CLCN6 2406

Name: CLCN6	Sequence: fasta or formatted (320aa)		NCBI GI: 12025668
Description: chloride channel 6 isoform ClC-6b		Referenced in: Chloride Channels
Other entries for this name: alt prot [353aa] chloride channel 6 isoform ClC-6c alt prot [308aa] chloride channel 6 isoform ClC-6d alt prot [869aa] chloride channel 6 isoform ClC-6a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 14 2 C cysteine 6.2 20 4 D aspartate 2.8 9 1 E glutamate 7.2 23 3 F phenylalanine 6.2 20 2 G glycine 9.4 30 2 H histidine 1.6 5 1 I isoleucine 3.8 12 1 K lysine 4.1 13 2 L leucine 13.4 43 2 M methionine 1.2 4 1 N asparagine 1.9 6 1 P proline 4.4 14 1 Q glutamine 3.1 10 1 R arginine 6.9 22 2 S serine 6.2 20 1 T threonine 3.1 10 1 V valine 9.4 30 2 W tryptophan 2.2 7 1 Y tyrosine 2.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chloride channel 6 isoform ClC-6b CLCN6 0.949 chloride channel 6 isoform ClC-6d CLCN6 0.714 chloride channel 6 isoform ClC-6a CLCN6 0.714 chloride channel 6 isoform ClC-6c CLCN7 0.239 chloride channel 7 isoform b CLCN7 0.239 chloride channel 7 isoform a CLCN1 0.075 chloride channel 1, skeletal muscle CLCN3 0.068 chloride channel 3 isoform e CLCN3 0.068 chloride channel 3 isoform b CLCN2 0.065 chloride channel 2 CLCN4 0.064 chloride channel 4 CLCN5 0.056 chloride channel 5 isoform a CLCN5 0.056 chloride channel 5 isoform a CLCN5 0.056 chloride channel 5 isoform b CLCNKB 0.036 chloride channel Kb CLCNKA 0.036 chloride channel Ka isoform 1 CLCNKA 0.036 chloride channel Ka isoform 2 RGS20 0.017 regulator of G-protein signaling 20 isoform b RGS20 0.017 regulator of G-protein signaling 20 isoform a LOC100131830 0.016 PREDICTED: hypothetical protein LOC100131830 0.016 PREDICTED: hypothetical protein LOC100131830 0.016 PREDICTED: hypothetical protein DNAJC5 0.009 DnaJ (Hsp40) homolog, subfamily C, member 5 DNAJC5B 0.009 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho... TREML4 0.008 triggering receptor expressed on myeloid cells-like ... LOC100293604 0.006 PREDICTED: hypothetical protein LOC100289721 0.006 PREDICTED: hypothetical protein XP_002347280 LOC100287837 0.006 PREDICTED: hypothetical protein XP_002343157 ERBB3 0.006 erbB-3 isoform 1 precursor PCDH10 0.005 protocadherin 10 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.