Guide to the Human Genome
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Name: WWOX Sequence: fasta or formatted (36aa) NCBI GI: 18860888
Description:

WW domain-containing oxidoreductase isoform 3

Referenced in:

Alcohol and Aldehyde Dehydrogenases
WW Domain

Other entries for this name:
alt prot [189aa] WW domain-containing oxidoreductase isoform 2
alt prot [414aa] WW domain-containing oxidoreductase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1          4           2
 C cysteine            0.0          0           0
 D aspartate          13.9          5           2
 E glutamate          11.1          4           2
 F phenylalanine       0.0          0           0
 G glycine             8.3          3           1
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              5.6          2           1
 L leucine             8.3          3           1
 M methionine          2.8          1           1
 N asparagine          0.0          0           0
 P proline             5.6          2           2
 Q glutamine           0.0          0           0
 R arginine            5.6          2           1
 S serine              2.8          1           1
 T threonine           8.3          3           2
 V valine              2.8          1           1
 W tryptophan          5.6          2           1
 Y tyrosine            8.3          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW domain-containing oxidoreductase isoform 3 
WWOX                  0.965   WW domain-containing oxidoreductase isoform 1 
WWOX                  0.965   WW domain-containing oxidoreductase isoform 2 
NEDD4                 0.175   neural precursor cell expressed, developmentally do...
NEDD4                 0.175   neural precursor cell expressed, developmentally do...
ITCH                  0.105   itchy homolog E3 ubiquitin protein ligase 
WWP2                  0.088   WW domain containing E3 ubiquitin protein ligase 2 i...
PIN1                  0.088   protein (peptidyl-prolyl cis/trans isomerase) NIMA-in...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally dow...
SMURF1                0.070   Smad ubiquitination regulatory factor 1 isoform 1 [H...
SMURF1                0.070   Smad ubiquitination regulatory factor 1 isoform 2 [H...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
NEDD4L                0.070   neural precursor cell expressed, developmentally do...
YAP1                  0.070   Yes-associated protein 1, 65kDa isoform 1 
WWP2                  0.070   WW domain containing E3 ubiquitin protein ligase 2 i...
SMURF2                0.053   SMAD specific E3 ubiquitin protein ligase 2 
WWTR1                 0.035   WW domain containing transcription regulator 1 [Homo...
WWP2                  0.035   WW domain containing E3 ubiquitin protein ligase 2 i...
WWC1                  0.035   WW and C2 domain containing 1 isoform 3 
WWC1                  0.035   WW and C2 domain containing 1 isoform 2 
WWC1                  0.035   WW and C2 domain containing 1 isoform 1 
WWP1                  0.035   WW domain containing E3 ubiquitin protein ligase 1 [...
MAGI2                 0.035   membrane associated guanylate kinase, WW and PDZ dom...
APOB48R               0.018   apolipoprotein B48 receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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