Guide to the Human Genome
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Name: KRTAP5-6 Sequence: fasta or formatted (129aa) NCBI GI: 60099478
Description:

keratin associated protein 5-6

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          2           1
 C cysteine           34.9         45           3
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine            24.0         31           2
 H histidine           0.0          0           0
 I isoleucine          2.3          3           1
 K lysine              5.4          7           1
 L leucine             0.0          0           0
 M methionine          0.8          1           1
 N asparagine          0.0          0           0
 P proline             4.7          6           1
 Q glutamine           3.1          4           1
 R arginine            0.0          0           0
 S serine             18.6         24           2
 T threonine           0.8          1           1
 V valine              3.1          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-6 
KRTAP5-7              0.881   keratin associated protein 5-7 
KRTAP5-8              0.868   keratin associated protein 5-8 
KRTAP5-2              0.815   keratin associated protein 5-2 
KRTAP5-10             0.811   keratin associated protein 5-10 
KRTAP5-1              0.765   keratin associated protein 5-1 
KRTAP5-3              0.758   keratin associated protein 5-3 
KRTAP5-11             0.742   keratin associated protein 5-11 
KRTAP5-5              0.738   keratin associated protein 5-5 
KRTAP5-9              0.662   keratin associated protein 5-9 
KRTAP5-4              0.583   keratin associated protein 5-4 
KRTAP17-1             0.252   keratin associated protein 17-1 
KRTAP10-2             0.245   keratin associated protein 10-2 
KRTAP4-8              0.238   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.238   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.235   keratin associated protein 4-11 
KRTAP10-6             0.235   keratin associated protein 10-6 
KRTAP10-4             0.235   keratin associated protein 10-4 
KRTAP4-8              0.235   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.235   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.235   keratin associated protein 4-3 
KRTAP4-8              0.232   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.228   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.228   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.228   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP10-7             0.228   keratin associated protein 10-7 
KRTAP9-2              0.222   keratin associated protein 9.2 
KRTAP4-9              0.222   keratin associated protein 4-9 
KRTAP4-9              0.219   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.215   PREDICTED: keratin associated protein 4.8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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