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Search of human proteins with 18860888
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18860888 WW domain-containing oxidoreductase isoform 3 [Homo
sapiens]
(36 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18860888 WW domain-containing oxidoreductase isoform 3 [Homo ... 82 9e-17
gi|7706523 WW domain-containing oxidoreductase isoform 1 [Homo s... 80 3e-16
gi|18860884 WW domain-containing oxidoreductase isoform 2 [Homo ... 80 3e-16
gi|114520609 neural precursor cell expressed, developmentally do... 35 0.010
gi|114520607 neural precursor cell expressed, developmentally do... 35 0.010
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi... 31 0.24
gi|40806207 WW domain containing E3 ubiquitin protein ligase 2 i... 30 0.41
gi|5453898 protein (peptidyl-prolyl cis/trans isomerase) NIMA-in... 30 0.53
gi|222352183 neural precursor cell expressed, developmentally do... 29 0.69
gi|21361472 neural precursor cell expressed, developmentally dow... 29 0.69
gi|31317292 Smad ubiquitination regulatory factor 1 isoform 1 [H... 29 0.69
gi|31317290 Smad ubiquitination regulatory factor 1 isoform 2 [H... 29 0.69
gi|222352094 neural precursor cell expressed, developmentally do... 29 0.69
gi|222352092 neural precursor cell expressed, developmentally do... 29 0.69
gi|222352090 neural precursor cell expressed, developmentally do... 29 0.69
gi|222352088 neural precursor cell expressed, developmentally do... 29 0.69
gi|222352086 neural precursor cell expressed, developmentally do... 29 0.69
gi|222352084 neural precursor cell expressed, developmentally do... 29 0.69
gi|222352082 neural precursor cell expressed, developmentally do... 29 0.69
gi|194306653 Yes-associated protein 1, 65kDa isoform 1 [Homo sap... 29 0.69
gi|40806209 WW domain containing E3 ubiquitin protein ligase 2 i... 29 0.90
gi|12232397 SMAD specific E3 ubiquitin protein ligase 2 [Homo sa... 28 1.2
gi|13346498 WW domain containing transcription regulator 1 [Homo... 27 2.6
gi|40806211 WW domain containing E3 ubiquitin protein ligase 2 i... 27 3.4
gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens] 27 3.4
gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens] 27 3.4
gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens] 27 3.4
gi|13654239 WW domain containing E3 ubiquitin protein ligase 1 [... 27 3.4
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 27 4.5
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 26 5.9
>gi|18860888 WW domain-containing oxidoreductase isoform 3 [Homo
sapiens]
Length = 36
Score = 82.0 bits (201), Expect = 9e-17
Identities = 36/36 (100%), Positives = 36/36 (100%)
Query: 1 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYAK 36
MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYAK
Sbjct: 1 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYAK 36
>gi|7706523 WW domain-containing oxidoreductase isoform 1 [Homo
sapiens]
Length = 414
Score = 80.1 bits (196), Expect = 3e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 1 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYA 35
MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYA
Sbjct: 1 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYA 35
>gi|18860884 WW domain-containing oxidoreductase isoform 2 [Homo
sapiens]
Length = 189
Score = 80.1 bits (196), Expect = 3e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 1 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYA 35
MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYA
Sbjct: 1 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYA 35
>gi|114520609 neural precursor cell expressed, developmentally
down-regulated 4 isoform 1 [Homo sapiens]
Length = 900
Score = 35.4 bits (80), Expect = 0.010
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 9 LDDTDSEDELPPGWEERTTKDGWVYY 34
LD ++ LPPGWEERT DG ++Y
Sbjct: 466 LDTSNDLGPLPPGWEERTHTDGRIFY 491
Score = 27.3 bits (59), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 9 LDDTDSEDELPPGWEERTTKDGWVYY 34
L LPPGWEER G YY
Sbjct: 184 LQQQQEPSPLPPGWEERQDILGRTYY 209
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ + G YY
Sbjct: 350 LPPGWEEKQDERGRSYY 366
>gi|114520607 neural precursor cell expressed, developmentally
down-regulated 4 isoform 2 [Homo sapiens]
Length = 1247
Score = 35.4 bits (80), Expect = 0.010
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 9 LDDTDSEDELPPGWEERTTKDGWVYY 34
LD ++ LPPGWEERT DG ++Y
Sbjct: 813 LDTSNDLGPLPPGWEERTHTDGRIFY 838
Score = 27.3 bits (59), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 9 LDDTDSEDELPPGWEERTTKDGWVYY 34
L LPPGWEER G YY
Sbjct: 531 LQQQQEPSPLPPGWEERQDILGRTYY 556
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ + G YY
Sbjct: 697 LPPGWEEKQDERGRSYY 713
>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
sapiens]
Length = 862
Score = 30.8 bits (68), Expect = 0.24
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWE+RT +G VY+
Sbjct: 399 LPPGWEKRTDSNGRVYF 415
Score = 30.4 bits (67), Expect = 0.31
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWE+R + G VYY
Sbjct: 287 LPPGWEQRVDQHGRVYY 303
Score = 30.0 bits (66), Expect = 0.41
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 13 DSEDELPPGWEERTTKDGWVYY 34
D + LPPGWE R G +YY
Sbjct: 314 DRPEPLPPGWERRVDNMGRIYY 335
Score = 26.6 bits (57), Expect = 4.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 14 SEDELPPGWEERTTKDGWVYY 34
+E LP GWE R T DG Y+
Sbjct: 435 NEKPLPEGWEMRFTVDGIPYF 455
>gi|40806207 WW domain containing E3 ubiquitin protein ligase 2
isoform 1 [Homo sapiens]
Length = 870
Score = 30.0 bits (66), Expect = 0.41
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 12 TDSEDELPPGWEERTTKDGWVYY 34
T E LPPGWE+RT G YY
Sbjct: 326 TTWERPLPPGWEKRTDPRGRFYY 348
Score = 28.9 bits (63), Expect = 0.90
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 16 DELPPGWEERTTKDGWVYY 34
D LP GWE+R +G VYY
Sbjct: 300 DALPAGWEQRELPNGRVYY 318
Score = 26.9 bits (58), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 11 DTDSEDELPPGWEERTTKDGWVYY 34
D D LPPGWE+R +G VYY
Sbjct: 400 DHDPLGPLPPGWEKR-QDNGRVYY 422
Score = 26.9 bits (58), Expect = 3.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 15 EDELPPGWEERTTKDGWVYY 34
E LPPGWE + T +G Y+
Sbjct: 443 EPALPPGWEMKYTSEGVRYF 462
>gi|5453898 protein (peptidyl-prolyl cis/trans isomerase)
NIMA-interacting 1 [Homo sapiens]
Length = 163
Score = 29.6 bits (65), Expect = 0.53
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 15 EDELPPGWEERTTK-DGWVYY 34
E++LPPGWE+R ++ G VYY
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYY 24
>gi|222352183 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 429 LPPGWEERIHLDGRTFY 445
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 74 LPPGWEEKVDNLGRTYY 90
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 266 LPSGWEERKDAKGRTYY 282
>gi|21361472 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 3 [Homo sapiens]
Length = 955
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 530 LPPGWEERIHLDGRTFY 546
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 195 LPPGWEEKVDNLGRTYY 211
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 367 LPSGWEERKDAKGRTYY 383
>gi|31317292 Smad ubiquitination regulatory factor 1 isoform 1 [Homo
sapiens]
Length = 757
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 13 DSEDELPPGWEERTTKDGWVYY 34
D LPPGWE R+T G +Y+
Sbjct: 303 DELGPLPPGWEVRSTVSGRIYF 324
Score = 28.1 bits (61), Expect = 1.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 17 ELPPGWEERTTKDGWVYY 34
ELP G+E+RTT G VY+
Sbjct: 235 ELPEGYEQRTTVQGQVYF 252
>gi|31317290 Smad ubiquitination regulatory factor 1 isoform 2 [Homo
sapiens]
Length = 731
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 13 DSEDELPPGWEERTTKDGWVYY 34
D LPPGWE R+T G +Y+
Sbjct: 277 DELGPLPPGWEVRSTVSGRIYF 298
Score = 28.1 bits (61), Expect = 1.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 17 ELPPGWEERTTKDGWVYY 34
ELP G+E+RTT G VY+
Sbjct: 235 ELPEGYEQRTTVQGQVYF 252
>gi|222352094 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 409 LPPGWEERIHLDGRTFY 425
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 74 LPPGWEEKVDNLGRTYY 90
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 246 LPSGWEERKDAKGRTYY 262
>gi|222352092 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 409 LPPGWEERIHLDGRTFY 425
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 74 LPPGWEEKVDNLGRTYY 90
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 246 LPSGWEERKDAKGRTYY 262
>gi|222352090 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 5 [Homo sapiens]
Length = 947
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 522 LPPGWEERIHLDGRTFY 538
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 187 LPPGWEEKVDNLGRTYY 203
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 359 LPSGWEERKDAKGRTYY 375
>gi|222352088 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 4 [Homo sapiens]
Length = 967
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 542 LPPGWEERIHLDGRTFY 558
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 187 LPPGWEEKVDNLGRTYY 203
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 379 LPSGWEERKDAKGRTYY 395
>gi|222352086 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 1 [Homo sapiens]
Length = 975
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 550 LPPGWEERIHLDGRTFY 566
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 195 LPPGWEEKVDNLGRTYY 211
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 387 LPSGWEERKDAKGRTYY 403
>gi|222352084 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 429 LPPGWEERIHLDGRTFY 445
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 74 LPPGWEEKVDNLGRTYY 90
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 266 LPSGWEERKDAKGRTYY 282
>gi|222352082 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 29.3 bits (64), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEER DG +Y
Sbjct: 429 LPPGWEERIHLDGRTFY 445
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWEE+ G YY
Sbjct: 74 LPPGWEEKVDNLGRTYY 90
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEER G YY
Sbjct: 266 LPSGWEERKDAKGRTYY 282
>gi|194306653 Yes-associated protein 1, 65kDa isoform 1 [Homo
sapiens]
Length = 504
Score = 29.3 bits (64), Expect = 0.69
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWE+ T+DG +YY
Sbjct: 232 LPDGWEQAMTQDGEIYY 248
>gi|40806209 WW domain containing E3 ubiquitin protein ligase 2
isoform 3 [Homo sapiens]
Length = 335
Score = 28.9 bits (63), Expect = 0.90
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 16 DELPPGWEERTTKDGWVYY 34
D LP GWE+R +G VYY
Sbjct: 300 DALPAGWEQRELPNGRVYY 318
>gi|12232397 SMAD specific E3 ubiquitin protein ligase 2 [Homo
sapiens]
Length = 748
Score = 28.5 bits (62), Expect = 1.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 15 EDELPPGWEERTTKDGWVYY 34
+++LP GWEER T G + Y
Sbjct: 156 DNDLPDGWEERRTASGRIQY 175
Score = 28.5 bits (62), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 18 LPPGWEERTTKDGWVYY 34
LPPGWE R T G VY+
Sbjct: 299 LPPGWEIRNTATGRVYF 315
Score = 28.1 bits (61), Expect = 1.5
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 17 ELPPGWEERTTKDGWVYY 34
+LP G+E+RTT+ G VY+
Sbjct: 252 DLPEGYEQRTTQQGQVYF 269
>gi|13346498 WW domain containing transcription regulator 1 [Homo
sapiens]
Length = 400
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 AALRYAGLDDTDSEDELPPGWEERTTKDGWVYY 34
A LR D TD E LPPGWE T G Y+
Sbjct: 111 AHLRQQSYDVTD-ELPLPPGWEMTFTATGQRYF 142
>gi|40806211 WW domain containing E3 ubiquitin protein ligase 2
isoform 2 [Homo sapiens]
Length = 431
Score = 26.9 bits (58), Expect = 3.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 15 EDELPPGWEERTTKDGWVYY 34
E LPPGWE + T +G Y+
Sbjct: 4 EPALPPGWEMKYTSEGVRYF 23
>gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo
sapiens]
Length = 1113
Score = 26.9 bits (58), Expect = 3.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEE DG VYY
Sbjct: 8 LPEGWEEARDFDGKVYY 24
>gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo
sapiens]
Length = 1118
Score = 26.9 bits (58), Expect = 3.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEE DG VYY
Sbjct: 8 LPEGWEEARDFDGKVYY 24
>gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo
sapiens]
Length = 1119
Score = 26.9 bits (58), Expect = 3.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 18 LPPGWEERTTKDGWVYY 34
LP GWEE DG VYY
Sbjct: 8 LPEGWEEARDFDGKVYY 24
>gi|13654239 WW domain containing E3 ubiquitin protein ligase 1
[Homo sapiens]
Length = 922
Score = 26.9 bits (58), Expect = 3.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 14 SEDELPPGWEERTTKDGWVYY 34
+E+ LP GWE R T++G Y+
Sbjct: 494 NEEPLPEGWEIRYTREGVRYF 514
Score = 26.6 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 11 DTDSEDELPPGWEERTTKDGWVYY 34
+ D LPPGWE+R VY+
Sbjct: 451 ENDPYGPLPPGWEKRVDSTDRVYF 474
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 26.6 bits (57), Expect = 4.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 10 DDTDSEDELPPGWEERTTKDGWVYY 34
+D + D LP WE T+ G VY+
Sbjct: 296 EDNEEPDPLPDNWEMAYTEKGEVYF 320
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 2 AALRYAGLDDTDSEDELPPGWEERTTKD 29
A R+AG ++ + P WE RT KD
Sbjct: 595 AGPRHAGSVKPEASEAFPGAWENRTRKD 622
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.133 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,699,330
Number of Sequences: 37866
Number of extensions: 37170
Number of successful extensions: 204
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 114
Number of HSP's gapped (non-prelim): 93
length of query: 36
length of database: 18,247,518
effective HSP length: 11
effective length of query: 25
effective length of database: 17,830,992
effective search space: 445774800
effective search space used: 445774800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.