Guide to the Human Genome
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Name: WWC1 Sequence: fasta or formatted (1113aa) NCBI GI: 29789058
Description:

WW and C2 domain containing 1 isoform 3

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
WW Domain

Other entries for this name:
alt prot [1119aa] WW and C2 domain containing 1 isoform 1
alt prot [1118aa] WW and C2 domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         80           3
 C cysteine            1.3         14           1
 D aspartate           5.6         62           2
 E glutamate          10.0        111           6
 F phenylalanine       2.5         28           2
 G glycine             4.6         51           3
 H histidine           1.4         16           1
 I isoleucine          3.0         33           2
 K lysine              6.6         74           2
 L leucine            11.1        124           3
 M methionine          1.8         20           2
 N asparagine          2.1         23           2
 P proline             4.5         50           2
 Q glutamine           6.0         67           3
 R arginine            7.2         80           2
 S serine             11.3        126           5
 T threonine           5.4         60           2
 V valine              5.1         57           2
 W tryptophan          1.2         13           1
 Y tyrosine            2.2         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW and C2 domain containing 1 isoform 3 
WWC1                  0.997   WW and C2 domain containing 1 isoform 1 
WWC1                  0.994   WW and C2 domain containing 1 isoform 2 
WWC2                  0.453   WW and C2 domain containing 2 
WWC3                  0.317   WWC family member 3 
MAGI1                 0.030   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.030   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.030   membrane associated guanylate kinase, WW and PDZ dom...
MAGI2                 0.028   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.028   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.028   membrane-associated guanylate kinase-related  3 iso...
WWP2                  0.024   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP1                  0.022   WW domain containing E3 ubiquitin protein ligase 1 [...
YAP1                  0.021   Yes-associated protein 1, 65kDa isoform 1 
ITCH                  0.020   itchy homolog E3 ubiquitin protein ligase 
NEDD4                 0.020   neural precursor cell expressed, developmentally do...
NEDD4                 0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally dow...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
NEDD4L                0.020   neural precursor cell expressed, developmentally do...
PLEKHA7               0.018   pleckstrin homology domain containing, family A mem...
WWOX                  0.017   WW domain-containing oxidoreductase isoform 1 
WWOX                  0.017   WW domain-containing oxidoreductase isoform 2 
SAV1                  0.017   WW45 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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