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Search of human proteins with 169204828
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169204828 PREDICTED: hypothetical protein [Homo sapiens]
(219 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169204828 PREDICTED: hypothetical protein [Homo sapiens] 468 e-132
gi|169205567 PREDICTED: hypothetical protein [Homo sapiens] 468 e-132
gi|169204182 PREDICTED: hypothetical protein [Homo sapiens] 464 e-131
gi|122937285 immunoglobulin superfamily 5 like [Homo sapiens] 43 2e-04
gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo sa... 41 0.001
gi|27735107 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [H... 40 0.001
gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho... 40 0.001
gi|60099478 keratin associated protein 5-6 [Homo sapiens] 40 0.002
gi|110611906 solute carrier family 34 (sodium phosphate), member... 40 0.002
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 39 0.003
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 39 0.003
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 39 0.003
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 39 0.005
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 38 0.006
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 38 0.008
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 37 0.010
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 37 0.010
gi|39752687 hypothetical protein LOC375791 [Homo sapiens] 37 0.017
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 37 0.017
gi|86990435 G protein signalling regulator 19 [Homo sapiens] 37 0.017
gi|5031705 G protein signalling regulator 19 [Homo sapiens] 37 0.017
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 37 0.017
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 36 0.022
gi|21361405 regulator of G-protein signalling 17 [Homo sapiens] 35 0.050
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 35 0.050
gi|4502873 chloride channel 6 isoform ClC-6a [Homo sapiens] 35 0.065
gi|12025673 chloride channel 6 isoform ClC-6d [Homo sapiens] 35 0.065
gi|12025668 chloride channel 6 isoform ClC-6b [Homo sapiens] 35 0.065
gi|12025671 chloride channel 6 isoform ClC-6c [Homo sapiens] 35 0.065
gi|13654235 regulator of G-protein signaling 20 isoform b [Homo ... 34 0.11
>gi|169204828 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 468 bits (1205), Expect = e-132
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP
Sbjct: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
Query: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV
Sbjct: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
Query: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSP 180
FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSP
Sbjct: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSP 180
Query: 181 SSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
SSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA
Sbjct: 181 SSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
>gi|169205567 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 468 bits (1205), Expect = e-132
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP
Sbjct: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
Query: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV
Sbjct: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
Query: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSP 180
FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSP
Sbjct: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSP 180
Query: 181 SSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
SSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA
Sbjct: 181 SSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
>gi|169204182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 464 bits (1193), Expect = e-131
Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 1/220 (0%)
Query: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP
Sbjct: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
Query: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV
Sbjct: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
Query: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCC-CCCCCCCWCCSCLGGISSS 179
FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCC CCCCCCCWCCSCLGGISSS
Sbjct: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
Query: 180 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA
Sbjct: 181 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 220
>gi|122937285 immunoglobulin superfamily 5 like [Homo sapiens]
Length = 407
Score = 42.7 bits (99), Expect = 2e-04
Identities = 53/186 (28%), Positives = 72/186 (38%), Gaps = 32/186 (17%)
Query: 6 AYGSKLIAGRSQLPSPRPLSFHEE--SFLLLPTHYPRDPLLGSASAGTLPCLARELPLSG 63
AY + + G +PS + E LP+H+ R LP ++ EL L
Sbjct: 134 AYLTVQVMGELFIPSVNLVVAENEPCEVTCLPSHWTR-----------LPDISWELGLLV 182
Query: 64 RVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPL------RSTQ 117
P P L+ + I A P S G ++ ++ K + L + T
Sbjct: 183 SHSSYYFVPEPSDLQSAVSILALTPQSNGTLTCVATWKSLKARKSATVNLTVIRCPQDTG 242
Query: 118 STVFMLEKCSSLSLTGGSRLATAGPLGWDGSAGPC---PGC-----CCCC---CCCCCCC 166
+ + SSL G S L T G +G G AG P C CCCC CC C CC
Sbjct: 243 GGINIPGVLSSLPSLGFS-LPTWGKVGL-GLAGTMLLTPTCTLTIRCCCCRRRCCGCNCC 300
Query: 167 CWCCSC 172
C CC C
Sbjct: 301 CRCCFC 306
Score = 37.4 bits (85), Expect = 0.010
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 5/21 (23%)
Query: 155 CCCC---CCCCCCC--CCWCC 170
CCCC CC C CC CC+CC
Sbjct: 287 CCCCRRRCCGCNCCCRCCFCC 307
>gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo
sapiens]
Length = 198
Score = 40.8 bits (94), Expect = 0.001
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 152 CPGCCCCCCCCCCCCCWCCSC 172
C CC CCCC CCC+ C C
Sbjct: 113 CGLLTCCYCCCCLCCCFNCCC 133
Score = 39.7 bits (91), Expect = 0.002
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 152 CPGCCCCCCCCCCCCCWCC 170
C CCCC CCC CCC C
Sbjct: 118 CCYCCCCLCCCFNCCCGKC 136
Score = 34.3 bits (77), Expect = 0.085
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 159 CCCCCCCCCWCCSCLGG 175
CC CCCC C C +C G
Sbjct: 118 CCYCCCCLCCCFNCCCG 134
>gi|27735107 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [Homo
sapiens]
Length = 189
Score = 40.4 bits (93), Expect = 0.001
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 159 CCCCCCCCCWCCSCL 173
CCC CCCCC+CC L
Sbjct: 136 CCCFCCCCCFCCGAL 150
Score = 37.7 bits (86), Expect = 0.008
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 155 CCCCCCCCCCCC 166
CCC CCCCC CC
Sbjct: 136 CCCFCCCCCFCC 147
Score = 37.7 bits (86), Expect = 0.008
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 156 CCCCCCCCCCCC 167
CCC CCCCC CC
Sbjct: 136 CCCFCCCCCFCC 147
Score = 36.6 bits (83), Expect = 0.017
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 157 CCCCCCCCCCCWCCSCLGGISSSP 180
C CCC CC CC C G + P
Sbjct: 131 CTLLTCCCFCCCCCFCCGALKPPP 154
>gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Homo
sapiens]
Length = 199
Score = 40.4 bits (93), Expect = 0.001
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 152 CPGCCCCCCCCCCCCCWC 169
C CCC CCCC CCC C
Sbjct: 123 CYFCCCLCCCCNCCCGHC 140
Score = 40.0 bits (92), Expect = 0.002
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 150 GPCPGCCCCCCCCCCCCCWCCSC 172
G GC CCC CCCC C C C
Sbjct: 118 GLLTGCYFCCCLCCCCNCCCGHC 140
Score = 36.2 bits (82), Expect = 0.022
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 156 CCCCCCCCCCCCWCCSCLGGISSSP 180
C CCC CCCC CC SS P
Sbjct: 123 CYFCCCLCCCCNCCCGHCRPESSVP 147
>gi|60099478 keratin associated protein 5-6 [Homo sapiens]
Length = 129
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 126 CSSLSLTGGSRL---ATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
C+S GGS+ + G G GS G G C C C C CC C C G SS
Sbjct: 47 CTSCGSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGCGSS 103
Score = 34.7 bits (78), Expect = 0.065
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSC 172
G GS+ P CCC CCC C C SC
Sbjct: 22 GGCGSSCCVPICCCKPVCCCVPACSCTSC 50
Score = 34.3 bits (77), Expect = 0.085
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 11/43 (25%)
Query: 144 GWDGSAGPCPGC---CC---CCC--CCCC---CCCWCCSCLGG 175
G G C GC CC CCC CCC C C C GG
Sbjct: 13 GCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCTSCGSCGG 55
Score = 31.2 bits (69), Expect = 0.72
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 12/57 (21%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC-----------CCCCCCCCCWCCS 171
C S + G + G G GS G C C CC CC CC CCS
Sbjct: 60 CGSCGGSKGGCGSCGGSKGGCGSCG-CSQCSCCKPCYCSSGCGSSCCQSSCCKPCCS 115
Score = 29.6 bits (65), Expect = 2.1
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 14/46 (30%)
Query: 141 GPLGWDGSAGP-CPGCCC--------CC---CCC--CCCCCWCCSC 172
G G G G C GC CC CCC CCC CSC
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC 47
>gi|110611906 solute carrier family 34 (sodium phosphate), member 2
[Homo sapiens]
Length = 690
Score = 39.7 bits (91), Expect = 0.002
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Query: 145 WDGSAGPCPGC----CCCCC-CCCCCCCWCCSC 172
WD GC CCCCC CC CC C C
Sbjct: 603 WDAVVSKFTGCFQMRCCCCCRVCCRACCLLCGC 635
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 39.3 bits (90), Expect = 0.003
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSC-LGGISS 178
GGS+ G GS+ P CCC CCC C C SC GG S
Sbjct: 113 GGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGS 159
Score = 36.6 bits (83), Expect = 0.017
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 14/61 (22%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGP--------CPGC---CCCCCCCC---CCCCWCCS 171
C S + G + G G GS G C GC CC CCC CCC CS
Sbjct: 89 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACS 148
Query: 172 C 172
C
Sbjct: 149 C 149
Score = 34.7 bits (78), Expect = 0.065
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 133 GGSRLATAGPLGWDGSAGP-CPGCCCCCCCCCCCCCWCCSCLGGISSS 179
GGS+ G G G C GC CC CCC C C+ S S
Sbjct: 103 GGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCS 150
Score = 33.9 bits (76), Expect = 0.11
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSC-LGGISSSPSS 182
G GS+ P CCC CC C C SC GG SS S
Sbjct: 36 GGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGS 75
Score = 33.9 bits (76), Expect = 0.11
Identities = 23/77 (29%), Positives = 26/77 (33%), Gaps = 20/77 (25%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCC-----------------C---CCCCC 165
C S + G+ + G G GS G C G C C C CCC
Sbjct: 157 CGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCS 216
Query: 166 CCWCCSCLGGISSSPSS 182
C C SC G SS
Sbjct: 217 CSSCGSCAGSKGGCGSS 233
Score = 32.7 bits (73), Expect = 0.25
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 17/57 (29%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC--CCC---C---CC---CCCWCCS 171
C S S G + AG G GS+ C C CC CCC C CC CC CCS
Sbjct: 214 CCSCSSCG----SCAGSKGGCGSS--CSQCSCCKPCCCSSGCGSSCCQSSCCKPCCS 264
Score = 32.0 bits (71), Expect = 0.42
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 17/67 (25%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGCCCCCCCC-------------C--CCCC--WCCSCLGG 175
GGS+ G GS P CCC C C C C CC CCS G
Sbjct: 191 GGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSSGCG 250
Query: 176 ISSSPSS 182
S SS
Sbjct: 251 SSCCQSS 257
Score = 31.2 bits (69), Expect = 0.72
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 32/86 (37%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGP--------CPGC--------CCCCCCCC------ 163
C S + G + G G GS G C GC CCC C C
Sbjct: 167 CGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGS 226
Query: 164 ----------CCCCWCCSCLGGISSS 179
C CC C C G SS
Sbjct: 227 KGGCGSSCSQCSCCKPCCCSSGCGSS 252
Score = 28.9 bits (63), Expect = 3.6
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 21/64 (32%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC-------CC---CC-------CCCCCW 168
CSS GS+ G G S C CCC CC CC CC
Sbjct: 217 CSSCGSCAGSK----GGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPV 272
Query: 169 CCSC 172
CC C
Sbjct: 273 CCQC 276
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 38.9 bits (89), Expect = 0.003
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 32/86 (37%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPG------------------CCC-------CC- 159
CSS GGS+ G G G C G CCC CC
Sbjct: 47 CSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQ 106
Query: 160 --CCCCCC----CCWCCSCLGGISSS 179
CC CC CC CSC G SS
Sbjct: 107 SSCCKPCCSQSSCCKPCSCSSGCGSS 132
Score = 34.7 bits (78), Expect = 0.065
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSC 172
G GS+ P CCC CCC C C SC
Sbjct: 22 GGCGSSCCVPICCCKPVCCCVPACSCSSC 50
Score = 34.3 bits (77), Expect = 0.085
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
G G C GC CC CCC C C+ S S
Sbjct: 13 GCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 48
Score = 32.0 bits (71), Expect = 0.42
Identities = 12/28 (42%), Positives = 12/28 (42%)
Query: 152 CPGCCCCCCCCCCCCCWCCSCLGGISSS 179
C CC CC CC C C G SS
Sbjct: 134 CQSSCCKPCCSQSSCCKPCCCSSGCGSS 161
Score = 29.6 bits (65), Expect = 2.1
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 14/46 (30%)
Query: 141 GPLGWDGSAGP-CPGCCC--------CC---CCC--CCCCCWCCSC 172
G G G G C GC CC CCC CCC CSC
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC 47
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 16/37 (43%)
Query: 152 CPGCCC-------CC---CC--CC----CCCCWCCSC 172
C CCC CC CC CC CC CC C
Sbjct: 149 CKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPICCQC 185
Score = 28.5 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Query: 153 PGCCCCCCCCCCCCCWCCSCLGGISSSPSS 182
P CCC C C C C GG S S
Sbjct: 37 PVCCCVPACSCSSCGSCGGSKGGRGSCGGS 66
Score = 27.7 bits (60), Expect = 8.0
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 15/35 (42%)
Query: 152 CPGCC----CC--CCC-------CC--CCCCWCCS 171
C CC CC CCC CC CC CCS
Sbjct: 139 CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCS 173
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 38.9 bits (89), Expect = 0.003
Identities = 20/54 (37%), Positives = 22/54 (40%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
C S + G + G G GS G G C C C C CC C C G SS
Sbjct: 161 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSS 214
Score = 38.1 bits (87), Expect = 0.006
Identities = 30/79 (37%), Positives = 32/79 (40%), Gaps = 16/79 (20%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGC--CCCC--CCC-------CC---CCCWCCSCLG-GIS 177
GGS+ G G G C GC C CC CCC CC CC CCS G G S
Sbjct: 175 GGSKGGCGSCGGSKGGCGSC-GCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSS 233
Query: 178 SSPSSVRMQHFFFQSCNNP 196
SS + SC P
Sbjct: 234 CCQSSCCKPYCCQSSCCKP 252
Score = 34.7 bits (78), Expect = 0.065
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSC 172
G GS+ P CCC CCC C C SC
Sbjct: 43 GGCGSSCCVPICCCKPVCCCVPACSCSSC 71
Score = 34.3 bits (77), Expect = 0.085
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
G G C GC CC CCC C C+ S S
Sbjct: 34 GCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 69
Score = 32.3 bits (72), Expect = 0.32
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 15/61 (24%)
Query: 148 SAGPCPGCCCCCCCC---CC---CCCWCCSCLGGISSSPSSVRMQHFFFQSCNNPSLRFS 201
S+ C CC CC CC CC CCS G SS S SC NP S
Sbjct: 226 SSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQS---------SCCNPCCSQS 276
Query: 202 S 202
S
Sbjct: 277 S 277
Score = 30.0 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 13/42 (30%)
Query: 144 GWDGSAGPCPGCCC--------CC---CCC--CCCCCWCCSC 172
G G C GC CC CCC CCC CSC
Sbjct: 27 GCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC 68
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 7/32 (21%)
Query: 148 SAGPCPGCCC---CCCCCC----CCCCWCCSC 172
S+ C CC CC CC CC CC C
Sbjct: 255 SSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 286
Score = 29.3 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Query: 153 PGCCCCCCCCCCCCCWCCSCLGGISSSPSS 182
P CCC C C C C GG S S
Sbjct: 58 PVCCCVPACSCSSCGSCGGSKGGYGSCGGS 87
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 38.5 bits (88), Expect = 0.005
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 11/36 (30%)
Query: 150 GPCPGCCCCCC-----CC--CCC---CCWCC-SCLG 174
G CPG C CC CC CCC CC CC SC G
Sbjct: 2 GCCPGDCFTCCTQEQNCCEECCCQPGCCGCCGSCCG 37
Score = 32.7 bits (73), Expect = 0.25
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSPSSV 183
G G G C G CC CC CC C G + P+ +
Sbjct: 63 GGCGGCGGCGGGCCGSSCCGSSCCG-SGCCGPVCCQPTPI 101
Score = 30.8 bits (68), Expect = 0.94
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Query: 152 CPGCCC---CCCCC-CCCCCWCCSCLG 174
C CCC CC CC CC C C G
Sbjct: 19 CEECCCQPGCCGCCGSCCGCGGSGCGG 45
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 13/36 (36%)
Query: 153 PGCCCCCCCCCCC-------------CCWCCSCLGG 175
PGCC CC CC C CC C G
Sbjct: 26 PGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSG 61
Score = 29.3 bits (64), Expect = 2.7
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 13/57 (22%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCC---CCCCCWCCSCLGGISSS 179
C S GGS +G C G CC CC C C C C GG S
Sbjct: 32 CGSCCGCGGSGCGGSG----------CGGSCCGSSCCGSGCGGCGGCGGCGGGCCGS 78
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 38.1 bits (87), Expect = 0.006
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 133 GGSRLATAGPLGWDGSAGPC--PGCCCCCCCCCCCCCWCCSC-LGGISSSPSSVR 184
GG +G G G C P CCC CCC C C SC GG S S R
Sbjct: 43 GGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKR 97
Score = 34.7 bits (78), Expect = 0.065
Identities = 28/83 (33%), Positives = 30/83 (36%), Gaps = 29/83 (34%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGP-----CPGCCC------------CC---CC---C 162
C S + G + G G GS G C CCC CC CC C
Sbjct: 129 CGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGCGSSCCQSSCCKPYCCQSSC 188
Query: 163 C---CC---CCWCCSCLGGISSS 179
C CC CC CSC G SS
Sbjct: 189 CKPYCCQSSCCKPCSCFSGCGSS 211
Score = 33.5 bits (75), Expect = 0.14
Identities = 16/47 (34%), Positives = 17/47 (36%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
GG G G C GC CC CCC C C+ S S
Sbjct: 36 GGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCS 82
Score = 30.8 bits (68), Expect = 0.94
Identities = 18/54 (33%), Positives = 20/54 (37%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
C S + G + G G GS G G C C CC C C G SS
Sbjct: 119 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGCGSS 172
Score = 30.0 bits (66), Expect = 1.6
Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 7/28 (25%)
Query: 152 CPGCCC-------CCCCCCCCCCWCCSC 172
C CC CCC CC CC C
Sbjct: 208 CGSSCCQSSCYKPCCCQSSCCVPVCCQC 235
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 37.7 bits (86), Expect = 0.008
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSSPSSVRM 185
C S + G + G G GS G G C C C C CC C C G S S
Sbjct: 104 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQS--- 160
Query: 186 QHFFFQSCNNP 196
SC NP
Sbjct: 161 ------SCCNP 165
Score = 35.0 bits (79), Expect = 0.050
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCC---CCCWCCSCLGG 175
G+ G C CC CCC CCC C C C GG
Sbjct: 30 GYGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGG 69
Score = 33.9 bits (76), Expect = 0.11
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
G G C GC CC CCC C C+ S S
Sbjct: 27 GCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPACSCS 62
Score = 32.3 bits (72), Expect = 0.32
Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 152 CPGCCC--CCCCCCCCCCWCCSC 172
C CC CCC CC CC C
Sbjct: 178 CQSSCCKPCCCQSSCCVPVCCQC 200
Score = 32.0 bits (71), Expect = 0.42
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 13/61 (21%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGP-----CPGCCCC-----CC---CCCCCCCWCCSC 172
C S + G + G G GS G C CCC CC CC CCC C
Sbjct: 114 CGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCC 173
Query: 173 L 173
+
Sbjct: 174 V 174
Score = 29.6 bits (65), Expect = 2.1
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 6/25 (24%)
Query: 152 CPGCC---CCCCCCC---CCCCWCC 170
C CC CC CCC CC CC
Sbjct: 154 CGSCCQSSCCNPCCCQSSCCVPVCC 178
Score = 28.5 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 6/27 (22%)
Query: 152 CPGCCCCCCCCC---CC---CCWCCSC 172
C CCC CC CC CC C C
Sbjct: 162 CCNPCCCQSSCCVPVCCQSSCCKPCCC 188
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 37.4 bits (85), Expect = 0.010
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 97 ISLPSAITTVKYMYLPLRSTQSTVFMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCC 156
++ S+ T P S T ++ GG +AG G G+ G
Sbjct: 111 VAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGS---GAS 167
Query: 157 CCCCCCCCCC 166
CC CCCCC C
Sbjct: 168 CCPCCCCCGC 177
Score = 33.9 bits (76), Expect = 0.11
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 115 STQSTVFMLEKCSSLSLTGGSRLATAGPLGWDGS-----AGPCPGCCCCCCCCCCCCCWC 169
++ ST CS + G A AG +G GS AG CC CCCCC C
Sbjct: 119 TSSSTSTPTSSCSMTAADFGGG-AAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGC 177
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 37.4 bits (85), Expect = 0.010
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 126 CSSLSLTGGSRL---ATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
CSS GGS+ + G G GS G G C C C C C C C G SS
Sbjct: 54 CSSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSS 110
Score = 36.6 bits (83), Expect = 0.017
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 152 CPGCCCCCCCCCCCCCWCCSCLGGISSSPSSVRMQHFFFQSCNNPSLRFSS 202
C CC CCC CC C C G SS SC NP SS
Sbjct: 112 CQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQ--------SSCCNPCCSQSS 154
Score = 35.0 bits (79), Expect = 0.050
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSC 172
G GS+ P CCC CCC C C SC
Sbjct: 29 GGCGSSCCVPVCCCKPVCCCVPACSCSSC 57
Score = 34.7 bits (78), Expect = 0.065
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
C S GS G G G C GC CC CCC C C+ S S
Sbjct: 3 CCGCSEGCGSGCGGCGS-GCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCS 55
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 16/37 (43%)
Query: 152 CPGCCC-------CC---CC--CC----CCCCWCCSC 172
C CCC CC CC CC CC CC C
Sbjct: 127 CKPCCCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 163
Score = 29.3 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Query: 153 PGCCCCCCCCCCCCCWCCSCLGGISSSPSS 182
P CCC C C C C GG S S
Sbjct: 44 PVCCCVPACSCSSCGSCGGSKGGCGSCGGS 73
>gi|39752687 hypothetical protein LOC375791 [Homo sapiens]
Length = 144
Score = 36.6 bits (83), Expect = 0.017
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Query: 155 CCCCCCCCCCCC---CWCCSC 172
CCCC CC CC C C C SC
Sbjct: 118 CCCCPCCHCCHCPPFCRCHSC 138
Score = 34.3 bits (77), Expect = 0.085
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 127 SSLSLTGGSRLATAGPLG-WDGSAGPCPGCCCCCCCCC---CCCCWCCSCL 173
SS G A P+G D A C C CC CC C C C CC C+
Sbjct: 92 SSSQRQAGLTYAGPPPVGRGDDIAHHCCCCPCCHCCHCPPFCRCHSCCCCV 142
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 36.6 bits (83), Expect = 0.017
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 140 AGPLGWDGSAGPCPGCCC---CCCCCCCCCCWCCSC 172
+G G G C CC CCC CCC CSC
Sbjct: 19 SGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC 54
Score = 35.0 bits (79), Expect = 0.050
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSC------LGGISSSPSS 182
G GS+ P CCC CCC C C SC GG S SS
Sbjct: 29 GGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSS 73
Score = 33.9 bits (76), Expect = 0.11
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
G G C GC CC CCC C C+ S S
Sbjct: 20 GSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 55
Score = 32.0 bits (71), Expect = 0.42
Identities = 30/87 (34%), Positives = 33/87 (37%), Gaps = 17/87 (19%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCW-CCSCLGGISSSPSSVR 184
CSS GGS+ G GS G G C C C CC CCS SS S
Sbjct: 54 CSSCGSCGGSK-------GGCGSCGSSKGGCGSCGCSQSNCCKPCCS-----SSGCGSFC 101
Query: 185 MQHFFFQSCNNPSLRFSSTPSFSALQP 211
Q SC+ P SS S +P
Sbjct: 102 CQ----SSCSKPCCCQSSCCQSSCCKP 124
Score = 31.6 bits (70), Expect = 0.55
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 12/33 (36%)
Query: 152 CPGCCCCCCCC-------CCC---CC--WCCSC 172
C CCC CC CCC CC CC C
Sbjct: 122 CKPCCCQSSCCQSSCFKPCCCQSSCCVPVCCQC 154
Score = 28.9 bits (63), Expect = 3.6
Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Query: 152 CPGCCCCCCCC--CCCCCWCC 170
C CC CC CCC CC
Sbjct: 112 CQSSCCQSSCCKPCCCQSSCC 132
>gi|86990435 G protein signalling regulator 19 [Homo sapiens]
Length = 217
Score = 36.6 bits (83), Expect = 0.017
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 149 AGPCPGCCCCCCCCCCCCCW 168
A P CC C CCCC C W
Sbjct: 32 AAPSRNPCCLCWCCCCSCSW 51
Score = 30.0 bits (66), Expect = 1.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 159 CCCCCCCCCWC 169
CC C CCCC C
Sbjct: 39 CCLCWCCCCSC 49
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 148 SAGPCPGCCCCCCCC 162
S PC C CCCC C
Sbjct: 35 SRNPCCLCWCCCCSC 49
Score = 28.9 bits (63), Expect = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 164 CCCCWCCSC 172
CC CWCC C
Sbjct: 39 CCLCWCCCC 47
Score = 28.5 bits (62), Expect = 4.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 162 CCCCCCWCCSC 172
CC C C CCSC
Sbjct: 39 CCLCWCCCCSC 49
Score = 28.1 bits (61), Expect = 6.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 146 DGSAGPCPGCCCCCCCCCCCC 166
D ++ P CC C CCCC
Sbjct: 27 DTASPAAPSRNPCCLCWCCCC 47
Score = 28.1 bits (61), Expect = 6.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 160 CCCCCCCCWCCS 171
CC C CCC CS
Sbjct: 39 CCLCWCCCCSCS 50
>gi|5031705 G protein signalling regulator 19 [Homo sapiens]
Length = 217
Score = 36.6 bits (83), Expect = 0.017
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 149 AGPCPGCCCCCCCCCCCCCW 168
A P CC C CCCC C W
Sbjct: 32 AAPSRNPCCLCWCCCCSCSW 51
Score = 30.0 bits (66), Expect = 1.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 159 CCCCCCCCCWC 169
CC C CCCC C
Sbjct: 39 CCLCWCCCCSC 49
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 148 SAGPCPGCCCCCCCC 162
S PC C CCCC C
Sbjct: 35 SRNPCCLCWCCCCSC 49
Score = 28.9 bits (63), Expect = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 164 CCCCWCCSC 172
CC CWCC C
Sbjct: 39 CCLCWCCCC 47
Score = 28.5 bits (62), Expect = 4.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 162 CCCCCCWCCSC 172
CC C C CCSC
Sbjct: 39 CCLCWCCCCSC 49
Score = 28.1 bits (61), Expect = 6.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 146 DGSAGPCPGCCCCCCCCCCCC 166
D ++ P CC C CCCC
Sbjct: 27 DTASPAAPSRNPCCLCWCCCC 47
Score = 28.1 bits (61), Expect = 6.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 160 CCCCCCCCWCCS 171
CC C CCC CS
Sbjct: 39 CCLCWCCCCSCS 50
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 126 CSSLSLTGGSRL---ATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
C+S GGS+ + G G GS G G C C C CC C C G SS
Sbjct: 75 CTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSS 131
Score = 33.1 bits (74), Expect = 0.19
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 10/55 (18%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCC-------CC---CCCWCC 170
C S + G + G G GS G CC CCC CC CC CC
Sbjct: 88 CGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCC 142
Score = 30.0 bits (66), Expect = 1.6
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 17/38 (44%)
Query: 152 CPGCCC---CCCCCCC-------CCCW-------CCSC 172
C CCC CC CC CCC CC C
Sbjct: 138 CKPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQC 175
Score = 29.6 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 144 GWDGSAGPCPGCCCCC----CCCCCCCCW--CCSC 172
G G + C GC C CCC C W CSC
Sbjct: 41 GCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSC 75
Score = 28.9 bits (63), Expect = 3.6
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 14/39 (35%)
Query: 148 SAGPCPGCC---CC--CCC---CC---CC---CCWCCSC 172
S+G CC CC CCC CC CC CC C C
Sbjct: 125 SSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPCCC 163
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 36.2 bits (82), Expect = 0.022
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Query: 126 CSSLSLTGGSRLATAGPL--GWDGSAGPCPGCCCCCCCCC---CCCCWCCSC 172
CS S GS G G G C CC CCC CCC CSC
Sbjct: 3 CSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSC 54
Score = 36.2 bits (82), Expect = 0.022
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPC----PGCCCCCCCCCCCCCWCCSCLG 174
CSS GGS+ G G G C GC CC CC C SC G
Sbjct: 54 CSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGG 106
Score = 35.4 bits (80), Expect = 0.038
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 144 GWDGSAGPC--PGCCCCCCCCCCCCCWCCSC 172
G+ G C P CCC CCC C C SC
Sbjct: 27 GYGGCGSGCCVPVCCCKPVCCCVPACSCSSC 57
Score = 33.1 bits (74), Expect = 0.19
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 14/42 (33%)
Query: 152 CPGCCC-------CC---CCCCCC----CCWCCSCLGGISSS 179
C CCC CC CC CC CC C C G SS
Sbjct: 171 CKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSS 212
Score = 32.0 bits (71), Expect = 0.42
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 127 SSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCWCC--SCLGGISSSPS 181
SS GGS+ G G G C GC C C CCC C SC PS
Sbjct: 99 SSCGSCGGSKGVCGFRGGSKGGCGSC-GCSQCSCYKPCCCSSGCGSSCCQSSCCKPS 154
Score = 29.6 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 153 PGC----CCCCCCCCCCCCWCCSCLGGISSS 179
P C CC CC CC C C G SS
Sbjct: 153 PSCSQSSCCKPCCSQSSCCKPCCCSSGCGSS 183
Score = 28.1 bits (61), Expect = 6.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
Query: 152 CPGCC----CC--CCCCCCCCCWCC--SCLGGISSSPS 181
C CC CC CCC C CC SC SS S
Sbjct: 190 CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSS 227
>gi|21361405 regulator of G-protein signalling 17 [Homo sapiens]
Length = 210
Score = 35.0 bits (79), Expect = 0.050
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 147 GSAGPCPGCCCCCCCCCCCCC 167
G+ P CC C CCCC C C
Sbjct: 20 GNQRPNNTCCFCWCCCCSCSC 40
Score = 33.9 bits (76), Expect = 0.11
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 153 PGCCCCCCCCCCCCCWC 169
P CC C CCCC C C
Sbjct: 24 PNNTCCFCWCCCCSCSC 40
Score = 32.7 bits (73), Expect = 0.25
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 160 CCCCCCCCWCCSCL 173
CC C CCC CSCL
Sbjct: 28 CCFCWCCCCSCSCL 41
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 35.0 bits (79), Expect = 0.050
Identities = 15/33 (45%), Positives = 15/33 (45%)
Query: 147 GSAGPCPGCCCCCCCCCCCCCWCCSCLGGISSS 179
GS G G C C C C CC C C G SS
Sbjct: 63 GSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSS 95
Score = 34.3 bits (77), Expect = 0.085
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC--CCC----------CCCCCCWC--CS 171
CSS G + G G GS G C C CC CCC C CC +C CS
Sbjct: 54 CSSCGKRGCG--SCGGSKGGCGSCG-CSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCS 110
Query: 172 CLGGISSS 179
C SS
Sbjct: 111 CCKPCCSS 118
Score = 33.9 bits (76), Expect = 0.11
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 152 CPGCCCCCCCC------CCCCCWCCSCLGGISS 178
C CC C CC C CC CCS G SS
Sbjct: 92 CGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSS 124
Score = 33.1 bits (74), Expect = 0.19
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 13/42 (30%)
Query: 144 GWDGSAGPC--------PGCCC---CC--CCCCCCCCWCCSC 172
G D S G C P CC CC CCC C C SC
Sbjct: 16 GCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSC 57
Score = 30.0 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 11/38 (28%)
Query: 152 CPGCCCCCCCC--------CC---CCCWCCSCLGGISS 178
C C CC CC CC CC CCS G SS
Sbjct: 106 CSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSS 143
Score = 28.1 bits (61), Expect = 6.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 147 GSAGPCPGCCCC---CCCCCCCCCWCCSCLGGISSSPSS 182
G C C CC C C CC C S G S SS
Sbjct: 91 GCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSS 129
>gi|4502873 chloride channel 6 isoform ClC-6a [Homo sapiens]
Length = 869
Score = 34.7 bits (78), Expect = 0.065
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 152 CPGCCCCCCCCCCCC 166
C G CCCC CCCC
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 32.0 bits (71), Expect = 0.42
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 158 CCCCCCCCCCWCCSC 172
C CCCC WCC C
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 154 GCCCCCCCCCCCCCWC 169
GC CCCC CC C
Sbjct: 3 GCRGSLCCCCRWCCCC 18
>gi|12025673 chloride channel 6 isoform ClC-6d [Homo sapiens]
Length = 308
Score = 34.7 bits (78), Expect = 0.065
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 152 CPGCCCCCCCCCCCC 166
C G CCCC CCCC
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 32.0 bits (71), Expect = 0.42
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 158 CCCCCCCCCCWCCSC 172
C CCCC WCC C
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 154 GCCCCCCCCCCCCCWC 169
GC CCCC CC C
Sbjct: 3 GCRGSLCCCCRWCCCC 18
>gi|12025668 chloride channel 6 isoform ClC-6b [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.065
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 152 CPGCCCCCCCCCCCC 166
C G CCCC CCCC
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 32.0 bits (71), Expect = 0.42
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 158 CCCCCCCCCCWCCSC 172
C CCCC WCC C
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 154 GCCCCCCCCCCCCCWC 169
GC CCCC CC C
Sbjct: 3 GCRGSLCCCCRWCCCC 18
>gi|12025671 chloride channel 6 isoform ClC-6c [Homo sapiens]
Length = 353
Score = 34.7 bits (78), Expect = 0.065
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 152 CPGCCCCCCCCCCCC 166
C G CCCC CCCC
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 32.0 bits (71), Expect = 0.42
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 158 CCCCCCCCCCWCCSC 172
C CCCC WCC C
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 154 GCCCCCCCCCCCCCWC 169
GC CCCC CC C
Sbjct: 3 GCRGSLCCCCRWCCCC 18
>gi|13654235 regulator of G-protein signaling 20 isoform b [Homo
sapiens]
Length = 241
Score = 33.9 bits (76), Expect = 0.11
Identities = 13/31 (41%), Positives = 13/31 (41%)
Query: 139 TAGPLGWDGSAGPCPGCCCCCCCCCCCCCWC 169
T G AG CC C CCCC C C
Sbjct: 43 TPGAAPGQPGAGSRGSNACCFCWCCCCSCSC 73
Score = 32.7 bits (73), Expect = 0.25
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 160 CCCCCCCCWCCSCL 173
CC C CCC CSCL
Sbjct: 61 CCFCWCCCCSCSCL 74
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,889,892
Number of Sequences: 37866
Number of extensions: 502562
Number of successful extensions: 7449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 2893
Number of HSP's gapped (non-prelim): 2316
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.