4A5 Sequence: fasta or formatted (1121aa) NCBI GI: 19743827
Description:

sodium bicarbonate transporter 4 isoform c

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [1137aa] sodium bicarbonate transporter 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         67           2
 C cysteine            1.7         19           1
 D aspartate           5.4         61           2
 E glutamate           5.1         57           2
 F phenylalanine       5.7         64           2
 G glycine             8.5         95           7
 H histidine           2.4         27           2
 I isoleucine          7.6         85           2
 K lysine              5.9         66           2
 L leucine            10.9        122           2
 M methionine          2.5         28           1
 N asparagine          2.7         30           1
 P proline             6.2         69           3
 Q glutamine           3.4         38           2
 R arginine            4.8         54           3
 S serine              7.4         83           3
 T threonine           4.9         55           2
 V valine              5.3         59           1
 W tryptophan          1.6         18           2
 Y tyrosine            2.1         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sodium bicarbonate transporter 4 isoform c 
SLC4A5                0.996   sodium bicarbonate transporter 4 isoform a 
SLC4A4                0.573   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.570   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.570   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A10               0.427   solute carrier family 4, sodium bicarbonate transpo...
SLC4A8                0.423   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A8                0.422   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A9                0.368   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A7                0.359   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A3                0.258   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.258   solute carrier family 4, anion exchanger, member 3 ...
SLC4A2                0.257   solute carrier family 4, anion exchanger, member 2 ...
SLC4A1                0.226   solute carrier family 4, anion exchanger, member 1 [H...
SLC4A11               0.087   solute carrier family 4 member 11 
KRT9                  0.016   keratin 9 
POU4F1                0.015   POU domain, class 4, transcription factor 1 
AR                    0.014   androgen receptor isoform 1 
YEATS2                0.014   YEATS domain containing 2 
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
SHOX2                 0.014   short stature homeobox 2 isoform a 
SIX3                  0.013   sine oculis homeobox homolog 3 
ZIC2                  0.013   zinc finger protein of the cerebellum 2 
FAM98B                0.013   family with sequence similarity 98, member B isofor...
KRT10                 0.013   keratin 10 
SOX4                  0.013   SRY (sex determining region Y)-box 4 
FBL                   0.013   fibrillarin 
MAF                   0.012   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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