Guide to the Human Genome
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Name: WWOX Sequence: fasta or formatted (189aa) NCBI GI: 18860884
Description:

WW domain-containing oxidoreductase isoform 2

Referenced in:

Alcohol and Aldehyde Dehydrogenases
WW Domain

Other entries for this name:
alt prot [36aa] WW domain-containing oxidoreductase isoform 3
alt prot [414aa] WW domain-containing oxidoreductase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         15           2
 C cysteine            1.1          2           1
 D aspartate           6.9         13           2
 E glutamate           8.5         16           2
 F phenylalanine       3.7          7           2
 G glycine             7.4         14           1
 H histidine           3.7          7           1
 I isoleucine          3.7          7           1
 K lysine              6.9         13           1
 L leucine             5.3         10           1
 M methionine          1.6          3           1
 N asparagine          3.2          6           1
 P proline             5.3         10           3
 Q glutamine           2.6          5           1
 R arginine            6.9         13           1
 S serine              3.2          6           1
 T threonine          10.1         19           2
 V valine              5.8         11           4
 W tryptophan          2.6          5           1
 Y tyrosine            3.7          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW domain-containing oxidoreductase isoform 2 
WWOX                  0.896   WW domain-containing oxidoreductase isoform 1 
WWOX                  0.147   WW domain-containing oxidoreductase isoform 3 
ITCH                  0.139   itchy homolog E3 ubiquitin protein ligase 
WWP2                  0.131   WW domain containing E3 ubiquitin protein ligase 2 i...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally dow...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
NEDD4L                0.117   neural precursor cell expressed, developmentally do...
WWP1                  0.117   WW domain containing E3 ubiquitin protein ligase 1 [...
YAP1                  0.115   Yes-associated protein 1, 65kDa isoform 1 
MAGI2                 0.112   membrane associated guanylate kinase, WW and PDZ dom...
WWC2                  0.107   WW and C2 domain containing 2 
NEDD4                 0.107   neural precursor cell expressed, developmentally do...
NEDD4                 0.107   neural precursor cell expressed, developmentally do...
SMURF2                0.101   SMAD specific E3 ubiquitin protein ligase 2 
SMURF1                0.099   Smad ubiquitination regulatory factor 1 isoform 2 [H...
WWC1                  0.099   WW and C2 domain containing 1 isoform 3 
WWC1                  0.099   WW and C2 domain containing 1 isoform 2 
WWC1                  0.099   WW and C2 domain containing 1 isoform 1 
MAGI3                 0.099   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.099   membrane-associated guanylate kinase-related  3 iso...
PLEKHA7               0.091   pleckstrin homology domain containing, family A mem...
SAV1                  0.088   WW45 protein 
RDH12                 0.077   retinol dehydrogenase 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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