LOC100129979 8567

Name: LOC100129979	Sequence: fasta or formatted (347aa)		NCBI GI: 169208152
Description: PREDICTED: similar to FLJ00287 protein		Not currently referenced in the text
Other entries for this name: alt prot {205aa} PREDICTED: similar to FLJ00287 protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 27 2 C cysteine 3.2 11 2 D aspartate 2.6 9 2 E glutamate 3.5 12 1 F phenylalanine 2.9 10 1 G glycine 10.1 35 3 H histidine 3.2 11 1 I isoleucine 1.4 5 1 K lysine 3.2 11 1 L leucine 10.4 36 2 M methionine 1.7 6 1 N asparagine 0.3 1 1 P proline 15.0 52 2 Q glutamine 4.3 15 1 R arginine 5.8 20 2 S serine 11.5 40 2 T threonine 2.9 10 1 V valine 5.5 19 2 W tryptophan 3.7 13 1 Y tyrosine 1.2 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to FLJ00287 protein LOC100129979 0.520 PREDICTED: similar to FLJ00287 protein LOC100132024 0.501 PREDICTED: similar to FLJ00287 protein FMNL2 0.032 formin-like 2 FLJ22184 0.029 PREDICTED: hypothetical protein FLJ22184 ZNF385C 0.024 PREDICTED: zinc finger protein 385C LOC100291797 0.024 PREDICTED: hypothetical protein XP_002345651 ZNF385C 0.024 PREDICTED: zinc finger protein 385C LOC100291443 0.024 PREDICTED: hypothetical protein XP_002346504 ZNF385C 0.024 PREDICTED: zinc finger protein 385C LOC100289394 0.024 PREDICTED: hypothetical protein XP_002342316 SYNPO 0.024 synaptopodin isoform A RXRB 0.024 retinoid X receptor, beta CPSF6 0.024 cleavage and polyadenylation specific factor 6, 68 ... GLTSCR1 0.024 glioma tumor suppressor candidate region gene 1 [Ho... MBD6 0.024 methyl-CpG binding domain protein 6 HES7 0.022 hairy and enhancer of split 7 KIAA0754 0.022 hypothetical protein LOC643314 POLR2A 0.021 DNA-directed RNA polymerase II A ZFHX3 0.021 AT-binding transcription factor 1 LMTK3 0.019 lemur tyrosine kinase 3 KIAA0947 0.019 hypothetical protein LOC23379 FLJ22184 0.019 PREDICTED: hypothetical protein FLJ22184 KCNC3 0.019 Shaw-related voltage-gated potassium channel protein... PCLO 0.019 piccolo isoform 2 PCLO 0.019 piccolo isoform 1 PTPN23 0.019 protein tyrosine phosphatase, non-receptor type 23 [... WBP11 0.019 WW domain binding protein 11 TCERG1L 0.019 transcription elongation regulator 1-like FLJ22184 0.019 PREDICTED: hypothetical protein LOC80164 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.