MBD6 30352

Name: MBD6	Sequence: fasta or formatted (1003aa)		NCBI GI: 46852161
Description: methyl-CpG binding domain protein 6		Referenced in: DNA Methylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 91 3 C cysteine 1.2 12 1 D aspartate 2.0 20 1 E glutamate 3.7 37 2 F phenylalanine 1.9 19 1 G glycine 11.6 116 4 H histidine 1.8 18 2 I isoleucine 0.9 9 1 K lysine 1.7 17 1 L leucine 12.6 126 2 M methionine 0.9 9 1 N asparagine 2.3 23 2 P proline 21.3 214 5 Q glutamine 3.0 30 1 R arginine 5.9 59 3 S serine 12.1 121 3 T threonine 4.0 40 2 V valine 3.3 33 2 W tryptophan 0.4 4 1 Y tyrosine 0.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 methyl-CpG binding domain protein 6 MBD5 0.073 methyl-CpG binding domain protein 5 FLJ22184 0.066 PREDICTED: hypothetical protein FLJ22184 NACA 0.060 nascent polypeptide-associated complex alpha subuni... FMN2 0.058 formin 2 MLL2 0.054 myeloid/lymphoid or mixed-lineage leukemia 2 FLJ22184 0.054 PREDICTED: hypothetical protein LOC80164 FLJ22184 0.053 PREDICTED: hypothetical protein FLJ22184 COL4A5 0.048 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.048 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.047 type IV collagen alpha 5 isoform 1 precursor SRCAP 0.045 Snf2-related CBP activator protein CIC 0.044 capicua homolog COL1A1 0.040 alpha 1 type I collagen preproprotein ATN1 0.040 atrophin-1 ATN1 0.040 atrophin-1 KIAA1522 0.040 hypothetical protein LOC57648 RAPH1 0.039 Ras association and pleckstrin homology domains 1 is... COL27A1 0.038 collagen, type XXVII, alpha 1 COL3A1 0.038 collagen type III alpha 1 preproprotein RERE 0.038 atrophin-1 like protein isoform b RERE 0.038 atrophin-1 like protein isoform a RERE 0.038 atrophin-1 like protein isoform a C6orf132 0.037 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.037 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.037 PREDICTED: hypothetical protein LOC647024 PRR12 0.037 proline rich 12 GLTSCR1 0.037 glioma tumor suppressor candidate region gene 1 [Ho... WNK2 0.037 WNK lysine deficient protein kinase 2 KDM6B 0.036 lysine (K)-specific demethylase 6B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.