Guide to the Human Genome
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Name: SLC4A11 Sequence: fasta or formatted (891aa) NCBI GI: 14042960
Description:

solute carrier family 4 member 11

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         72           2
 C cysteine            1.6         14           1
 D aspartate           4.2         37           2
 E glutamate           4.8         43           3
 F phenylalanine       5.2         46           2
 G glycine             5.7         51           2
 H histidine           2.6         23           1
 I isoleucine          5.9         53           2
 K lysine              4.0         36           2
 L leucine            14.0        125           4
 M methionine          2.7         24           1
 N asparagine          3.6         32           2
 P proline             4.7         42           2
 Q glutamine           3.4         30           2
 R arginine            5.1         45           2
 S serine              7.2         64           2
 T threonine           6.4         57           3
 V valine              6.2         55           1
 W tryptophan          1.0          9           1
 Y tyrosine            3.7         33           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 4 member 11 
SLC4A3                0.131   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.131   solute carrier family 4, anion exchanger, member 3 ...
SLC4A2                0.130   solute carrier family 4, anion exchanger, member 2 ...
SLC4A1                0.126   solute carrier family 4, anion exchanger, member 1 [H...
SLC4A4                0.118   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.118   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.118   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A8                0.114   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A8                0.114   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A10               0.114   solute carrier family 4, sodium bicarbonate transpo...
SLC4A5                0.112   sodium bicarbonate transporter 4 isoform c 
SLC4A7                0.110   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A5                0.107   sodium bicarbonate transporter 4 isoform a 
SLC4A9                0.106   solute carrier family 4, sodium bicarbonate cotrans...
LAMC2                 0.008   laminin, gamma 2 isoform a precursor 
FGFR4                 0.003   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.003   fibroblast growth factor receptor 4 isoform 1 precur...
PREX2                 0.003   DEP domain containing 2 isoform a 
OR9G4                 0.003   olfactory receptor, family 9, subfamily G, member 4 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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