PCLO 5048

Name: PCLO	Sequence: fasta or formatted (5142aa)		NCBI GI: 150378539
Description: piccolo isoform 1		Referenced in: Protein Composition and Structure Synapses
Other entries for this name: alt prot [4935aa] piccolo isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 307 6 C cysteine 0.6 32 2 D aspartate 4.9 253 2 E glutamate 8.0 410 4 F phenylalanine 1.9 98 2 G glycine 5.3 271 4 H histidine 1.9 97 2 I isoleucine 4.6 239 2 K lysine 7.9 405 3 L leucine 6.7 343 3 M methionine 1.8 91 2 N asparagine 1.5 75 2 P proline 10.6 546 22 Q glutamine 6.9 356 4 R arginine 3.9 203 4 S serine 12.3 630 5 T threonine 8.0 411 3 V valine 4.9 254 3 W tryptophan 0.3 16 1 Y tyrosine 2.0 105 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 piccolo isoform 1 PCLO 0.959 piccolo isoform 2 BSN 0.070 bassoon protein NACA 0.019 nascent polypeptide-associated complex alpha subuni... PRG4 0.015 proteoglycan 4 isoform D PRG4 0.015 proteoglycan 4 isoform C PRG4 0.015 proteoglycan 4 isoform B PRG4 0.015 proteoglycan 4 isoform A MLL2 0.013 myeloid/lymphoid or mixed-lineage leukemia 2 TTN 0.013 titin isoform N2-A FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 SRRM2 0.012 splicing coactivator subunit SRm300 RIMS2 0.012 regulating synaptic membrane exocytosis 2 isoform a... RIMS1 0.011 regulating synaptic membrane exocytosis 1 MUC2 0.011 mucin 2 precursor RIMS2 0.011 regulating synaptic membrane exocytosis 2 isoform b... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform d... NEFH 0.011 neurofilament, heavy polypeptide 200kDa PRB2 0.011 proline-rich protein BstNI subfamily 2 TCOF1 0.010 Treacher Collins-Franceschetti syndrome 1 isoform a ... FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.010 PREDICTED: hypothetical protein LOC80164 TCOF1 0.010 Treacher Collins-Franceschetti syndrome 1 isoform e... RAPH1 0.010 Ras association and pleckstrin homology domains 1 is... MAP1B 0.010 microtubule-associated protein 1B MUC17 0.009 mucin 17 PRB1 0.009 proline-rich protein BstNI subfamily 1 isoform 1 pre... BRD4 0.009 bromodomain-containing protein 4 isoform long GLTSCR1 0.009 glioma tumor suppressor candidate region gene 1 [Ho... RERE 0.009 atrophin-1 like protein isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.